RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 IFNKQ9P0W0 207 aa17.29■□□□□ 0.36
BEST1-204ENST00000524926 SHTN1A0MZ66 631 aa17.29■□□□□ 0.36
BEST1-204ENST00000524926 TMEM232C9JQI7 657 aa17.29■□□□□ 0.36
BEST1-204ENST00000524926 NFKBIEO00221 500 aa17.29■□□□□ 0.36
BEST1-204ENST00000524926 FKBP1CQ5VVH2 108 aa17.29■□□□□ 0.36
BEST1-204ENST00000524926 GSDMAQ96QA5 445 aa17.29■□□□□ 0.36
BEST1-204ENST00000524926 DISC1Q9NRI5 854 aa17.29■□□□□ 0.36
BEST1-204ENST00000524926 BMP3P12645 472 aa17.28■□□□□ 0.36
BEST1-204ENST00000524926 ATP1A3P13637 1013 aa17.28■□□□□ 0.36
BEST1-204ENST00000524926 TECP42680 631 aa17.28■□□□□ 0.36
BEST1-204ENST00000524926 ECE1P42892 770 aa17.28■□□□□ 0.36
BEST1-204ENST00000524926 SNAP25P60880 206 aa17.28■□□□□ 0.36
BEST1-204ENST00000524926 RRAGBQ5VZM2 374 aa17.28■□□□□ 0.36
BEST1-204ENST00000524926 POTEDQ86YR6 584 aa17.28■□□□□ 0.36
BEST1-204ENST00000524926 PLIN2Q99541 437 aa17.28■□□□□ 0.36
BEST1-204ENST00000524926 XPO4Q9C0E2 1151 aaKnown RBP17.28■□□□□ 0.36
BEST1-204ENST00000524926 HSD3B7Q9H2F3 369 aa17.28■□□□□ 0.36
BEST1-204ENST00000524926 ARHGEF10LQ9HCE6 1279 aa17.28■□□□□ 0.36
BEST1-204ENST00000524926 FANCLQ9NW38 375 aa17.28■□□□□ 0.36
BEST1-204ENST00000524926 SCAF8Q9UPN6 1271 aaKnown RBP17.28■□□□□ 0.36
BEST1-204ENST00000524926 CCDC144BQ3MJ40 725 aa17.28■□□□□ 0.36
BEST1-204ENST00000524926 FAM83AQ86UY5 434 aa17.28■□□□□ 0.36
BEST1-204ENST00000524926 TXKP42681 527 aa17.27■□□□□ 0.36
BEST1-204ENST00000524926 CLK2P49760 499 aaKnown RBP17.27■□□□□ 0.36
BEST1-204ENST00000524926 FANCCQ00597 558 aa17.27■□□□□ 0.36
BEST1-204ENST00000524926 ORC2Q13416 577 aaPredicted RBP17.27■□□□□ 0.36
BEST1-204ENST00000524926 FILIP1Q7Z7B0 1213 aa17.27■□□□□ 0.36
BEST1-204ENST00000524926 AK8Q96MA6 479 aa17.27■□□□□ 0.36
BEST1-204ENST00000524926 MTRQ99707 1265 aa17.27■□□□□ 0.36
BEST1-204ENST00000524926 CCSER1Q9C0I3 900 aa17.27■□□□□ 0.36
BEST1-204ENST00000524926 TDP2O95551 362 aa17.27■□□□□ 0.35
BEST1-204ENST00000524926 SERPINC1P01008 464 aa17.27■□□□□ 0.35
BEST1-204ENST00000524926 FMR1Q06787 632 aaKnown RBP eCLIP17.27■□□□□ 0.35
BEST1-204ENST00000524926 CUL4BQ13620 913 aa17.27■□□□□ 0.35
BEST1-204ENST00000524926 CALCRLQ16602 461 aa17.27■□□□□ 0.35
BEST1-204ENST00000524926 SYDE2Q5VT97 1194 aa17.27■□□□□ 0.35
BEST1-204ENST00000524926 ACER1Q8TDN7 264 aa17.27■□□□□ 0.35
BEST1-204ENST00000524926 ZBTB21Q9ULJ3 1066 aa17.27■□□□□ 0.35
BEST1-204ENST00000524926 CD2APQ9Y5K6 639 aa17.27■□□□□ 0.35
BEST1-204ENST00000524926 FER1L6Q2WGJ9 1857 aa17.26■□□□□ 0.35
BEST1-204ENST00000524926 USP17L15C9J2P7 530 aa17.26■□□□□ 0.35
BEST1-204ENST00000524926 USP17L13C9JLJ4 530 aa17.26■□□□□ 0.35
BEST1-204ENST00000524926 USP17L11C9JVI0 530 aa17.26■□□□□ 0.35
BEST1-204ENST00000524926 USP17L18D6R9N7 530 aa17.26■□□□□ 0.35
BEST1-204ENST00000524926 USP17L22D6RA61 530 aa17.26■□□□□ 0.35
BEST1-204ENST00000524926 USP17L17D6RBQ6 530 aa17.26■□□□□ 0.35
BEST1-204ENST00000524926 USP17L19D6RCP7 530 aa17.26■□□□□ 0.35
BEST1-204ENST00000524926 USP17L20D6RJB6 530 aa17.26■□□□□ 0.35
BEST1-204ENST00000524926 GTPBP6O43824 516 aaPredicted RBP17.26■□□□□ 0.35
BEST1-204ENST00000524926 USP17L24Q0WX57 530 aa17.26■□□□□ 0.35
BEST1-204ENST00000524926 USP17L6PQ6QN14 398 aa17.26■□□□□ 0.35
BEST1-204ENST00000524926 CABP7Q86V35 215 aa17.26■□□□□ 0.35
BEST1-204ENST00000524926 TRMT44Q8IYL2 757 aaKnown RBP17.26■□□□□ 0.35
BEST1-204ENST00000524926 ZBED3Q96IU2 234 aaPredicted RBP17.26■□□□□ 0.35
BEST1-204ENST00000524926 AMNQ9BXJ7 453 aa17.26■□□□□ 0.35
BEST1-204ENST00000524926 TBC1D12O60347 775 aa17.26■□□□□ 0.35
BEST1-204ENST00000524926 LRMPQ12912 555 aa17.26■□□□□ 0.35
BEST1-204ENST00000524926 HSP90AA4PQ58FG1 418 aa17.26■□□□□ 0.35
BEST1-204ENST00000524926 KLHL10Q6JEL2 608 aa17.26■□□□□ 0.35
BEST1-204ENST00000524926 GLT8D2Q9H1C3 349 aa17.26■□□□□ 0.35
BEST1-204ENST00000524926 NFE2L3Q9Y4A8 694 aa17.26■□□□□ 0.35
BEST1-204ENST00000524926 UTRNP46939 3433 aa17.25■□□□□ 0.35
BEST1-204ENST00000524926 SLC37A4O43826 429 aa17.25■□□□□ 0.35
BEST1-204ENST00000524926 EDIL3O43854 480 aa17.25■□□□□ 0.35
BEST1-204ENST00000524926 USH1GQ495M9 461 aa17.25■□□□□ 0.35
BEST1-204ENST00000524926 C17orf53Q8N3J3 647 aaPredicted RBP17.25■□□□□ 0.35
BEST1-204ENST00000524926 ENOX1Q8TC92 643 aaKnown RBP17.25■□□□□ 0.35
BEST1-204ENST00000524926 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.25■□□□□ 0.35
BEST1-204ENST00000524926 PYCARDQ9ULZ3 195 aa17.25■□□□□ 0.35
BEST1-204ENST00000524926 PSDA5PKW4 1024 aaPredicted RBP17.25■□□□□ 0.35
BEST1-204ENST00000524926 UBASH3AP57075 661 aa17.25■□□□□ 0.35
BEST1-204ENST00000524926 RASSF7Q02833 373 aa17.25■□□□□ 0.35
BEST1-204ENST00000524926 NAALADL2Q58DX5 795 aa17.25■□□□□ 0.35
BEST1-204ENST00000524926 FBXO11Q86XK2 927 aa17.25■□□□□ 0.35
BEST1-204ENST00000524926 SMYD4Q8IYR2 804 aaPredicted RBP17.25■□□□□ 0.35
BEST1-204ENST00000524926 MTMR9Q96QG7 549 aa17.25■□□□□ 0.35
BEST1-204ENST00000524926 GOPCQ9HD26 462 aa17.25■□□□□ 0.35
BEST1-204ENST00000524926 SYNPO2Q9UMS6 1093 aa17.25■□□□□ 0.35
BEST1-204ENST00000524926 TMX2Q9Y320 296 aa17.25■□□□□ 0.35
BEST1-204ENST00000524926 GJA3Q9Y6H8 435 aa17.25■□□□□ 0.35
BEST1-204ENST00000524926 BRCA1P38398 1863 aaKnown RBP17.24■□□□□ 0.35
BEST1-204ENST00000524926 EGFRP00533 1210 aa17.24■□□□□ 0.35
BEST1-204ENST00000524926 CDK11BP21127 795 aaKnown RBP17.24■□□□□ 0.35
BEST1-204ENST00000524926 ERCC5P28715 1186 aaPredicted RBP17.24■□□□□ 0.35
BEST1-204ENST00000524926 CACTINQ8WUQ7 758 aaKnown RBP17.24■□□□□ 0.35
BEST1-204ENST00000524926 CAP2P40123 477 aa17.23■□□□□ 0.35
BEST1-204ENST00000524926 RASA3Q14644 834 aa17.23■□□□□ 0.35
BEST1-204ENST00000524926 NOLC1Q14978 699 aaKnown RBP eCLIP17.23■□□□□ 0.35
BEST1-204ENST00000524926 ZYXQ15942 572 aaKnown RBP17.23■□□□□ 0.35
BEST1-204ENST00000524926 SGIP1Q9BQI5 828 aa17.23■□□□□ 0.35
BEST1-204ENST00000524926 DDX25Q9UHL0 483 aaKnown RBP17.23■□□□□ 0.35
BEST1-204ENST00000524926 ARFGEF1Q9Y6D6 1849 aa17.23■□□□□ 0.35
BEST1-204ENST00000524926 MARCH6O60337 910 aa17.23■□□□□ 0.35
BEST1-204ENST00000524926 RPN1P04843 607 aaKnown RBP17.23■□□□□ 0.35
BEST1-204ENST00000524926 CD44P16070 742 aaKnown RBP17.23■□□□□ 0.35
BEST1-204ENST00000524926 STAT2P52630 851 aa17.23■□□□□ 0.35
BEST1-204ENST00000524926 TMEM266Q2M3C6 531 aa17.23■□□□□ 0.35
BEST1-204ENST00000524926 KIAA1755Q5JYT7 1200 aa17.23■□□□□ 0.35
BEST1-204ENST00000524926 PPP4R3AQ6IN85 833 aa17.23■□□□□ 0.35
BEST1-204ENST00000524926 BTNL9Q6UXG8 535 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms