RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 COA7Q96BR5 231 aa7.55□□□□□ -1.2
CD44-214ENST00000525211 PURBQ96QR8 312 aaKnown RBP7.55□□□□□ -1.2
CD44-214ENST00000525211 SLF1Q9BQI6 1058 aa7.55□□□□□ -1.2
CD44-214ENST00000525211 PAGR1Q9BTK6 254 aa7.55□□□□□ -1.2
CD44-214ENST00000525211 RANBP17Q9H2T7 1088 aaKnown RBP7.55□□□□□ -1.2
CD44-214ENST00000525211 SH2D4AQ9H788 454 aa7.55□□□□□ -1.2
CD44-214ENST00000525211 SLC38A10Q9HBR0 1119 aa7.55□□□□□ -1.2
CD44-214ENST00000525211 FEM1BQ9UK73 627 aa7.55□□□□□ -1.2
CD44-214ENST00000525211 ZNF214Q9UL59 606 aaPredicted RBP7.55□□□□□ -1.2
CD44-214ENST00000525211 SYNPO2Q9UMS6 1093 aa7.55□□□□□ -1.2
CD44-214ENST00000525211 LIMCH1Q9UPQ0 1083 aa7.55□□□□□ -1.2
CD44-214ENST00000525211 V9GY48 417 aaPredicted RBP7.55□□□□□ -1.2
CD44-214ENST00000525211 A0A0G2JMZ2 1700 aa7.55□□□□□ -1.2
CD44-214ENST00000525211 FOXN1O15353 648 aa7.54□□□□□ -1.2
CD44-214ENST00000525211 CA12O43570 354 aa7.54□□□□□ -1.2
CD44-214ENST00000525211 PLA2G6O60733 806 aa7.54□□□□□ -1.2
CD44-214ENST00000525211 NT5C2P49902 561 aa7.54□□□□□ -1.2
CD44-214ENST00000525211 STAT2P52630 851 aa7.54□□□□□ -1.2
CD44-214ENST00000525211 FOSBP53539 338 aa7.54□□□□□ -1.2
CD44-214ENST00000525211 IRX3P78415 501 aaPredicted RBP7.54□□□□□ -1.2
CD44-214ENST00000525211 SREBF2Q12772 1141 aa7.54□□□□□ -1.2
CD44-214ENST00000525211 IKQ13123 557 aaPredicted RBP7.54□□□□□ -1.2
CD44-214ENST00000525211 CDC37Q16543 378 aaPredicted RBP7.54□□□□□ -1.2
CD44-214ENST00000525211 ASPRV1Q53RT3 343 aa7.54□□□□□ -1.2
CD44-214ENST00000525211 NOM1Q5C9Z4 860 aaKnown RBP7.54□□□□□ -1.2
CD44-214ENST00000525211 OTUD7BQ6GQQ9 843 aa7.54□□□□□ -1.2
CD44-214ENST00000525211 HOMER1Q86YM7 354 aa7.54□□□□□ -1.2
CD44-214ENST00000525211 CPXCR1Q8N123 301 aa7.54□□□□□ -1.2
CD44-214ENST00000525211 TMTC2Q8N394 836 aa7.54□□□□□ -1.2
CD44-214ENST00000525211 CLEC4DQ8WXI8 215 aa7.54□□□□□ -1.2
CD44-214ENST00000525211 GPKOWQ92917 476 aaPredicted RBP eCLIP7.54□□□□□ -1.2
CD44-214ENST00000525211 GTF3C6Q969F1 213 aa7.54□□□□□ -1.2
CD44-214ENST00000525211 MAP3K14Q99558 947 aa7.54□□□□□ -1.2
CD44-214ENST00000525211 MOV10L1Q9BXT6 1211 aaKnown RBP7.54□□□□□ -1.2
CD44-214ENST00000525211 SLKQ9H2G2 1235 aaPredicted RBP7.54□□□□□ -1.2
CD44-214ENST00000525211 EFCC1Q9HA90 598 aa7.54□□□□□ -1.2
CD44-214ENST00000525211 SLC45A1Q9Y2W3 748 aa7.54□□□□□ -1.2
CD44-214ENST00000525211 NFIBO00712 420 aa7.53□□□□□ -1.2
CD44-214ENST00000525211 TRIM66O15016 1216 aa7.53□□□□□ -1.2
CD44-214ENST00000525211 TLR2O60603 784 aa7.53□□□□□ -1.2
CD44-214ENST00000525211 EIF5BO60841 1220 aaKnown RBP7.53□□□□□ -1.2
CD44-214ENST00000525211 HSPA8P11142 646 aaKnown RBP7.53□□□□□ -1.2
CD44-214ENST00000525211 IFNAR1P17181 557 aa7.53□□□□□ -1.2
CD44-214ENST00000525211 FECHP22830 423 aa7.53□□□□□ -1.2
CD44-214ENST00000525211 INHBEP58166 350 aa7.53□□□□□ -1.2
CD44-214ENST00000525211 ERVK-9P63128 1117 aa7.53□□□□□ -1.2
CD44-214ENST00000525211 ERVK-24P63145 666 aa7.53□□□□□ -1.2
CD44-214ENST00000525211 CUL4AQ13619 759 aa7.53□□□□□ -1.2
CD44-214ENST00000525211 USH1GQ495M9 461 aa7.53□□□□□ -1.2
CD44-214ENST00000525211 GPATCH4Q5T3I0 446 aaKnown RBP7.53□□□□□ -1.2
CD44-214ENST00000525211 WWC2Q6AWC2 1192 aa7.53□□□□□ -1.2
CD44-214ENST00000525211 FAM160B2Q86V87 743 aa7.53□□□□□ -1.2
CD44-214ENST00000525211 PRPF38AQ8NAV1 312 aaKnown RBP7.53□□□□□ -1.2
CD44-214ENST00000525211 CTCFLQ8NI51 663 aaPredicted RBP7.53□□□□□ -1.2
CD44-214ENST00000525211 SNX21Q969T3 373 aa7.53□□□□□ -1.2
CD44-214ENST00000525211 DDX11Q96FC9 970 aa7.53□□□□□ -1.2
CD44-214ENST00000525211 FGD4Q96M96 766 aa7.53□□□□□ -1.2
CD44-214ENST00000525211 SPZ1Q9BXG8 430 aa7.53□□□□□ -1.2
CD44-214ENST00000525211 SLC26A6Q9BXS9 759 aa7.53□□□□□ -1.2
CD44-214ENST00000525211 MORF4L1Q9UBU8 362 aa7.53□□□□□ -1.2
CD44-214ENST00000525211 ASTN1O14525 1302 aa7.52□□□□□ -1.2
CD44-214ENST00000525211 DOCK3Q8IZD9 2030 aa7.52□□□□□ -1.2
CD44-214ENST00000525211 PTPDC1A2A3K4 754 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 GPR25O00155 361 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 STXBP3O00186 592 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 EDIL3O43854 480 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 FMNL1O95466 1100 aaPredicted RBP7.52□□□□□ -1.21
CD44-214ENST00000525211 HSPA1AP0DMV8 641 aaKnown RBP7.52□□□□□ -1.21
CD44-214ENST00000525211 HSPA1BP0DMV9 641 aaKnown RBP7.52□□□□□ -1.21
CD44-214ENST00000525211 CALM1P0DP23 149 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 CALM2P0DP24 149 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 CALM3P0DP25 149 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 PLS1Q14651 629 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 ANKRD1Q15327 319 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 NPY5RQ15761 445 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 PPP4R3BQ5MIZ7 849 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 SYNE3Q6ZMZ3 975 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 SMARCC2Q8TAQ2 1214 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 CD99L2Q8TCZ2 262 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 CHURC1Q8WUH1 139 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 ZNF296Q8WUU4 475 aaPredicted RBP7.52□□□□□ -1.21
CD44-214ENST00000525211 TRIM47Q96LD4 638 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 PARK7Q99497 189 aaKnown RBP7.52□□□□□ -1.21
CD44-214ENST00000525211 SPATC1LQ9H0A9 340 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 ZFYVE28Q9HCC9 887 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 HOMER2Q9NSB8 354 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 HOXC10Q9NYD6 342 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 COL20A1Q9P218 1284 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 GABRQQ9UN88 632 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 RABGAP1Q9Y3P9 1069 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 RBM19Q9Y4C8 960 aaKnown RBP7.52□□□□□ -1.21
CD44-214ENST00000525211 PLXNB2O15031 1838 aa7.52□□□□□ -1.21
CD44-214ENST00000525211 HTTP42858 3142 aa7.51□□□□□ -1.21
CD44-214ENST00000525211 PNMA6FA0A0J9YX94 578 aa7.51□□□□□ -1.21
CD44-214ENST00000525211 K7ELQ4 463 aaPredicted RBP7.51□□□□□ -1.21
CD44-214ENST00000525211 ZBTB5O15062 677 aa7.51□□□□□ -1.21
CD44-214ENST00000525211 PRPF3O43395 683 aaKnown RBP7.51□□□□□ -1.21
CD44-214ENST00000525211 DHX16O60231 1041 aaKnown RBP7.51□□□□□ -1.21
CD44-214ENST00000525211 ST18O60284 1047 aa7.51□□□□□ -1.21
CD44-214ENST00000525211 COBLO75128 1261 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms