RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 NPAS3Q8IXF0 933 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 ARL6IP6Q8N6S5 226 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 ZSCAN1Q8NBB4 408 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 OR2W6PQ8NHA6 318 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 DEPTORQ8TB45 409 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 SLC35G2Q8TBE7 412 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 HDAC2Q92769 488 aaKnown RBP5.26□□□□□ -1.57
CD44-213ENST00000525209 PMEPA1Q969W9 287 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 DDX11Q96FC9 970 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 CCDC34Q96HJ3 373 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 RSRC1Q96IZ7 334 aaKnown RBP5.26□□□□□ -1.57
CD44-213ENST00000525209 ZMAT2Q96NC0 199 aaKnown RBP5.26□□□□□ -1.57
CD44-213ENST00000525209 NECAB3Q96P71 396 aaPredicted RBP5.26□□□□□ -1.57
CD44-213ENST00000525209 TSEN34Q9BSV6 310 aaKnown RBP5.26□□□□□ -1.57
CD44-213ENST00000525209 XPO4Q9C0E2 1151 aaKnown RBP5.26□□□□□ -1.57
CD44-213ENST00000525209 MIR1-1HGQ9H1L0 117 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 ZFYVE1Q9HBF4 777 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 NMRK2Q9NPI5 230 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 HELLSQ9NRZ9 838 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 PGPEP1Q9NXJ5 209 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 PPARGC1AQ9UBK2 798 aaKnown RBP5.26□□□□□ -1.57
CD44-213ENST00000525209 STK17AQ9UEE5 414 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 PCDHB5Q9Y5E4 795 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 SNX5Q9Y5X3 404 aa5.26□□□□□ -1.57
CD44-213ENST00000525209 A0A1W2PQU0 124 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 TRIM75PA6NK02 468 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 A6NNZ2 444 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 TTLL8A6PVC2 850 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 M0R2C6 588 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 AGRPO00253 132 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 TPP1O14773 563 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 KHNYNO15037 678 aaKnown RBP5.25□□□□□ -1.57
CD44-213ENST00000525209 OPA1O60313 960 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 MAFKO60675 156 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 CTNND1O60716 968 aaKnown RBP5.25□□□□□ -1.57
CD44-213ENST00000525209 INMTO95050 263 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 ZBED1O96006 694 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 HRGP04196 525 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 IDEP14735 1019 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 LORP23490 312 aaPredicted RBP5.25□□□□□ -1.57
CD44-213ENST00000525209 GALNSP34059 522 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 DEKP35659 375 aaKnown RBP5.25□□□□□ -1.57
CD44-213ENST00000525209 SNX16P57768 344 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 RELBQ01201 579 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 ODF1Q14990 250 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 TLR1Q15399 786 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 TERF2Q15554 542 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 ZC3H12AQ5D1E8 599 aaKnown RBP5.25□□□□□ -1.57
CD44-213ENST00000525209 PEAR1Q5VY43 1037 aaPredicted RBP5.25□□□□□ -1.57
CD44-213ENST00000525209 IQSEC1Q6DN90 963 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 HIBCHQ6NVY1 386 aaPredicted RBP5.25□□□□□ -1.57
CD44-213ENST00000525209 SLFN12Q8IYM2 578 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 C7orf61Q8IZ16 206 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 TAB3Q8N5C8 712 aaPredicted RBP5.25□□□□□ -1.57
CD44-213ENST00000525209 MYCT1Q8N699 235 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 SLC7A14Q8TBB6 771 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 AFAP1L1Q8TED9 768 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 TBC1D31Q96DN5 1066 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 TAAR9Q96RI9 348 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 SEC62Q99442 399 aaKnown RBP5.25□□□□□ -1.57
CD44-213ENST00000525209 FAM167BQ9BTA0 163 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 ZCCHC17Q9NP64 241 aaKnown RBP5.25□□□□□ -1.57
CD44-213ENST00000525209 CABP1Q9NZU7 370 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 LRCH1Q9Y2L9 728 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 PCDHB14Q9Y5E9 798 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 KCNMB2Q9Y691 235 aa5.25□□□□□ -1.57
CD44-213ENST00000525209 ANKRD18BA2A2Z9 1011 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 LRRC10BA6NIK2 292 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 TRIM64CA6NLI5 447 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 MEIS3P2A8K0S8 358 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 DDX58O95786 925 aaKnown RBP5.24□□□□□ -1.57
CD44-213ENST00000525209 IL2RAP01589 272 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 JMJD7P0C870 316 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 GYS1P13807 737 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 KRT20P35900 424 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 SCNN1BP51168 640 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 SUMO1P63165 101 aaKnown RBP5.24□□□□□ -1.57
CD44-213ENST00000525209 FAPQ12884 760 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 MTA1Q13330 715 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 KLF1Q13351 362 aaPredicted RBP5.24□□□□□ -1.57
CD44-213ENST00000525209 DCTN1Q14203 1278 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 LRRFIP1Q32MZ4 808 aaKnown RBP5.24□□□□□ -1.57
CD44-213ENST00000525209 CCDC158Q5M9N0 1113 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 GPATCH4Q5T3I0 446 aaKnown RBP5.24□□□□□ -1.57
CD44-213ENST00000525209 Q6ZVU0 165 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 GPR155Q7Z3F1 870 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 BRAPQ7Z569 592 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 FGD2Q7Z6J4 655 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 ANKRD13BQ86YJ7 626 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 ZNF784Q8NCA9 323 aaPredicted RBP5.24□□□□□ -1.57
CD44-213ENST00000525209 C1orf162Q8NEQ5 155 aaPredicted RBP5.24□□□□□ -1.57
CD44-213ENST00000525209 ATP6V1E2Q96A05 226 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 SH3KBP1Q96B97 665 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 FAXDC2Q96IV6 333 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 INSM2Q96T92 566 aaPredicted RBP5.24□□□□□ -1.57
CD44-213ENST00000525209 NUDT16L1Q9BRJ7 211 aaKnown RBP5.24□□□□□ -1.57
CD44-213ENST00000525209 SLC26A6Q9BXS9 759 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 ANTXR1Q9H6X2 564 aa5.24□□□□□ -1.57
CD44-213ENST00000525209 ZNF395Q9H8N7 513 aaPredicted RBP5.24□□□□□ -1.57
CD44-213ENST00000525209 LATS2Q9NRM7 1088 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms