RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 COL9A3Q14050 684 aaPredicted RBP25.53■■□□□ 1.68
HOXA3-205ENST00000522456 ANO1Q5XXA6 986 aa25.53■■□□□ 1.68
HOXA3-205ENST00000522456 CATIPQ7Z7H3 387 aa25.53■■□□□ 1.68
HOXA3-205ENST00000522456 CHST13Q8NET6 341 aa25.53■■□□□ 1.68
HOXA3-205ENST00000522456 CPVLQ9H3G5 476 aa25.53■■□□□ 1.68
HOXA3-205ENST00000522456 PRKAG2Q9UGJ0 569 aa25.53■■□□□ 1.68
HOXA3-205ENST00000522456 FBXO40Q9UH90 709 aa25.53■■□□□ 1.68
HOXA3-205ENST00000522456 ALAS1P13196 640 aa25.52■■□□□ 1.68
HOXA3-205ENST00000522456 ADCK5Q3MIX3 580 aa25.52■■□□□ 1.68
HOXA3-205ENST00000522456 NFXL1Q6ZNB6 911 aa25.52■■□□□ 1.68
HOXA3-205ENST00000522456 TMTC2Q8N394 836 aa25.52■■□□□ 1.68
HOXA3-205ENST00000522456 DDX11Q96FC9 970 aa25.52■■□□□ 1.68
HOXA3-205ENST00000522456 MAML3Q96JK9 1138 aa25.52■■□□□ 1.68
HOXA3-205ENST00000522456 LY9Q9HBG7 655 aa25.52■■□□□ 1.68
HOXA3-205ENST00000522456 GPHNQ9NQX3 736 aaPredicted RBP25.52■■□□□ 1.68
HOXA3-205ENST00000522456 CCPG1Q9ULG6 757 aa25.52■■□□□ 1.68
HOXA3-205ENST00000522456 DIS3Q9Y2L1 958 aaKnown RBP25.52■■□□□ 1.68
HOXA3-205ENST00000522456 DHX16O60231 1041 aaKnown RBP25.51■■□□□ 1.67
HOXA3-205ENST00000522456 ICAM1P05362 532 aa25.51■■□□□ 1.67
HOXA3-205ENST00000522456 PGK2P07205 417 aa25.51■■□□□ 1.67
HOXA3-205ENST00000522456 TKFCQ3LXA3 575 aa25.51■■□□□ 1.67
HOXA3-205ENST00000522456 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.51■■□□□ 1.67
HOXA3-205ENST00000522456 ANKRD35Q8N283 1001 aa25.51■■□□□ 1.67
HOXA3-205ENST00000522456 KCNB2Q92953 911 aa25.51■■□□□ 1.67
HOXA3-205ENST00000522456 TRERF1Q96PN7 1200 aa25.51■■□□□ 1.67
HOXA3-205ENST00000522456 LRRC2Q9BYS8 371 aa25.51■■□□□ 1.67
HOXA3-205ENST00000522456 MTMR10Q9NXD2 777 aa25.51■■□□□ 1.67
HOXA3-205ENST00000522456 ATP11BQ9Y2G3 1177 aa25.51■■□□□ 1.67
HOXA3-205ENST00000522456 CCDC69A6NI79 296 aa25.5■■□□□ 1.67
HOXA3-205ENST00000522456 KLRF2D3W0D1 207 aa25.5■■□□□ 1.67
HOXA3-205ENST00000522456 SH2B2O14492 632 aaPredicted RBP25.5■■□□□ 1.67
HOXA3-205ENST00000522456 EPB41L2O43491 1005 aaKnown RBP25.5■■□□□ 1.67
HOXA3-205ENST00000522456 MYCNP04198 464 aaPredicted RBP25.5■■□□□ 1.67
HOXA3-205ENST00000522456 LTBP2Q14767 1821 aa25.5■■□□□ 1.67
HOXA3-205ENST00000522456 PRAMEF19Q5SWL8 479 aa25.5■■□□□ 1.67
HOXA3-205ENST00000522456 DHX32Q7L7V1 743 aaKnown RBP25.5■■□□□ 1.67
HOXA3-205ENST00000522456 ADGRF4Q8IZF3 695 aa25.5■■□□□ 1.67
HOXA3-205ENST00000522456 STAG2Q8N3U4 1231 aa25.5■■□□□ 1.67
HOXA3-205ENST00000522456 VAT1LQ9HCJ6 419 aa25.5■■□□□ 1.67
HOXA3-205ENST00000522456 RNF146Q9NTX7 359 aa25.5■■□□□ 1.67
HOXA3-205ENST00000522456 STXBP5LQ9Y2K9 1186 aa25.5■■□□□ 1.67
HOXA3-205ENST00000522456 SNX14Q9Y5W7 946 aa25.5■■□□□ 1.67
HOXA3-205ENST00000522456 HMGB1P09429 215 aaKnown RBP25.49■■□□□ 1.67
HOXA3-205ENST00000522456 TROAPQ12815 778 aa25.49■■□□□ 1.67
HOXA3-205ENST00000522456 GRM4Q14833 912 aa25.49■■□□□ 1.67
HOXA3-205ENST00000522456 NUP133Q8WUM0 1156 aa25.49■■□□□ 1.67
HOXA3-205ENST00000522456 USP26Q9BXU7 913 aa25.49■■□□□ 1.67
HOXA3-205ENST00000522456 ACAD9Q9H845 621 aa25.49■■□□□ 1.67
HOXA3-205ENST00000522456 MAD2L2Q9UI95 211 aa25.49■■□□□ 1.67
HOXA3-205ENST00000522456 ZNFX1Q9P2E3 1918 aaKnown RBP25.49■■□□□ 1.67
HOXA3-205ENST00000522456 PALM3A6NDB9 673 aaPredicted RBP25.48■■□□□ 1.67
HOXA3-205ENST00000522456 LIFRP42702 1097 aa25.48■■□□□ 1.67
HOXA3-205ENST00000522456 SLC39A5Q6ZMH5 540 aa25.48■■□□□ 1.67
HOXA3-205ENST00000522456 ZNF654Q8IZM8 581 aa25.48■■□□□ 1.67
HOXA3-205ENST00000522456 JAKMIP1Q96N16 626 aaKnown RBP25.48■■□□□ 1.67
HOXA3-205ENST00000522456 PNMA2Q9UL42 364 aa25.48■■□□□ 1.67
HOXA3-205ENST00000522456 PLXNA1Q9UIW2 1896 aa25.47■■□□□ 1.67
HOXA3-205ENST00000522456 WDR19Q8NEZ3 1342 aa25.47■■□□□ 1.67
HOXA3-205ENST00000522456 DLL1O00548 723 aa25.47■■□□□ 1.67
HOXA3-205ENST00000522456 EXOSC10Q01780 885 aaKnown RBP25.47■■□□□ 1.67
HOXA3-205ENST00000522456 LRRC41Q15345 812 aa25.47■■□□□ 1.67
HOXA3-205ENST00000522456 ZNF792Q3KQV3 632 aa25.47■■□□□ 1.67
HOXA3-205ENST00000522456 MSL3Q8N5Y2 521 aaKnown RBP25.47■■□□□ 1.67
HOXA3-205ENST00000522456 TCEANC2Q96MN5 208 aa25.47■■□□□ 1.67
HOXA3-205ENST00000522456 NRBP1Q9UHY1 535 aa25.47■■□□□ 1.67
HOXA3-205ENST00000522456 TAL1P17542 331 aaPredicted RBP25.46■■□□□ 1.67
HOXA3-205ENST00000522456 SNX17Q15036 470 aa25.46■■□□□ 1.67
HOXA3-205ENST00000522456 CDC37Q16543 378 aaPredicted RBP25.46■■□□□ 1.67
HOXA3-205ENST00000522456 TRIM60Q495X7 471 aa25.46■■□□□ 1.67
HOXA3-205ENST00000522456 MUM1L1Q5H9M0 696 aa25.46■■□□□ 1.67
HOXA3-205ENST00000522456 MYL10Q9BUA6 226 aa25.46■■□□□ 1.67
HOXA3-205ENST00000522456 JMJD4Q9H9V9 463 aa25.46■■□□□ 1.67
HOXA3-205ENST00000522456 SLC12A7Q9Y666 1083 aa25.46■■□□□ 1.67
HOXA3-205ENST00000522456 LAMA2P24043 3122 aaKnown RBP25.46■■□□□ 1.67
HOXA3-205ENST00000522456 DDAH1O94760 285 aa25.45■■□□□ 1.66
HOXA3-205ENST00000522456 ADCYAP1R1P41586 468 aa25.45■■□□□ 1.66
HOXA3-205ENST00000522456 CTCFLQ8NI51 663 aaPredicted RBP25.45■■□□□ 1.66
HOXA3-205ENST00000522456 PRDM5Q9NQX1 630 aaPredicted RBP25.45■■□□□ 1.66
HOXA3-205ENST00000522456 DNAJC25-GNG10A0A024R161 153 aa25.44■■□□□ 1.66
HOXA3-205ENST00000522456 CPA1P15085 419 aa25.44■■□□□ 1.66
HOXA3-205ENST00000522456 PSMA5P28066 241 aa25.44■■□□□ 1.66
HOXA3-205ENST00000522456 FGD1P98174 961 aa25.44■■□□□ 1.66
HOXA3-205ENST00000522456 USH1GQ495M9 461 aa25.44■■□□□ 1.66
HOXA3-205ENST00000522456 BLOC1S2Q6QNY1 142 aa25.44■■□□□ 1.66
HOXA3-205ENST00000522456 SYNE3Q6ZMZ3 975 aa25.44■■□□□ 1.66
HOXA3-205ENST00000522456 MAP3K14Q99558 947 aa25.44■■□□□ 1.66
HOXA3-205ENST00000522456 TINF2Q9BSI4 451 aa25.44■■□□□ 1.66
HOXA3-205ENST00000522456 XPNPEP3Q9NQH7 507 aa25.44■■□□□ 1.66
HOXA3-205ENST00000522456 CALM1P0DP23 149 aa25.43■■□□□ 1.66
HOXA3-205ENST00000522456 CALM2P0DP24 149 aa25.43■■□□□ 1.66
HOXA3-205ENST00000522456 CALM3P0DP25 149 aa25.43■■□□□ 1.66
HOXA3-205ENST00000522456 RARBP10826 455 aa25.43■■□□□ 1.66
HOXA3-205ENST00000522456 KIF5BP33176 963 aa25.43■■□□□ 1.66
HOXA3-205ENST00000522456 NSMFQ6X4W1 530 aa25.43■■□□□ 1.66
HOXA3-205ENST00000522456 ZNF467Q7Z7K2 595 aaPredicted RBP25.43■■□□□ 1.66
HOXA3-205ENST00000522456 FERMT2Q96AC1 680 aa25.43■■□□□ 1.66
HOXA3-205ENST00000522456 A1CFQ9NQ94 594 aaKnown RBP25.43■■□□□ 1.66
HOXA3-205ENST00000522456 POTEB2H3BUK9 544 aa25.42■■□□□ 1.66
HOXA3-205ENST00000522456 EIF5BO60841 1220 aaKnown RBP25.42■■□□□ 1.66
HOXA3-205ENST00000522456 QRICH1Q2TAL8 776 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms