RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 CCDC144CPQ8IYA2 1237 aa14.34□□□□□ -0.11
CCS-202ENST00000525435 ANKRD35Q8N283 1001 aa14.34□□□□□ -0.11
CCS-202ENST00000525435 DDX11Q96FC9 970 aa14.34□□□□□ -0.11
CCS-202ENST00000525435 PIGSQ96S52 555 aa14.34□□□□□ -0.11
CCS-202ENST00000525435 APBA2Q99767 749 aa14.34□□□□□ -0.11
CCS-202ENST00000525435 MAP3K20Q9NYL2 800 aaKnown RBP14.34□□□□□ -0.11
CCS-202ENST00000525435 SEC63Q9UGP8 760 aaKnown RBP14.34□□□□□ -0.11
CCS-202ENST00000525435 NAP1L2Q9ULW6 460 aaPredicted RBP14.34□□□□□ -0.11
CCS-202ENST00000525435 PTCH2Q9Y6C5 1203 aa14.34□□□□□ -0.11
CCS-202ENST00000525435 PFASO15067 1338 aa14.34□□□□□ -0.11
CCS-202ENST00000525435 A0A0G2JMZ2 1700 aa14.33□□□□□ -0.12
CCS-202ENST00000525435 PLEKHA8P1O95397 391 aa14.33□□□□□ -0.12
CCS-202ENST00000525435 CDC27P30260 824 aa14.33□□□□□ -0.12
CCS-202ENST00000525435 GRK4P32298 578 aa14.33□□□□□ -0.12
CCS-202ENST00000525435 ADD1P35611 737 aaKnown RBP14.33□□□□□ -0.12
CCS-202ENST00000525435 SLC4A3P48751 1232 aa14.33□□□□□ -0.12
CCS-202ENST00000525435 AK2P54819 239 aa14.33□□□□□ -0.12
CCS-202ENST00000525435 OLFML2BQ68BL8 750 aa14.33□□□□□ -0.12
CCS-202ENST00000525435 CPLX2Q6PUV4 134 aaKnown RBP14.33□□□□□ -0.12
CCS-202ENST00000525435 ZNF467Q7Z7K2 595 aaPredicted RBP14.33□□□□□ -0.12
CCS-202ENST00000525435 MSL3Q8N5Y2 521 aaKnown RBP14.33□□□□□ -0.12
CCS-202ENST00000525435 CLEC4DQ8WXI8 215 aa14.33□□□□□ -0.12
CCS-202ENST00000525435 ARMC5Q96C12 935 aa14.33□□□□□ -0.12
CCS-202ENST00000525435 PCDHA1Q9Y5I3 950 aa14.33□□□□□ -0.12
CCS-202ENST00000525435 PARP14Q460N5 1801 aa14.32□□□□□ -0.12
CCS-202ENST00000525435 LOC102724159A0A0B4J2E5 919 aa14.32□□□□□ -0.12
CCS-202ENST00000525435 PFKFB2O60825 505 aa14.32□□□□□ -0.12
CCS-202ENST00000525435 COBLO75128 1261 aa14.32□□□□□ -0.12
CCS-202ENST00000525435 ECM2O94769 699 aaPredicted RBP14.32□□□□□ -0.12
CCS-202ENST00000525435 IGHA2P01877 340 aa14.32□□□□□ -0.12
CCS-202ENST00000525435 IFNAR1P17181 557 aa14.32□□□□□ -0.12
CCS-202ENST00000525435 CYP2B6P20813 491 aa14.32□□□□□ -0.12
CCS-202ENST00000525435 PWP2Q15269 919 aaKnown RBP14.32□□□□□ -0.12
CCS-202ENST00000525435 ZNF792Q3KQV3 632 aa14.32□□□□□ -0.12
CCS-202ENST00000525435 SLC9C1Q4G0N8 1177 aa14.32□□□□□ -0.12
CCS-202ENST00000525435 SLKQ9H2G2 1235 aaPredicted RBP14.32□□□□□ -0.12
CCS-202ENST00000525435 A1CFQ9NQ94 594 aaKnown RBP14.32□□□□□ -0.12
CCS-202ENST00000525435 HOMER2Q9NSB8 354 aa14.32□□□□□ -0.12
CCS-202ENST00000525435 TPCN1Q9ULQ1 816 aa14.32□□□□□ -0.12
CCS-202ENST00000525435 LIMCH1Q9UPQ0 1083 aa14.32□□□□□ -0.12
CCS-202ENST00000525435 V9GY48 417 aaPredicted RBP14.32□□□□□ -0.12
CCS-202ENST00000525435 hCG_1984214I3L0E3 225 aa14.31□□□□□ -0.12
CCS-202ENST00000525435 PRPF3O43395 683 aaKnown RBP14.31□□□□□ -0.12
CCS-202ENST00000525435 ST18O60284 1047 aa14.31□□□□□ -0.12
CCS-202ENST00000525435 HMGCRP04035 888 aa14.31□□□□□ -0.12
CCS-202ENST00000525435 GHRHRQ02643 423 aa14.31□□□□□ -0.12
CCS-202ENST00000525435 NTRK3Q16288 839 aa14.31□□□□□ -0.12
CCS-202ENST00000525435 MUM1L1Q5H9M0 696 aa14.31□□□□□ -0.12
CCS-202ENST00000525435 HOMER1Q86YM7 354 aa14.31□□□□□ -0.12
CCS-202ENST00000525435 RAB11FIP4Q86YS3 637 aa14.31□□□□□ -0.12
CCS-202ENST00000525435 CMTR1Q8N1G2 835 aaKnown RBP14.31□□□□□ -0.12
CCS-202ENST00000525435 ZNF713Q8N859 430 aaPredicted RBP14.31□□□□□ -0.12
CCS-202ENST00000525435 FAM133AQ8N9E0 248 aa14.31□□□□□ -0.12
CCS-202ENST00000525435 ZSCAN31Q96LW9 406 aaPredicted RBP14.31□□□□□ -0.12
CCS-202ENST00000525435 CYP39A1Q9NYL5 469 aa14.31□□□□□ -0.12
CCS-202ENST00000525435 POTEB2H3BUK9 544 aa14.3□□□□□ -0.12
CCS-202ENST00000525435 CPLX1O14810 134 aa14.3□□□□□ -0.12
CCS-202ENST00000525435 PPP1R11O60927 126 aaPredicted RBP14.3□□□□□ -0.12
CCS-202ENST00000525435 CDKL5O76039 1030 aa14.3□□□□□ -0.12
CCS-202ENST00000525435 CAPN2P17655 700 aa14.3□□□□□ -0.12
CCS-202ENST00000525435 MCM2P49736 904 aa14.3□□□□□ -0.12
CCS-202ENST00000525435 UBXN2AP68543 259 aa14.3□□□□□ -0.12
CCS-202ENST00000525435 CCT2P78371 535 aaKnown RBP14.3□□□□□ -0.12
CCS-202ENST00000525435 AKAP17AQ02040 695 aaKnown RBP14.3□□□□□ -0.12
CCS-202ENST00000525435 USH1GQ495M9 461 aa14.3□□□□□ -0.12
CCS-202ENST00000525435 MFSD14CQ5VZR4 134 aa14.3□□□□□ -0.12
CCS-202ENST00000525435 MAMDC4Q6UXC1 1216 aa14.3□□□□□ -0.12
CCS-202ENST00000525435 RNF207Q6ZRF8 634 aa14.3□□□□□ -0.12
CCS-202ENST00000525435 CCDC82Q8N4S0 544 aa14.3□□□□□ -0.12
CCS-202ENST00000525435 MAML3Q96JK9 1138 aa14.3□□□□□ -0.12
CCS-202ENST00000525435 RNF26Q9BY78 433 aaPredicted RBP14.3□□□□□ -0.12
CCS-202ENST00000525435 ADD3Q9UEY8 706 aaKnown RBP14.3□□□□□ -0.12
CCS-202ENST00000525435 NRBP1Q9UHY1 535 aa14.3□□□□□ -0.12
CCS-202ENST00000525435 DOCK3Q8IZD9 2030 aa14.29□□□□□ -0.12
CCS-202ENST00000525435 B4DLN1 442 aa14.29□□□□□ -0.12
CCS-202ENST00000525435 NFIBO00712 420 aa14.29□□□□□ -0.12
CCS-202ENST00000525435 PGK2P07205 417 aa14.29□□□□□ -0.12
CCS-202ENST00000525435 MRPL12P52815 198 aaKnown RBP14.29□□□□□ -0.12
CCS-202ENST00000525435 BAATQ14032 418 aaPredicted RBP14.29□□□□□ -0.12
CCS-202ENST00000525435 NSMFQ6X4W1 530 aa14.29□□□□□ -0.12
CCS-202ENST00000525435 TRIM22Q8IYM9 498 aa14.29□□□□□ -0.12
CCS-202ENST00000525435 FAM177A1Q8N128 213 aaPredicted RBP14.29□□□□□ -0.12
CCS-202ENST00000525435 DNERQ8NFT8 737 aa14.29□□□□□ -0.12
CCS-202ENST00000525435 NPLOC4Q8TAT6 608 aa14.29□□□□□ -0.12
CCS-202ENST00000525435 ABHD8Q96I13 439 aa14.29□□□□□ -0.12
CCS-202ENST00000525435 LARP6Q9BRS8 491 aaKnown RBP14.29□□□□□ -0.12
CCS-202ENST00000525435 GLT8D2Q9H1C3 349 aa14.29□□□□□ -0.12
CCS-202ENST00000525435 SH2B1Q9NRF2 756 aaPredicted RBP14.29□□□□□ -0.12
CCS-202ENST00000525435 CNTNAP5Q8WYK1 1306 aa14.29□□□□□ -0.12
CCS-202ENST00000525435 ASB14A6NK59 587 aa14.28□□□□□ -0.12
CCS-202ENST00000525435 HSD17B4P51659 736 aa14.28□□□□□ -0.12
CCS-202ENST00000525435 RPS6P62753 249 aaKnown RBP14.28□□□□□ -0.12
CCS-202ENST00000525435 SSRP1Q08945 709 aaKnown RBP14.28□□□□□ -0.12
CCS-202ENST00000525435 SCRN1Q12765 414 aa14.28□□□□□ -0.12
CCS-202ENST00000525435 ME3Q16798 604 aa14.28□□□□□ -0.12
CCS-202ENST00000525435 PFKFB3Q16875 520 aaPredicted RBP14.28□□□□□ -0.12
CCS-202ENST00000525435 MAP3K21Q5TCX8 1036 aa14.28□□□□□ -0.12
CCS-202ENST00000525435 TRIB2Q92519 343 aa14.28□□□□□ -0.12
CCS-202ENST00000525435 ZNF333Q96JL9 665 aa14.28□□□□□ -0.12
CCS-202ENST00000525435 MPHOSPH6Q99547 160 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms