RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 LRIT3Q3SXY7 679 aa12.05□□□□□ -0.48
CTNNA1-235ENST00000522730 NUP133Q8WUM0 1156 aa12.05□□□□□ -0.48
CTNNA1-235ENST00000522730 FGD4Q96M96 766 aa12.05□□□□□ -0.48
CTNNA1-235ENST00000522730 RNF41Q9H4P4 317 aaPredicted RBP12.05□□□□□ -0.48
CTNNA1-235ENST00000522730 PDLIM7Q9NR12 457 aa12.05□□□□□ -0.48
CTNNA1-235ENST00000522730 PTPDC1A2A3K4 754 aa12.04□□□□□ -0.48
CTNNA1-235ENST00000522730 ASB14A6NK59 587 aa12.04□□□□□ -0.48
CTNNA1-235ENST00000522730 DYNC1LI2O43237 492 aaPredicted RBP12.04□□□□□ -0.48
CTNNA1-235ENST00000522730 ADCY6O43306 1168 aa12.04□□□□□ -0.48
CTNNA1-235ENST00000522730 CLTBP09497 229 aa12.04□□□□□ -0.48
CTNNA1-235ENST00000522730 GOLGA8HP0CJ92 632 aa12.04□□□□□ -0.48
CTNNA1-235ENST00000522730 RAG1P15918 1043 aa12.04□□□□□ -0.48
CTNNA1-235ENST00000522730 BEX3Q00994 111 aa12.04□□□□□ -0.48
CTNNA1-235ENST00000522730 BAATQ14032 418 aaPredicted RBP12.04□□□□□ -0.48
CTNNA1-235ENST00000522730 TICAM2Q86XR7 235 aa12.04□□□□□ -0.48
CTNNA1-235ENST00000522730 FAM133AQ8N9E0 248 aa12.04□□□□□ -0.48
CTNNA1-235ENST00000522730 ESR2Q92731 530 aa12.04□□□□□ -0.48
CTNNA1-235ENST00000522730 FAM161BQ96MY7 647 aa12.04□□□□□ -0.48
CTNNA1-235ENST00000522730 TSEN34Q9BSV6 310 aaKnown RBP12.04□□□□□ -0.48
CTNNA1-235ENST00000522730 OSBPL3Q9H4L5 887 aa12.04□□□□□ -0.48
CTNNA1-235ENST00000522730 TCP11L1Q9NUJ3 509 aa12.04□□□□□ -0.48
CTNNA1-235ENST00000522730 FRMPD3Q5JV73 1810 aa12.04□□□□□ -0.48
CTNNA1-235ENST00000522730 PLXNA1Q9UIW2 1896 aa12.04□□□□□ -0.48
CTNNA1-235ENST00000522730 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 DCDC2CA8MYV0 355 aa12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 HIP1O00291 1037 aa12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 KDM4AO75164 1064 aa12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 ICAM1P05362 532 aa12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 ASGR1P07306 291 aa12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 PTGS1P23219 599 aa12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 CALML3P27482 149 aa12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 SNX17Q15036 470 aa12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 C9orf50Q5SZB4 431 aa12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 PCSK9Q8NBP7 692 aaKnown RBP12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 SLC17A8Q8NDX2 589 aa12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 KLHDC9Q8NEP7 349 aa12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 GLT1D1Q96MS3 346 aa12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 TTC14Q96N46 770 aa12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 UBA5Q9GZZ9 404 aa12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 AP5M1Q9H0R1 490 aa12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 RANBP17Q9H2T7 1088 aaKnown RBP12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 CPVLQ9H3G5 476 aa12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 PDGFCQ9NRA1 345 aa12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 CYP39A1Q9NYL5 469 aa12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 NEDD4P46934 1319 aa12.03□□□□□ -0.48
CTNNA1-235ENST00000522730 COL6A3P12111 3177 aa12.02□□□□□ -0.48
CTNNA1-235ENST00000522730 MOXD2PA6NHM9 499 aa12.02□□□□□ -0.49
CTNNA1-235ENST00000522730 B4E1Z4 1266 aa12.02□□□□□ -0.49
CTNNA1-235ENST00000522730 NFIBO00712 420 aa12.02□□□□□ -0.49
CTNNA1-235ENST00000522730 DHX16O60231 1041 aaKnown RBP12.02□□□□□ -0.49
CTNNA1-235ENST00000522730 PDHBP11177 359 aa12.02□□□□□ -0.49
CTNNA1-235ENST00000522730 ITGB8P26012 769 aa12.02□□□□□ -0.49
CTNNA1-235ENST00000522730 NOVP48745 357 aa12.02□□□□□ -0.49
CTNNA1-235ENST00000522730 GJA9P57773 515 aa12.02□□□□□ -0.49
CTNNA1-235ENST00000522730 IMMTQ16891 758 aaKnown RBP12.02□□□□□ -0.49
CTNNA1-235ENST00000522730 TMEM63BQ5T3F8 832 aa12.02□□□□□ -0.49
CTNNA1-235ENST00000522730 C1orf53Q5VUE5 145 aa12.02□□□□□ -0.49
CTNNA1-235ENST00000522730 BTNL9Q6UXG8 535 aa12.02□□□□□ -0.49
CTNNA1-235ENST00000522730 KIAA1211Q6ZU35 1233 aa12.02□□□□□ -0.49
CTNNA1-235ENST00000522730 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.02□□□□□ -0.49
CTNNA1-235ENST00000522730 FBXO16Q8IX29 292 aaPredicted RBP12.02□□□□□ -0.49
CTNNA1-235ENST00000522730 VAT1LQ9HCJ6 419 aa12.02□□□□□ -0.49
CTNNA1-235ENST00000522730 PCP11498 1178 aaKnown RBP12.01□□□□□ -0.49
CTNNA1-235ENST00000522730 SMPD1P17405 629 aa12.01□□□□□ -0.49
CTNNA1-235ENST00000522730 PDE4AP27815 886 aa12.01□□□□□ -0.49
CTNNA1-235ENST00000522730 ZNF543Q08ER8 600 aa12.01□□□□□ -0.49
CTNNA1-235ENST00000522730 FAAP100Q0VG06 881 aa12.01□□□□□ -0.49
CTNNA1-235ENST00000522730 USH1GQ495M9 461 aa12.01□□□□□ -0.49
CTNNA1-235ENST00000522730 CCSAPQ6IQ19 270 aaPredicted RBP12.01□□□□□ -0.49
CTNNA1-235ENST00000522730 CXCL17Q6UXB2 119 aa12.01□□□□□ -0.49
CTNNA1-235ENST00000522730 IQCA1Q86XH1 822 aa12.01□□□□□ -0.49
CTNNA1-235ENST00000522730 KATNBL1Q9H079 304 aa12.01□□□□□ -0.49
CTNNA1-235ENST00000522730 KAT14Q9H8E8 782 aa12.01□□□□□ -0.49
CTNNA1-235ENST00000522730 ZSWIM5Q9P217 1185 aa12.01□□□□□ -0.49
CTNNA1-235ENST00000522730 CTNNA3Q9UI47 895 aa12.01□□□□□ -0.49
CTNNA1-235ENST00000522730 KIAA0355O15063 1070 aa12□□□□□ -0.49
CTNNA1-235ENST00000522730 NEFLP07196 543 aa12□□□□□ -0.49
CTNNA1-235ENST00000522730 VASPP50552 380 aaPredicted RBP12□□□□□ -0.49
CTNNA1-235ENST00000522730 EPHB4P54760 987 aa12□□□□□ -0.49
CTNNA1-235ENST00000522730 FSCN1Q16658 493 aaKnown RBP12□□□□□ -0.49
CTNNA1-235ENST00000522730 IQSEC1Q6DN90 963 aa12□□□□□ -0.49
CTNNA1-235ENST00000522730 GPR153Q6NV75 609 aa12□□□□□ -0.49
CTNNA1-235ENST00000522730 RNF207Q6ZRF8 634 aa12□□□□□ -0.49
CTNNA1-235ENST00000522730 TLK2Q86UE8 772 aa12□□□□□ -0.49
CTNNA1-235ENST00000522730 PNMA1Q8ND90 353 aa12□□□□□ -0.49
CTNNA1-235ENST00000522730 ZSCAN10Q96SZ4 725 aaPredicted RBP12□□□□□ -0.49
CTNNA1-235ENST00000522730 UPF3AQ9H1J1 476 aaKnown RBP12□□□□□ -0.49
CTNNA1-235ENST00000522730 MTMR10Q9NXD2 777 aa12□□□□□ -0.49
CTNNA1-235ENST00000522730 ADD3Q9UEY8 706 aaKnown RBP12□□□□□ -0.49
CTNNA1-235ENST00000522730 ASTN1O14525 1302 aa12□□□□□ -0.49
CTNNA1-235ENST00000522730 ZMYM6O95789 1325 aa12□□□□□ -0.49
CTNNA1-235ENST00000522730 A0A0U1RQG5 324 aaPredicted RBP11.99□□□□□ -0.49
CTNNA1-235ENST00000522730 ARVCFO00192 962 aa11.99□□□□□ -0.49
CTNNA1-235ENST00000522730 ZEB2O60315 1214 aa11.99□□□□□ -0.49
CTNNA1-235ENST00000522730 ALDH5A1P51649 535 aaPredicted RBP11.99□□□□□ -0.49
CTNNA1-235ENST00000522730 CHMP4BP1P59074 171 aa11.99□□□□□ -0.49
CTNNA1-235ENST00000522730 FPGSQ05932 587 aa11.99□□□□□ -0.49
CTNNA1-235ENST00000522730 PDE4DQ08499 809 aa11.99□□□□□ -0.49
CTNNA1-235ENST00000522730 CCDC178Q5BJE1 867 aa11.99□□□□□ -0.49
CTNNA1-235ENST00000522730 TAPT1Q6NXT6 567 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms