RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 TSEN34Q9BSV6 310 aaKnown RBP17.78■□□□□ 0.44
PCM1-218ENST00000523055 ISY1Q9ULR0 285 aaKnown RBP17.78■□□□□ 0.44
PCM1-218ENST00000523055 SYNPO2Q9UMS6 1093 aa17.78■□□□□ 0.44
PCM1-218ENST00000523055 RAD50Q92878 1312 aa17.77■□□□□ 0.44
PCM1-218ENST00000523055 BMP3P12645 472 aa17.77■□□□□ 0.44
PCM1-218ENST00000523055 BMP1P13497 986 aa17.77■□□□□ 0.44
PCM1-218ENST00000523055 CDK7P50613 346 aa17.77■□□□□ 0.44
PCM1-218ENST00000523055 IRX5P78411 483 aaPredicted RBP17.77■□□□□ 0.44
PCM1-218ENST00000523055 PTH1RQ03431 593 aa17.77■□□□□ 0.44
PCM1-218ENST00000523055 KCTD1Q719H9 257 aa17.77■□□□□ 0.44
PCM1-218ENST00000523055 ZKSCAN3Q9BRR0 538 aa17.77■□□□□ 0.44
PCM1-218ENST00000523055 STARD7Q9NQZ5 370 aa17.77■□□□□ 0.44
PCM1-218ENST00000523055 LCTP09848 1927 aa17.77■□□□□ 0.43
PCM1-218ENST00000523055 SYNRGQ9UMZ2 1314 aa17.76■□□□□ 0.43
PCM1-218ENST00000523055 MYADML2A6NDP7 307 aa17.76■□□□□ 0.43
PCM1-218ENST00000523055 DCDC2CA8MYV0 355 aa17.76■□□□□ 0.43
PCM1-218ENST00000523055 TMEM232C9JQI7 657 aa17.76■□□□□ 0.43
PCM1-218ENST00000523055 AKR1A1P14550 325 aa17.76■□□□□ 0.43
PCM1-218ENST00000523055 CSF2RAP15509 400 aa17.76■□□□□ 0.43
PCM1-218ENST00000523055 RCSD1Q6JBY9 416 aa17.76■□□□□ 0.43
PCM1-218ENST00000523055 RIOX2Q8IUF8 465 aa17.76■□□□□ 0.43
PCM1-218ENST00000523055 PRPF38AQ8NAV1 312 aaKnown RBP17.76■□□□□ 0.43
PCM1-218ENST00000523055 TMEM47Q9BQJ4 181 aa17.76■□□□□ 0.43
PCM1-218ENST00000523055 DIS3Q9Y2L1 958 aaKnown RBP17.76■□□□□ 0.43
PCM1-218ENST00000523055 RIPK3Q9Y572 518 aa17.76■□□□□ 0.43
PCM1-218ENST00000523055 B4E1Z4 1266 aa17.75■□□□□ 0.43
PCM1-218ENST00000523055 ACRP10323 421 aa17.75■□□□□ 0.43
PCM1-218ENST00000523055 STAT3P40763 770 aa17.75■□□□□ 0.43
PCM1-218ENST00000523055 SLC1A4P43007 532 aa17.75■□□□□ 0.43
PCM1-218ENST00000523055 ZNF365Q70YC5 407 aa17.75■□□□□ 0.43
PCM1-218ENST00000523055 CPXCR1Q8N123 301 aa17.75■□□□□ 0.43
PCM1-218ENST00000523055 GMCL1Q96IK5 515 aa17.75■□□□□ 0.43
PCM1-218ENST00000523055 RNF41Q9H4P4 317 aaPredicted RBP17.75■□□□□ 0.43
PCM1-218ENST00000523055 CXXC1Q9P0U4 656 aaPredicted RBP17.75■□□□□ 0.43
PCM1-218ENST00000523055 FEM1BQ9UK73 627 aa17.75■□□□□ 0.43
PCM1-218ENST00000523055 TAF6LQ9Y6J9 622 aa17.75■□□□□ 0.43
PCM1-218ENST00000523055 SYNGAP1Q96PV0 1343 aa17.74■□□□□ 0.43
PCM1-218ENST00000523055 MOXD2PA6NHM9 499 aa17.74■□□□□ 0.43
PCM1-218ENST00000523055 SGSM2O43147 1006 aa17.74■□□□□ 0.43
PCM1-218ENST00000523055 KDM4AO75164 1064 aa17.74■□□□□ 0.43
PCM1-218ENST00000523055 PCP11498 1178 aaKnown RBP17.74■□□□□ 0.43
PCM1-218ENST00000523055 SLC4A3P48751 1232 aa17.74■□□□□ 0.43
PCM1-218ENST00000523055 PPIGQ13427 754 aaKnown RBP eCLIP17.74■□□□□ 0.435e-7■□□□□ 9.2
PCM1-218ENST00000523055 KCNA10Q16322 511 aa17.74■□□□□ 0.43
PCM1-218ENST00000523055 IMMTQ16891 758 aaKnown RBP17.74■□□□□ 0.43
PCM1-218ENST00000523055 SNRNP48Q6IEG0 339 aaKnown RBP17.74■□□□□ 0.43
PCM1-218ENST00000523055 MMP19Q99542 508 aa17.74■□□□□ 0.43
PCM1-218ENST00000523055 SLC38A10Q9HBR0 1119 aa17.74■□□□□ 0.43
PCM1-218ENST00000523055 RAVER2Q9HCJ3 691 aaKnown RBP17.74■□□□□ 0.43
PCM1-218ENST00000523055 TCP11L1Q9NUJ3 509 aa17.74■□□□□ 0.43
PCM1-218ENST00000523055 YBX2Q9Y2T7 364 aaKnown RBP17.74■□□□□ 0.43
PCM1-218ENST00000523055 PRRC2BQ5JSZ5 2229 aaKnown RBP17.74■□□□□ 0.43
PCM1-218ENST00000523055 GBF1Q92538 1859 aa17.74■□□□□ 0.43
PCM1-218ENST00000523055 ADCY6O43306 1168 aa17.73■□□□□ 0.43
PCM1-218ENST00000523055 SLC25A27O95847 323 aa17.73■□□□□ 0.43
PCM1-218ENST00000523055 IGFBP4P22692 258 aa17.73■□□□□ 0.43
PCM1-218ENST00000523055 STAT2P52630 851 aa17.73■□□□□ 0.43
PCM1-218ENST00000523055 SNAP25P60880 206 aa17.73■□□□□ 0.43
PCM1-218ENST00000523055 NUP133Q8WUM0 1156 aa17.73■□□□□ 0.43
PCM1-218ENST00000523055 RUFY2Q8WXA3 655 aa17.73■□□□□ 0.43
PCM1-218ENST00000523055 ESR2Q92731 530 aa17.73■□□□□ 0.43
PCM1-218ENST00000523055 CCDC136Q96JN2 1154 aa17.73■□□□□ 0.43
PCM1-218ENST00000523055 TEX13BQ9BXU2 312 aa17.73■□□□□ 0.43
PCM1-218ENST00000523055 TRANK1O15050 2925 aa17.73■□□□□ 0.43
PCM1-218ENST00000523055 FRMPD2Q68DX3 1309 aaPredicted RBP17.73■□□□□ 0.43
PCM1-218ENST00000523055 SNAI1O95863 264 aaPredicted RBP17.72■□□□□ 0.43
PCM1-218ENST00000523055 TOP1P11387 765 aaKnown RBP17.72■□□□□ 0.43
PCM1-218ENST00000523055 TFF2Q03403 129 aa17.72■□□□□ 0.43
PCM1-218ENST00000523055 IKQ13123 557 aaPredicted RBP17.72■□□□□ 0.43
PCM1-218ENST00000523055 CCDC96Q2M329 555 aa17.72■□□□□ 0.43
PCM1-218ENST00000523055 PPP4R3BQ5MIZ7 849 aa17.72■□□□□ 0.43
PCM1-218ENST00000523055 TTBK2Q6IQ55 1244 aa17.72■□□□□ 0.43
PCM1-218ENST00000523055 C1QTNF1Q9BXJ1 281 aa17.72■□□□□ 0.43
PCM1-218ENST00000523055 NKX2-4Q9H2Z4 354 aa17.72■□□□□ 0.43
PCM1-218ENST00000523055 CTNNA3Q9UI47 895 aa17.72■□□□□ 0.43
PCM1-218ENST00000523055 ELP1O95163 1332 aa17.72■□□□□ 0.43
PCM1-218ENST00000523055 MUC6Q6W4X9 2439 aa17.72■□□□□ 0.43
PCM1-218ENST00000523055 CYP21A2P08686 494 aa17.72■□□□□ 0.43
PCM1-218ENST00000523055 CST5P28325 142 aaPredicted RBP17.72■□□□□ 0.43
PCM1-218ENST00000523055 FAM126BQ8IXS8 530 aa17.72■□□□□ 0.43
PCM1-218ENST00000523055 HERVK_113Q902F9 699 aa17.72■□□□□ 0.43
PCM1-218ENST00000523055 ZSWIM5Q9P217 1185 aa17.72■□□□□ 0.43
PCM1-218ENST00000523055 ARIH1Q9Y4X5 557 aaPredicted RBP17.72■□□□□ 0.43
PCM1-218ENST00000523055 ZNF536O15090 1300 aa17.71■□□□□ 0.43
PCM1-218ENST00000523055 ZBED4O75132 1171 aa17.71■□□□□ 0.43
PCM1-218ENST00000523055 SLC16A2P36021 539 aa17.71■□□□□ 0.43
PCM1-218ENST00000523055 PSRC1Q6PGN9 363 aaPredicted RBP17.71■□□□□ 0.43
PCM1-218ENST00000523055 DCAF4Q8WV16 495 aa17.71■□□□□ 0.43
PCM1-218ENST00000523055 LRFN3Q9BTN0 628 aa17.71■□□□□ 0.43
PCM1-218ENST00000523055 PPP1R12CQ9BZL4 782 aa17.71■□□□□ 0.43
PCM1-218ENST00000523055 EPHX3Q9H6B9 360 aa17.71■□□□□ 0.43
PCM1-218ENST00000523055 HOMER2Q9NSB8 354 aa17.71■□□□□ 0.43
PCM1-218ENST00000523055 PRR12Q9ULL5 1215 aa17.71■□□□□ 0.43
PCM1-218ENST00000523055 ATP2A1O14983 1001 aa17.7■□□□□ 0.42
PCM1-218ENST00000523055 PDHBP11177 359 aa17.7■□□□□ 0.42
PCM1-218ENST00000523055 KCNQ1P51787 676 aa17.7■□□□□ 0.42
PCM1-218ENST00000523055 KCTD2Q14681 263 aa17.7■□□□□ 0.42
PCM1-218ENST00000523055 RAB30Q15771 203 aa17.7■□□□□ 0.42
PCM1-218ENST00000523055 CCDC174Q6PII3 467 aa17.7■□□□□ 0.42
PCM1-218ENST00000523055 FAM160B2Q86V87 743 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms