RNA–Protein interactions for RNA: ENST00000526506.5

HIF3A-210, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-210ENST00000526506 SLC12A7Q9Y666 1083 aa17.53■□□□□ 0.4
HIF3A-210ENST00000526506 ZNFX1Q9P2E3 1918 aaKnown RBP17.53■□□□□ 0.4
HIF3A-210ENST00000526506 NFIBO00712 420 aa17.52■□□□□ 0.4
HIF3A-210ENST00000526506 CALM1P0DP23 149 aa17.52■□□□□ 0.4
HIF3A-210ENST00000526506 CALM2P0DP24 149 aa17.52■□□□□ 0.4
HIF3A-210ENST00000526506 CALM3P0DP25 149 aa17.52■□□□□ 0.4
HIF3A-210ENST00000526506 CNGA1P29973 690 aa17.52■□□□□ 0.4
HIF3A-210ENST00000526506 USH1GQ495M9 461 aa17.52■□□□□ 0.4
HIF3A-210ENST00000526506 MAMDC4Q6UXC1 1216 aa17.52■□□□□ 0.4
HIF3A-210ENST00000526506 FAM133AQ8N9E0 248 aa17.52■□□□□ 0.4
HIF3A-210ENST00000526506 TRPV1Q8NER1 839 aa17.52■□□□□ 0.4
HIF3A-210ENST00000526506 CLEC4DQ8WXI8 215 aa17.52■□□□□ 0.4
HIF3A-210ENST00000526506 TCEANC2Q96MN5 208 aa17.52■□□□□ 0.4
HIF3A-210ENST00000526506 CYP39A1Q9NYL5 469 aa17.52■□□□□ 0.4
HIF3A-210ENST00000526506 ABCB11O95342 1321 aa17.51■□□□□ 0.39
HIF3A-210ENST00000526506 SYNGAP1Q96PV0 1343 aa17.51■□□□□ 0.39
HIF3A-210ENST00000526506 ZBTB5O15062 677 aa17.51■□□□□ 0.39
HIF3A-210ENST00000526506 MSCO60682 206 aa17.51■□□□□ 0.39
HIF3A-210ENST00000526506 PSMA5P28066 241 aa17.51■□□□□ 0.39
HIF3A-210ENST00000526506 CNTN2Q02246 1040 aa17.51■□□□□ 0.39
HIF3A-210ENST00000526506 BLOC1S2Q6QNY1 142 aa17.51■□□□□ 0.39
HIF3A-210ENST00000526506 FBXO11Q86XK2 927 aa17.51■□□□□ 0.39
HIF3A-210ENST00000526506 MTMR8Q96EF0 704 aa17.51■□□□□ 0.39
HIF3A-210ENST00000526506 FGD4Q96M96 766 aa17.51■□□□□ 0.39
HIF3A-210ENST00000526506 RIOX1Q9H6W3 641 aa17.51■□□□□ 0.39
HIF3A-210ENST00000526506 DDX20Q9UHI6 824 aaKnown RBP17.51■□□□□ 0.39
HIF3A-210ENST00000526506 PLXNA1Q9UIW2 1896 aa17.51■□□□□ 0.39
HIF3A-210ENST00000526506 CNPY2Q9Y2B0 182 aa17.51■□□□□ 0.39
HIF3A-210ENST00000526506 PTPDC1A2A3K4 754 aa17.5■□□□□ 0.39
HIF3A-210ENST00000526506 EIF5BO60841 1220 aaKnown RBP17.5■□□□□ 0.39
HIF3A-210ENST00000526506 FARP2O94887 1054 aaPredicted RBP17.5■□□□□ 0.39
HIF3A-210ENST00000526506 GNAQP50148 359 aa17.5■□□□□ 0.39
HIF3A-210ENST00000526506 FGD1P98174 961 aa17.5■□□□□ 0.39
HIF3A-210ENST00000526506 SLC35G1Q2M3R5 365 aa17.5■□□□□ 0.39
HIF3A-210ENST00000526506 PRAMEF19Q5SWL8 479 aa17.5■□□□□ 0.39
HIF3A-210ENST00000526506 SYNE3Q6ZMZ3 975 aa17.5■□□□□ 0.39
HIF3A-210ENST00000526506 LZTS2Q9BRK4 669 aa17.5■□□□□ 0.39
HIF3A-210ENST00000526506 AMNQ9BXJ7 453 aa17.5■□□□□ 0.39
HIF3A-210ENST00000526506 OGDHLQ9ULD0 1010 aa17.5■□□□□ 0.39
HIF3A-210ENST00000526506 SOWAHBA6NEL2 793 aa17.49■□□□□ 0.39
HIF3A-210ENST00000526506 SEPT4O43236 478 aa17.49■□□□□ 0.39
HIF3A-210ENST00000526506 CYTH3O43739 400 aa17.49■□□□□ 0.39
HIF3A-210ENST00000526506 RXRAP19793 462 aa17.49■□□□□ 0.39
HIF3A-210ENST00000526506 BAATQ14032 418 aaPredicted RBP17.49■□□□□ 0.39
HIF3A-210ENST00000526506 LHX8Q68G74 356 aa17.49■□□□□ 0.39
HIF3A-210ENST00000526506 APOA5Q6Q788 366 aa17.49■□□□□ 0.39
HIF3A-210ENST00000526506 RNF207Q6ZRF8 634 aa17.49■□□□□ 0.39
HIF3A-210ENST00000526506 MICU3Q86XE3 530 aa17.49■□□□□ 0.39
HIF3A-210ENST00000526506 HOMER1Q86YM7 354 aa17.49■□□□□ 0.39
HIF3A-210ENST00000526506 ANKLE1Q8NAG6 615 aa17.49■□□□□ 0.39
HIF3A-210ENST00000526506 RGS22Q8NE09 1264 aa17.49■□□□□ 0.39
HIF3A-210ENST00000526506 PIGSQ96S52 555 aa17.49■□□□□ 0.39
HIF3A-210ENST00000526506 MAF1Q9H063 256 aa17.49■□□□□ 0.39
HIF3A-210ENST00000526506 MRPL11Q9Y3B7 192 aaKnown RBP17.49■□□□□ 0.39
HIF3A-210ENST00000526506 TNRC18O15417 2968 aaPredicted RBP17.49■□□□□ 0.39
HIF3A-210ENST00000526506 ASB14A6NK59 587 aa17.48■□□□□ 0.39
HIF3A-210ENST00000526506 SNAI1O95863 264 aaPredicted RBP17.48■□□□□ 0.39
HIF3A-210ENST00000526506 CPA1P15085 419 aa17.48■□□□□ 0.39
HIF3A-210ENST00000526506 CASTP20810 708 aaKnown RBP17.48■□□□□ 0.39
HIF3A-210ENST00000526506 RPS6KB1P23443 525 aa17.48■□□□□ 0.39
HIF3A-210ENST00000526506 SMARCA1P28370 1054 aa17.48■□□□□ 0.39
HIF3A-210ENST00000526506 RPS6P62753 249 aaKnown RBP17.48■□□□□ 0.39
HIF3A-210ENST00000526506 TRAF1Q13077 416 aa17.48■□□□□ 0.39
HIF3A-210ENST00000526506 SLC30A10Q6XR72 485 aa17.48■□□□□ 0.39
HIF3A-210ENST00000526506 ARMCX2Q7L311 632 aa17.48■□□□□ 0.39
HIF3A-210ENST00000526506 UBE2Q1Q7Z7E8 422 aa17.48■□□□□ 0.39
HIF3A-210ENST00000526506 MCF2L2Q86YR7 1114 aa17.48■□□□□ 0.39
HIF3A-210ENST00000526506 RAB11FIP4Q86YS3 637 aa17.48■□□□□ 0.39
HIF3A-210ENST00000526506 CCDC144CPQ8IYA2 1237 aa17.48■□□□□ 0.39
HIF3A-210ENST00000526506 SPZ1Q9BXG8 430 aa17.48■□□□□ 0.39
HIF3A-210ENST00000526506 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.48■□□□□ 0.39
HIF3A-210ENST00000526506 ADD3Q9UEY8 706 aaKnown RBP17.48■□□□□ 0.39
HIF3A-210ENST00000526506 PNMA6FA0A0J9YX94 578 aa17.47■□□□□ 0.39
HIF3A-210ENST00000526506 PPP1R11O60927 126 aaPredicted RBP17.47■□□□□ 0.39
HIF3A-210ENST00000526506 CALML3P27482 149 aa17.47■□□□□ 0.39
HIF3A-210ENST00000526506 Q6ZUG5 572 aa17.47■□□□□ 0.39
HIF3A-210ENST00000526506 FANCBQ8NB91 859 aa17.47■□□□□ 0.39
HIF3A-210ENST00000526506 ZHX1Q9UKY1 873 aaPredicted RBP17.47■□□□□ 0.39
HIF3A-210ENST00000526506 BRPF3Q9ULD4 1205 aa17.47■□□□□ 0.39
HIF3A-210ENST00000526506 PCDHA1Q9Y5I3 950 aa17.47■□□□□ 0.39
HIF3A-210ENST00000526506 BRCA2P51587 3418 aa17.47■□□□□ 0.39
HIF3A-210ENST00000526506 SMCHD1A6NHR9 2005 aa17.47■□□□□ 0.39
HIF3A-210ENST00000526506 ASTN1O14525 1302 aa17.47■□□□□ 0.39
HIF3A-210ENST00000526506 KLF18A0A0U1RQI7 1052 aa17.46■□□□□ 0.39
HIF3A-210ENST00000526506 ZBTB43O43298 467 aa17.46■□□□□ 0.39
HIF3A-210ENST00000526506 PLEKHA8P1O95397 391 aa17.46■□□□□ 0.39
HIF3A-210ENST00000526506 ZNF865P0CJ78 1059 aaPredicted RBP17.46■□□□□ 0.39
HIF3A-210ENST00000526506 RRP36Q96EU6 259 aaKnown RBP17.46■□□□□ 0.39
HIF3A-210ENST00000526506 PURBQ96QR8 312 aaKnown RBP17.46■□□□□ 0.39
HIF3A-210ENST00000526506 ABHD16BQ9H3Z7 469 aa17.46■□□□□ 0.39
HIF3A-210ENST00000526506 LOC102724159A0A0B4J2E5 919 aa17.45■□□□□ 0.38
HIF3A-210ENST00000526506 AKR1A1P14550 325 aa17.45■□□□□ 0.38
HIF3A-210ENST00000526506 RCAN1P53805 252 aa17.45■□□□□ 0.38
HIF3A-210ENST00000526506 ACVR2BQ13705 512 aa17.45■□□□□ 0.38
HIF3A-210ENST00000526506 PWP2Q15269 919 aaKnown RBP17.45■□□□□ 0.38
HIF3A-210ENST00000526506 ANO1Q5XXA6 986 aa17.45■□□□□ 0.38
HIF3A-210ENST00000526506 TMTC3Q6ZXV5 915 aa17.45■□□□□ 0.38
HIF3A-210ENST00000526506 RUFY3Q7L099 469 aa17.45■□□□□ 0.38
HIF3A-210ENST00000526506 FBXL16Q8N461 479 aa17.45■□□□□ 0.38
HIF3A-210ENST00000526506 SRBD1Q8N5C6 995 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms