RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 NECTIN1Q15223 517 aa14.3□□□□□ -0.12
CHKA-203ENST00000525155 MUM1L1Q5H9M0 696 aa14.3□□□□□ -0.12
CHKA-203ENST00000525155 RRP12Q5JTH9 1297 aaKnown RBP14.3□□□□□ -0.12
CHKA-203ENST00000525155 FAM109BQ6ICB4 259 aaPredicted RBP14.3□□□□□ -0.12
CHKA-203ENST00000525155 RCSD1Q6JBY9 416 aa14.3□□□□□ -0.12
CHKA-203ENST00000525155 RALYLQ86SE5 291 aaKnown RBP14.3□□□□□ -0.12
CHKA-203ENST00000525155 RNF180Q86T96 592 aa14.3□□□□□ -0.12
CHKA-203ENST00000525155 IQCA1Q86XH1 822 aa14.3□□□□□ -0.12
CHKA-203ENST00000525155 TBC1D10CQ8IV04 446 aa14.3□□□□□ -0.12
CHKA-203ENST00000525155 CCDC144CPQ8IYA2 1237 aa14.3□□□□□ -0.12
CHKA-203ENST00000525155 CHST13Q8NET6 341 aa14.3□□□□□ -0.12
CHKA-203ENST00000525155 FAM161BQ96MY7 647 aa14.3□□□□□ -0.12
CHKA-203ENST00000525155 TSEN34Q9BSV6 310 aaKnown RBP14.3□□□□□ -0.12
CHKA-203ENST00000525155 A1CFQ9NQ94 594 aaKnown RBP14.3□□□□□ -0.12
CHKA-203ENST00000525155 HOMER2Q9NSB8 354 aa14.3□□□□□ -0.12
CHKA-203ENST00000525155 TCP11L1Q9NUJ3 509 aa14.3□□□□□ -0.12
CHKA-203ENST00000525155 ZHX1Q9UKY1 873 aaPredicted RBP14.3□□□□□ -0.12
CHKA-203ENST00000525155 FAM184BQ9ULE4 1060 aa14.3□□□□□ -0.12
CHKA-203ENST00000525155 CNPY2Q9Y2B0 182 aa14.3□□□□□ -0.12
CHKA-203ENST00000525155 ZNFX1Q9P2E3 1918 aaKnown RBP14.3□□□□□ -0.12
CHKA-203ENST00000525155 UNC80Q8N2C7 3258 aa14.3□□□□□ -0.12
CHKA-203ENST00000525155 CDH23Q9H251 3354 aa14.3□□□□□ -0.12
CHKA-203ENST00000525155 EYSQ5T1H1 3165 aa14.3□□□□□ -0.12
CHKA-203ENST00000525155 SLC27A2O14975 620 aa14.29□□□□□ -0.12
CHKA-203ENST00000525155 PQBP1O60828 265 aaKnown RBP14.29□□□□□ -0.12
CHKA-203ENST00000525155 DUSP11O75319 330 aaKnown RBP14.29□□□□□ -0.12
CHKA-203ENST00000525155 CCDC144BQ3MJ40 725 aa14.29□□□□□ -0.12
CHKA-203ENST00000525155 CREB3L3Q68CJ9 461 aa14.29□□□□□ -0.12
CHKA-203ENST00000525155 ARMCX2Q7L311 632 aa14.29□□□□□ -0.12
CHKA-203ENST00000525155 ANKRD33Q7Z3H0 272 aa14.29□□□□□ -0.12
CHKA-203ENST00000525155 ANKRD35Q8N283 1001 aa14.29□□□□□ -0.12
CHKA-203ENST00000525155 NCOA7Q8NI08 942 aa14.29□□□□□ -0.12
CHKA-203ENST00000525155 TTC14Q96N46 770 aa14.29□□□□□ -0.12
CHKA-203ENST00000525155 UPF3AQ9H1J1 476 aaKnown RBP14.29□□□□□ -0.12
CHKA-203ENST00000525155 PRR12Q9ULL5 1215 aa14.29□□□□□ -0.12
CHKA-203ENST00000525155 E7EWF7 191 aa14.28□□□□□ -0.12
CHKA-203ENST00000525155 CLTBP09497 229 aa14.28□□□□□ -0.12
CHKA-203ENST00000525155 SLC1A4P43007 532 aa14.28□□□□□ -0.12
CHKA-203ENST00000525155 GJA9P57773 515 aa14.28□□□□□ -0.12
CHKA-203ENST00000525155 NKX3-2P78367 333 aa14.28□□□□□ -0.12
CHKA-203ENST00000525155 SART3Q15020 963 aaKnown RBP14.28□□□□□ -0.12
CHKA-203ENST00000525155 TSGA10IPQ3SY00 556 aa14.28□□□□□ -0.12
CHKA-203ENST00000525155 C16orf59Q7L2K0 433 aa14.28□□□□□ -0.12
CHKA-203ENST00000525155 TRERF1Q96PN7 1200 aa14.28□□□□□ -0.12
CHKA-203ENST00000525155 MTA3Q9BTC8 594 aa14.28□□□□□ -0.12
CHKA-203ENST00000525155 TTYH1Q9H313 450 aaPredicted RBP14.28□□□□□ -0.12
CHKA-203ENST00000525155 SEMA6BQ9H3T3 888 aa14.28□□□□□ -0.12
CHKA-203ENST00000525155 ABHD16BQ9H3Z7 469 aa14.28□□□□□ -0.12
CHKA-203ENST00000525155 PDGFCQ9NRA1 345 aa14.28□□□□□ -0.12
CHKA-203ENST00000525155 PRKAG2Q9UGJ0 569 aa14.28□□□□□ -0.12
CHKA-203ENST00000525155 STX8Q9UNK0 236 aa14.28□□□□□ -0.12
CHKA-203ENST00000525155 CUL9Q8IWT3 2517 aa14.28□□□□□ -0.12
CHKA-203ENST00000525155 VCANP13611 3396 aa14.27□□□□□ -0.12
CHKA-203ENST00000525155 GRIN2DO15399 1336 aa14.27□□□□□ -0.12
CHKA-203ENST00000525155 KDM4AO75164 1064 aa14.27□□□□□ -0.13
CHKA-203ENST00000525155 HMGB1P09429 215 aaKnown RBP14.27□□□□□ -0.13
CHKA-203ENST00000525155 CST5P28325 142 aaPredicted RBP14.27□□□□□ -0.13
CHKA-203ENST00000525155 HSPA4P34932 840 aa14.27□□□□□ -0.13
CHKA-203ENST00000525155 SLC16A2P36021 539 aa14.27□□□□□ -0.13
CHKA-203ENST00000525155 STAT2P52630 851 aa14.27□□□□□ -0.13
CHKA-203ENST00000525155 TAPT1Q6NXT6 567 aa14.27□□□□□ -0.13
CHKA-203ENST00000525155 CCDC174Q6PII3 467 aa14.27□□□□□ -0.13
CHKA-203ENST00000525155 FAM160B2Q86V87 743 aa14.27□□□□□ -0.13
CHKA-203ENST00000525155 DGKHQ86XP1 1220 aa14.27□□□□□ -0.13
CHKA-203ENST00000525155 CHURC1Q8WUH1 139 aa14.27□□□□□ -0.13
CHKA-203ENST00000525155 TOX2Q96NM4 488 aa14.27□□□□□ -0.13
CHKA-203ENST00000525155 UBAC1Q9BSL1 405 aa14.27□□□□□ -0.13
CHKA-203ENST00000525155 USP26Q9BXU7 913 aa14.27□□□□□ -0.13
CHKA-203ENST00000525155 RNF146Q9NTX7 359 aa14.27□□□□□ -0.13
CHKA-203ENST00000525155 FBXO40Q9UH90 709 aa14.27□□□□□ -0.13
CHKA-203ENST00000525155 TBX21Q9UL17 535 aa14.27□□□□□ -0.13
CHKA-203ENST00000525155 GNEQ9Y223 722 aaKnown RBP14.27□□□□□ -0.13
CHKA-203ENST00000525155 PRUNE2Q8WUY3 3088 aa14.27□□□□□ -0.13
CHKA-203ENST00000525155 NEDD4P46934 1319 aa14.26□□□□□ -0.13
CHKA-203ENST00000525155 ERICH2A1L162 156 aa14.26□□□□□ -0.13
CHKA-203ENST00000525155 DLL1O00548 723 aa14.26□□□□□ -0.13
CHKA-203ENST00000525155 ASGR1P07306 291 aa14.26□□□□□ -0.13
CHKA-203ENST00000525155 FDX1P10109 184 aa14.26□□□□□ -0.13
CHKA-203ENST00000525155 BEX3Q00994 111 aa14.26□□□□□ -0.13
CHKA-203ENST00000525155 BTNL9Q6UXG8 535 aa14.26□□□□□ -0.13
CHKA-203ENST00000525155 KCNB2Q92953 911 aa14.26□□□□□ -0.13
CHKA-203ENST00000525155 TMEM47Q9BQJ4 181 aa14.26□□□□□ -0.13
CHKA-203ENST00000525155 ACAD9Q9H845 621 aa14.26□□□□□ -0.13
CHKA-203ENST00000525155 STARD7Q9NQZ5 370 aa14.26□□□□□ -0.13
CHKA-203ENST00000525155 TMEM39AQ9NV64 488 aa14.26□□□□□ -0.13
CHKA-203ENST00000525155 CYP39A1Q9NYL5 469 aa14.26□□□□□ -0.13
CHKA-203ENST00000525155 ZSWIM5Q9P217 1185 aa14.26□□□□□ -0.13
CHKA-203ENST00000525155 MTMR7Q9Y216 660 aa14.26□□□□□ -0.13
CHKA-203ENST00000525155 MYH8P13535 1937 aa14.25□□□□□ -0.13
CHKA-203ENST00000525155 ELP1O95163 1332 aa14.25□□□□□ -0.13
CHKA-203ENST00000525155 MOXD2PA6NHM9 499 aa14.25□□□□□ -0.13
CHKA-203ENST00000525155 B4E1Z4 1266 aa14.25□□□□□ -0.13
CHKA-203ENST00000525155 C6orf222P0C671 652 aaPredicted RBP14.25□□□□□ -0.13
CHKA-203ENST00000525155 ALAS1P13196 640 aa14.25□□□□□ -0.13
CHKA-203ENST00000525155 SMPD1P17405 629 aa14.25□□□□□ -0.13
CHKA-203ENST00000525155 PSMA5P28066 241 aa14.25□□□□□ -0.13
CHKA-203ENST00000525155 MCM5P33992 734 aa14.25□□□□□ -0.13
CHKA-203ENST00000525155 ZSCAN10Q96SZ4 725 aaPredicted RBP14.25□□□□□ -0.13
CHKA-203ENST00000525155 CDX2Q99626 313 aaPredicted RBP14.25□□□□□ -0.13
CHKA-203ENST00000525155 RANBP17Q9H2T7 1088 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms