RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 FBXO11Q86XK2 927 aa19.29■□□□□ 0.68
SMCO4-204ENST00000527149 CCDC82Q8N4S0 544 aa19.29■□□□□ 0.68
SMCO4-204ENST00000527149 TRERF1Q96PN7 1200 aa19.29■□□□□ 0.68
SMCO4-204ENST00000527149 ACAD9Q9H845 621 aa19.29■□□□□ 0.68
SMCO4-204ENST00000527149 ABCB11O95342 1321 aa19.28■□□□□ 0.68
SMCO4-204ENST00000527149 DNAJC25-GNG10A0A024R161 153 aa19.28■□□□□ 0.68
SMCO4-204ENST00000527149 hCG_1642624A0A1W2PR95 340 aa19.28■□□□□ 0.68
SMCO4-204ENST00000527149 STRNO43815 780 aa19.28■□□□□ 0.68
SMCO4-204ENST00000527149 IFNAR1P17181 557 aa19.28■□□□□ 0.68
SMCO4-204ENST00000527149 ADORA2AP29274 412 aa19.28■□□□□ 0.68
SMCO4-204ENST00000527149 FLT3LGP49771 235 aa19.28■□□□□ 0.68
SMCO4-204ENST00000527149 ARHGEF6Q15052 776 aa19.28■□□□□ 0.68
SMCO4-204ENST00000527149 USH1GQ495M9 461 aa19.28■□□□□ 0.68
SMCO4-204ENST00000527149 CCAR1Q8IX12 1150 aaKnown RBP19.28■□□□□ 0.68
SMCO4-204ENST00000527149 IL27Q8NEV9 243 aa19.28■□□□□ 0.68
SMCO4-204ENST00000527149 PIBF1Q8WXW3 757 aa19.28■□□□□ 0.68
SMCO4-204ENST00000527149 GTF3C6Q969F1 213 aa19.28■□□□□ 0.68
SMCO4-204ENST00000527149 RRP36Q96EU6 259 aaKnown RBP19.28■□□□□ 0.68
SMCO4-204ENST00000527149 AMNQ9BXJ7 453 aa19.28■□□□□ 0.68
SMCO4-204ENST00000527149 A1CFQ9NQ94 594 aaKnown RBP19.28■□□□□ 0.68
SMCO4-204ENST00000527149 FBXO40Q9UH90 709 aa19.28■□□□□ 0.68
SMCO4-204ENST00000527149 PTPN22Q9Y2R2 807 aa19.28■□□□□ 0.68
SMCO4-204ENST00000527149 PTCH2Q9Y6C5 1203 aa19.28■□□□□ 0.68
SMCO4-204ENST00000527149 COBLO75128 1261 aa19.27■□□□□ 0.68
SMCO4-204ENST00000527149 IGHA2P01877 340 aa19.27■□□□□ 0.68
SMCO4-204ENST00000527149 HOXC6P09630 235 aa19.27■□□□□ 0.68
SMCO4-204ENST00000527149 FCER1AP12319 257 aa19.27■□□□□ 0.68
SMCO4-204ENST00000527149 SLC4A3P48751 1232 aa19.27■□□□□ 0.68
SMCO4-204ENST00000527149 PRMT2P55345 433 aa19.27■□□□□ 0.68
SMCO4-204ENST00000527149 IRF5Q13568 498 aa19.27■□□□□ 0.68
SMCO4-204ENST00000527149 FGD4Q96M96 766 aa19.27■□□□□ 0.68
SMCO4-204ENST00000527149 MMP19Q99542 508 aa19.27■□□□□ 0.68
SMCO4-204ENST00000527149 NUDT12Q9BQG2 462 aa19.27■□□□□ 0.68
SMCO4-204ENST00000527149 SLKQ9H2G2 1235 aaPredicted RBP19.27■□□□□ 0.68
SMCO4-204ENST00000527149 LIMCH1Q9UPQ0 1083 aa19.27■□□□□ 0.68
SMCO4-204ENST00000527149 IVNS1ABPQ9Y6Y0 642 aa19.27■□□□□ 0.68
SMCO4-204ENST00000527149 CTDNEP1O95476 244 aa19.26■□□□□ 0.67
SMCO4-204ENST00000527149 HOXD10P28358 340 aa19.26■□□□□ 0.67
SMCO4-204ENST00000527149 GHRHRQ02643 423 aa19.26■□□□□ 0.67
SMCO4-204ENST00000527149 MAP2K5Q13163 448 aa19.26■□□□□ 0.67
SMCO4-204ENST00000527149 NECAB1Q8N987 351 aa19.26■□□□□ 0.67
SMCO4-204ENST00000527149 PHKBQ93100 1093 aa19.26■□□□□ 0.67
SMCO4-204ENST00000527149 MCM3APO60318 1980 aa19.25■□□□□ 0.67
SMCO4-204ENST00000527149 ST18O60284 1047 aa19.25■□□□□ 0.67
SMCO4-204ENST00000527149 PKN1Q16512 942 aa19.25■□□□□ 0.67
SMCO4-204ENST00000527149 COL13A1Q5TAT6 717 aaPredicted RBP19.25■□□□□ 0.67
SMCO4-204ENST00000527149 WWC2Q6AWC2 1192 aa19.25■□□□□ 0.67
SMCO4-204ENST00000527149 TYW1BQ6NUM6 668 aa19.25■□□□□ 0.67
SMCO4-204ENST00000527149 FBXO46Q6PJ61 603 aaPredicted RBP19.25■□□□□ 0.67
SMCO4-204ENST00000527149 NPLOC4Q8TAT6 608 aa19.25■□□□□ 0.67
SMCO4-204ENST00000527149 APBA2Q99767 749 aa19.25■□□□□ 0.67
SMCO4-204ENST00000527149 RNF26Q9BY78 433 aaPredicted RBP19.25■□□□□ 0.67
SMCO4-204ENST00000527149 CWC22Q9HCG8 908 aaKnown RBP19.25■□□□□ 0.67
SMCO4-204ENST00000527149 CYP39A1Q9NYL5 469 aa19.25■□□□□ 0.67
SMCO4-204ENST00000527149 SEC63Q9UGP8 760 aaKnown RBP19.25■□□□□ 0.67
SMCO4-204ENST00000527149 PCDHA1Q9Y5I3 950 aa19.25■□□□□ 0.67
SMCO4-204ENST00000527149 V9GY48 417 aaPredicted RBP19.25■□□□□ 0.67
SMCO4-204ENST00000527149 LRRC37A2A6NM11 1700 aa19.25■□□□□ 0.67
SMCO4-204ENST00000527149 ASTN1O14525 1302 aa19.25■□□□□ 0.67
SMCO4-204ENST00000527149 PRPF3O43395 683 aaKnown RBP19.24■□□□□ 0.67
SMCO4-204ENST00000527149 PPFIA3O75145 1194 aa19.24■□□□□ 0.67
SMCO4-204ENST00000527149 PGK2P07205 417 aa19.24■□□□□ 0.67
SMCO4-204ENST00000527149 XRCC5P13010 732 aaKnown RBP19.24■□□□□ 0.67
SMCO4-204ENST00000527149 RGS2P41220 211 aa19.24■□□□□ 0.67
SMCO4-204ENST00000527149 KCTD2Q14681 263 aa19.24■□□□□ 0.67
SMCO4-204ENST00000527149 PKN2Q16513 984 aaKnown RBP19.24■□□□□ 0.67
SMCO4-204ENST00000527149 PFKFB3Q16875 520 aaPredicted RBP19.24■□□□□ 0.67
SMCO4-204ENST00000527149 ZNF792Q3KQV3 632 aa19.24■□□□□ 0.67
SMCO4-204ENST00000527149 SLC30A10Q6XR72 485 aa19.24■□□□□ 0.67
SMCO4-204ENST00000527149 FAM133AQ8N9E0 248 aa19.24■□□□□ 0.67
SMCO4-204ENST00000527149 RGS22Q8NE09 1264 aa19.24■□□□□ 0.67
SMCO4-204ENST00000527149 GPKOWQ92917 476 aaPredicted RBP eCLIP19.24■□□□□ 0.67
SMCO4-204ENST00000527149 SHISA4Q96DD7 197 aa19.24■□□□□ 0.67
SMCO4-204ENST00000527149 MCOLN1Q9GZU1 580 aa19.24■□□□□ 0.67
SMCO4-204ENST00000527149 PFASO15067 1338 aa19.24■□□□□ 0.67
SMCO4-204ENST00000527149 CYP2B6P20813 491 aa19.23■□□□□ 0.67
SMCO4-204ENST00000527149 CCL14Q16627 93 aa19.23■□□□□ 0.67
SMCO4-204ENST00000527149 ANKRD35Q8N283 1001 aa19.23■□□□□ 0.67
SMCO4-204ENST00000527149 TBC1D5Q92609 795 aa19.23■□□□□ 0.67
SMCO4-204ENST00000527149 MRPL11Q9Y3B7 192 aaKnown RBP19.23■□□□□ 0.67
SMCO4-204ENST00000527149 STK36Q9NRP7 1315 aa19.23■□□□□ 0.67
SMCO4-204ENST00000527149 STXBP3O00186 592 aa19.22■□□□□ 0.67
SMCO4-204ENST00000527149 CPLX1O14810 134 aa19.22■□□□□ 0.67
SMCO4-204ENST00000527149 DTNBO60941 627 aa19.22■□□□□ 0.67
SMCO4-204ENST00000527149 SCG2P13521 617 aa19.22■□□□□ 0.67
SMCO4-204ENST00000527149 HSD17B4P51659 736 aa19.22■□□□□ 0.67
SMCO4-204ENST00000527149 RPS6P62753 249 aaKnown RBP19.22■□□□□ 0.67
SMCO4-204ENST00000527149 BAATQ14032 418 aaPredicted RBP19.22■□□□□ 0.67
SMCO4-204ENST00000527149 NSMFQ6X4W1 530 aa19.22■□□□□ 0.67
SMCO4-204ENST00000527149 NSUN7Q8NE18 718 aaKnown RBP19.22■□□□□ 0.67
SMCO4-204ENST00000527149 TRIB2Q92519 343 aa19.22■□□□□ 0.67
SMCO4-204ENST00000527149 ZSCAN31Q96LW9 406 aaPredicted RBP19.22■□□□□ 0.67
SMCO4-204ENST00000527149 SLC26A6Q9BXS9 759 aa19.22■□□□□ 0.67
SMCO4-204ENST00000527149 MAF1Q9H063 256 aa19.22■□□□□ 0.67
SMCO4-204ENST00000527149 SH2B1Q9NRF2 756 aaPredicted RBP19.22■□□□□ 0.67
SMCO4-204ENST00000527149 FLRT1Q9NZU1 646 aa19.22■□□□□ 0.67
SMCO4-204ENST00000527149 COL20A1Q9P218 1284 aa19.22■□□□□ 0.67
SMCO4-204ENST00000527149 RBM27Q9P2N5 1060 aaKnown RBP19.22■□□□□ 0.67
SMCO4-204ENST00000527149 hCG_1984214I3L0E3 225 aa19.21■□□□□ 0.67
SMCO4-204ENST00000527149 ELNP15502 786 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms