RNA–Protein interactions for RNA: ENST00000523215.1

ERGIC1-211, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 3,621 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-211ENST00000523215 NR5A1Q13285 461 aa11.7□□□□□ -0.54
ERGIC1-211ENST00000523215 ZCWPW2Q504Y3 356 aa11.7□□□□□ -0.54
ERGIC1-211ENST00000523215 SPDYCQ5MJ68 293 aa11.7□□□□□ -0.54
ERGIC1-211ENST00000523215 YTHDF3Q7Z739 585 aaKnown RBP11.7□□□□□ -0.54
ERGIC1-211ENST00000523215 CCDC155Q8N6L0 562 aa11.7□□□□□ -0.54
ERGIC1-211ENST00000523215 A1CFQ9NQ94 594 aaKnown RBP11.7□□□□□ -0.54
ERGIC1-211ENST00000523215 KCNJ14Q9UNX9 436 aa11.7□□□□□ -0.54
ERGIC1-211ENST00000523215 H7C1D1 291 aa11.7□□□□□ -0.54
ERGIC1-211ENST00000523215 USP49Q70CQ1 688 aa11.7□□□□□ -0.54
ERGIC1-211ENST00000523215 SRLQ86TD4 932 aa11.7□□□□□ -0.54
ERGIC1-211ENST00000523215 DUSP9Q99956 384 aaKnown RBP11.7□□□□□ -0.54
ERGIC1-211ENST00000523215 FRMD3A2A2Y4 597 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 HNRNPH2P55795 449 aaKnown RBP11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 RAD51AP2Q09MP3 1159 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 PTPN21Q16825 1174 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 TMCO3Q6UWJ1 677 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 MICALL1Q8N3F8 863 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 MBOAT7Q96N66 472 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 SIK3Q9Y2K2 1263 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 PPARAQ07869 468 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 UBE4AQ14139 1066 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 KRT31Q15323 416 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 NOM1Q5C9Z4 860 aaKnown RBP11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 SPECC1Q5M775 1068 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 SYNE3Q6ZMZ3 975 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 IGSF22Q8N9C0 903 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 CARD6Q9BX69 1037 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 SLC26A6Q9BXS9 759 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 SAMSN1Q9NSI8 373 aaKnown RBP11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 ANKRD33BA6NCL7 494 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 TEX33O43247 280 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 CASQ1P31415 396 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 ACTN2P35609 894 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 SWT1Q5T5J6 900 aaKnown RBP11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 SLC51AQ86UW1 340 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 SDR42E1Q8WUS8 393 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 SNRNP27Q8WVK2 155 aaKnown RBP11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 AK8Q96MA6 479 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 CDCA7Q9BWT1 371 aaPredicted RBP11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 HAUS4Q9H6D7 363 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 ADAM21Q9UKJ8 722 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 USP20Q9Y2K6 914 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 FRMD4BQ9Y2L6 1034 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 FER1L6Q2WGJ9 1857 aa11.69□□□□□ -0.54
ERGIC1-211ENST00000523215 KLRK1P26718 216 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 LMOD1P29536 600 aaPredicted RBP11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 RBM5P52756 815 aaKnown RBP eCLIP11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 TRDNQ13061 729 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 ZFYVE27Q5T4F4 411 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 CYP26C1Q6V0L0 522 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 MIGA1Q8NAN2 632 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 C3orf20Q8ND61 904 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 CNNM3Q8NE01 707 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 NAPBQ9H115 298 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 LOC102724428A0A0B4J2F2 783 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 IGKV6D-41A0A0C4DH26 115 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 hCG_1984214I3L0E3 225 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 SNHG28P0DPA3 235 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 CLK2P49760 499 aaKnown RBP11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 SIK1P57059 783 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 PPP4CP60510 307 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 HDXQ7Z353 690 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 FNBP4Q8N3X1 1017 aaPredicted RBP11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 ZNF713Q8N859 430 aaPredicted RBP11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 MTMR8Q96EF0 704 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 ZSCAN10Q96SZ4 725 aaPredicted RBP11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 CDC5LQ99459 802 aaKnown RBP11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 IFIT3O14879 490 aaKnown RBP11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 MAP3K12Q12852 859 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 GRM4Q14833 912 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 OLFM4Q6UX06 510 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 BARGINQ6ZT62 677 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 CRYGNQ8WXF5 182 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 DHTKD1Q96HY7 919 aaPredicted RBP11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 FBXL5Q9UKA1 691 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 HPCAL4Q9UM19 191 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 SLC4A4Q9Y6R1 1079 aa11.68□□□□□ -0.54
ERGIC1-211ENST00000523215 SMC2O95347 1197 aa11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 ST5P78524 1137 aa11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 GOLGA8FQ08AF8 430 aa11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 GOLGA8DPQ0D2H9 430 aa11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 NFIL3Q16649 462 aa11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 RTN1Q16799 776 aa11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 GRAMD1CQ8IYS0 662 aa11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 CTCFLQ8NI51 663 aaPredicted RBP11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 TRMT1Q9NXH9 659 aaKnown RBP11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 SLC12A7Q9Y666 1083 aa11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 A0A0G2JMZ2 1700 aa11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 LRRC37A2A6NM11 1700 aa11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 CYP2D7A0A087X1C5 515 aa11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 SOWAHDA6NJG2 315 aa11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 CHMP4BP1P59074 171 aa11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 DNAJC21Q5F1R6 531 aaKnown RBP11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 CENPPQ6IPU0 288 aa11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 MFSD6Q6ZSS7 791 aa11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 SSC5DA1L4H1 1573 aa11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 ANXA13P27216 316 aa11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 OAS2P29728 719 aaKnown RBP11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 KRT2P35908 639 aa11.67□□□□□ -0.54
ERGIC1-211ENST00000523215 COPB1P53618 953 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms