RNA–Protein interactions for RNA: ENST00000526477.5

CAPRIN1-203, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-203ENST00000526477 DIS3Q9Y2L1 958 aaKnown RBP27.35■■□□□ 1.97
CAPRIN1-203ENST00000526477 CALM1P0DP23 149 aa27.34■■□□□ 1.97
CAPRIN1-203ENST00000526477 CALM2P0DP24 149 aa27.34■■□□□ 1.97
CAPRIN1-203ENST00000526477 CALM3P0DP25 149 aa27.34■■□□□ 1.97
CAPRIN1-203ENST00000526477 USH1GQ495M9 461 aa27.34■■□□□ 1.97
CAPRIN1-203ENST00000526477 MFSD14CQ5VZR4 134 aa27.34■■□□□ 1.97
CAPRIN1-203ENST00000526477 APOA5Q6Q788 366 aa27.34■■□□□ 1.97
CAPRIN1-203ENST00000526477 CCDC144CPQ8IYA2 1237 aa27.34■■□□□ 1.97
CAPRIN1-203ENST00000526477 CLEC4DQ8WXI8 215 aa27.34■■□□□ 1.97
CAPRIN1-203ENST00000526477 ZSWIM6Q9HCJ5 1215 aa27.34■■□□□ 1.97
CAPRIN1-203ENST00000526477 NFIBO00712 420 aa27.33■■□□□ 1.97
CAPRIN1-203ENST00000526477 PLEKHA8P1O95397 391 aa27.33■■□□□ 1.97
CAPRIN1-203ENST00000526477 KIF5BP33176 963 aa27.33■■□□□ 1.97
CAPRIN1-203ENST00000526477 FGD4Q96M96 766 aa27.33■■□□□ 1.97
CAPRIN1-203ENST00000526477 PIGSQ96S52 555 aa27.33■■□□□ 1.97
CAPRIN1-203ENST00000526477 TM6SF1Q9BZW5 370 aa27.33■■□□□ 1.97
CAPRIN1-203ENST00000526477 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.33■■□□□ 1.971e-6■□□□□ 8.2
CAPRIN1-203ENST00000526477 PAK6Q9NQU5 681 aaPredicted RBP27.33■■□□□ 1.97
CAPRIN1-203ENST00000526477 RPTORQ8N122 1335 aa27.33■■□□□ 1.97
CAPRIN1-203ENST00000526477 LCTP09848 1927 aa27.33■■□□□ 1.97
CAPRIN1-203ENST00000526477 BRCA2P51587 3418 aa27.33■■□□□ 1.97
CAPRIN1-203ENST00000526477 EIF5BO60841 1220 aaKnown RBP27.32■■□□□ 1.96
CAPRIN1-203ENST00000526477 NSMFQ6X4W1 530 aa27.32■■□□□ 1.96
CAPRIN1-203ENST00000526477 RUFY3Q7L099 469 aa27.32■■□□□ 1.96
CAPRIN1-203ENST00000526477 MICU3Q86XE3 530 aa27.32■■□□□ 1.96
CAPRIN1-203ENST00000526477 FBXO11Q86XK2 927 aa27.32■■□□□ 1.96
CAPRIN1-203ENST00000526477 FANCBQ8NB91 859 aa27.32■■□□□ 1.96
CAPRIN1-203ENST00000526477 HMX1Q9NP08 348 aaPredicted RBP27.32■■□□□ 1.96
CAPRIN1-203ENST00000526477 KLF18A0A0U1RQI7 1052 aa27.31■■□□□ 1.96
CAPRIN1-203ENST00000526477 ZBTB5O15062 677 aa27.31■■□□□ 1.96
CAPRIN1-203ENST00000526477 PPP1R11O60927 126 aaPredicted RBP27.31■■□□□ 1.96
CAPRIN1-203ENST00000526477 GJB1P08034 283 aa27.31■■□□□ 1.96
CAPRIN1-203ENST00000526477 CCND3P30281 292 aaPredicted RBP27.31■■□□□ 1.96
CAPRIN1-203ENST00000526477 FGD1P98174 961 aa27.31■■□□□ 1.96
CAPRIN1-203ENST00000526477 CNTN2Q02246 1040 aa27.31■■□□□ 1.96
CAPRIN1-203ENST00000526477 SYNE3Q6ZMZ3 975 aa27.31■■□□□ 1.96
CAPRIN1-203ENST00000526477 FBXL16Q8N461 479 aa27.31■■□□□ 1.96
CAPRIN1-203ENST00000526477 FAM133AQ8N9E0 248 aa27.31■■□□□ 1.96
CAPRIN1-203ENST00000526477 BRF1Q92994 677 aa27.31■■□□□ 1.96
CAPRIN1-203ENST00000526477 AGXT2Q9BYV1 514 aa27.31■■□□□ 1.96
CAPRIN1-203ENST00000526477 CYP39A1Q9NYL5 469 aa27.31■■□□□ 1.96
CAPRIN1-203ENST00000526477 PFASO15067 1338 aa27.31■■□□□ 1.96
CAPRIN1-203ENST00000526477 POTEB2H3BUK9 544 aa27.3■■□□□ 1.96
CAPRIN1-203ENST00000526477 EN2P19622 333 aaPredicted RBP27.3■■□□□ 1.96
CAPRIN1-203ENST00000526477 APOBRQ0VD83 1088 aa27.3■■□□□ 1.96
CAPRIN1-203ENST00000526477 HOMER1Q86YM7 354 aa27.3■■□□□ 1.96
CAPRIN1-203ENST00000526477 SRBD1Q8N5C6 995 aaKnown RBP27.3■■□□□ 1.96
CAPRIN1-203ENST00000526477 TRPV1Q8NER1 839 aa27.3■■□□□ 1.96
CAPRIN1-203ENST00000526477 TINF2Q9BSI4 451 aa27.3■■□□□ 1.96
CAPRIN1-203ENST00000526477 SPZ1Q9BXG8 430 aa27.3■■□□□ 1.96
CAPRIN1-203ENST00000526477 ABCB11O95342 1321 aa27.3■■□□□ 1.96
CAPRIN1-203ENST00000526477 ZBTB43O43298 467 aa27.29■■□□□ 1.96
CAPRIN1-203ENST00000526477 CYBAP13498 195 aa27.29■■□□□ 1.96
CAPRIN1-203ENST00000526477 SMARCA1P28370 1054 aa27.29■■□□□ 1.96
CAPRIN1-203ENST00000526477 GNAQP50148 359 aa27.29■■□□□ 1.96
CAPRIN1-203ENST00000526477 BAATQ14032 418 aaPredicted RBP27.29■■□□□ 1.96
CAPRIN1-203ENST00000526477 CMTR1Q8N1G2 835 aaKnown RBP27.29■■□□□ 1.96
CAPRIN1-203ENST00000526477 DEFB118Q96PH6 123 aa27.29■■□□□ 1.96
CAPRIN1-203ENST00000526477 LZTS2Q9BRK4 669 aa27.29■■□□□ 1.96
CAPRIN1-203ENST00000526477 AMNQ9BXJ7 453 aa27.29■■□□□ 1.96
CAPRIN1-203ENST00000526477 UPF3BQ9BZI7 483 aaKnown RBP27.29■■□□□ 1.96
CAPRIN1-203ENST00000526477 CYP46A1Q9Y6A2 500 aa27.29■■□□□ 1.96
CAPRIN1-203ENST00000526477 SOWAHBA6NEL2 793 aa27.28■■□□□ 1.96
CAPRIN1-203ENST00000526477 GJA8P48165 433 aa27.28■■□□□ 1.96
CAPRIN1-203ENST00000526477 ANAPC15P60006 121 aa27.28■■□□□ 1.96
CAPRIN1-203ENST00000526477 PRAMEF19Q5SWL8 479 aa27.28■■□□□ 1.96
CAPRIN1-203ENST00000526477 TMTC3Q6ZXV5 915 aa27.28■■□□□ 1.96
CAPRIN1-203ENST00000526477 ZNF467Q7Z7K2 595 aaPredicted RBP27.28■■□□□ 1.96
CAPRIN1-203ENST00000526477 U2AF1L4Q8WU68 220 aaKnown RBP27.28■■□□□ 1.96
CAPRIN1-203ENST00000526477 PIBF1Q8WXW3 757 aa27.28■■□□□ 1.96
CAPRIN1-203ENST00000526477 SHISA4Q96DD7 197 aa27.28■■□□□ 1.96
CAPRIN1-203ENST00000526477 PURBQ96QR8 312 aaKnown RBP27.28■■□□□ 1.96
CAPRIN1-203ENST00000526477 MCM3APO60318 1980 aa27.28■■□□□ 1.96
CAPRIN1-203ENST00000526477 ASTN1O14525 1302 aa27.27■■□□□ 1.96
CAPRIN1-203ENST00000526477 MAMDC4Q6UXC1 1216 aa27.27■■□□□ 1.96
CAPRIN1-203ENST00000526477 SLC30A10Q6XR72 485 aa27.27■■□□□ 1.96
CAPRIN1-203ENST00000526477 IL17RAQ96F46 866 aa27.27■■□□□ 1.96
CAPRIN1-203ENST00000526477 PNMA6FA0A0J9YX94 578 aa27.26■■□□□ 1.95
CAPRIN1-203ENST00000526477 PTPDC1A2A3K4 754 aa27.26■■□□□ 1.95
CAPRIN1-203ENST00000526477 GOLGA8AA7E2F4 631 aa27.26■■□□□ 1.95
CAPRIN1-203ENST00000526477 GOLGA8BA8MQT2 603 aa27.26■■□□□ 1.95
CAPRIN1-203ENST00000526477 SGPL1O95470 568 aa27.26■■□□□ 1.95
CAPRIN1-203ENST00000526477 TOB2Q14106 344 aaPredicted RBP27.26■■□□□ 1.95
CAPRIN1-203ENST00000526477 PRPF38BQ5VTL8 546 aaKnown RBP27.26■■□□□ 1.95
CAPRIN1-203ENST00000526477 RNF207Q6ZRF8 634 aa27.26■■□□□ 1.95
CAPRIN1-203ENST00000526477 MSL3Q8N5Y2 521 aaKnown RBP27.26■■□□□ 1.95
CAPRIN1-203ENST00000526477 RGS22Q8NE09 1264 aa27.26■■□□□ 1.95
CAPRIN1-203ENST00000526477 TBC1D5Q92609 795 aa27.26■■□□□ 1.95
CAPRIN1-203ENST00000526477 FAM217BQ9NTX9 383 aaPredicted RBP27.26■■□□□ 1.95
CAPRIN1-203ENST00000526477 MRPL11Q9Y3B7 192 aaKnown RBP27.26■■□□□ 1.95
CAPRIN1-203ENST00000526477 SYNGAP1Q96PV0 1343 aa27.25■■□□□ 1.95
CAPRIN1-203ENST00000526477 SNAI1O95863 264 aaPredicted RBP27.25■■□□□ 1.95
CAPRIN1-203ENST00000526477 RCAN1P53805 252 aa27.25■■□□□ 1.95
CAPRIN1-203ENST00000526477 RPS6P62753 249 aaKnown RBP27.25■■□□□ 1.95
CAPRIN1-203ENST00000526477 RTN1Q16799 776 aa27.25■■□□□ 1.95
CAPRIN1-203ENST00000526477 RBM28Q9NW13 759 aaKnown RBP27.25■■□□□ 1.95
CAPRIN1-203ENST00000526477 NAP1L2Q9ULW6 460 aaPredicted RBP27.25■■□□□ 1.95
CAPRIN1-203ENST00000526477 PCDHA1Q9Y5I3 950 aa27.25■■□□□ 1.95
CAPRIN1-203ENST00000526477 OPLAHO14841 1288 aa27.24■■□□□ 1.95
CAPRIN1-203ENST00000526477 CALML3P27482 149 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms