RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 TBC1D9Q6ZT07 1266 aa9.34□□□□□ -0.91
HMBOX1-208ENST00000521516 EP400NLQ6ZTU2 488 aa9.34□□□□□ -0.91
HMBOX1-208ENST00000521516 REPS2Q8NFH8 660 aa9.34□□□□□ -0.91
HMBOX1-208ENST00000521516 FGD4Q96M96 766 aa9.34□□□□□ -0.91
HMBOX1-208ENST00000521516 RAI14Q9P0K7 980 aa9.34□□□□□ -0.91
HMBOX1-208ENST00000521516 SERPINB13Q9UIV8 391 aa9.34□□□□□ -0.91
HMBOX1-208ENST00000521516 ZEB2O60315 1214 aa9.33□□□□□ -0.92
HMBOX1-208ENST00000521516 DLX2Q07687 328 aaPredicted RBP9.33□□□□□ -0.92
HMBOX1-208ENST00000521516 SEPT2Q15019 361 aa9.33□□□□□ -0.92
HMBOX1-208ENST00000521516 GPR179Q6PRD1 2367 aa9.33□□□□□ -0.92
HMBOX1-208ENST00000521516 FRYLO94915 3013 aa9.33□□□□□ -0.92
HMBOX1-208ENST00000521516 H3BNC9 293 aa9.33□□□□□ -0.92
HMBOX1-208ENST00000521516 SHMT1P34896 483 aa9.33□□□□□ -0.92
HMBOX1-208ENST00000521516 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.33□□□□□ -0.92
HMBOX1-208ENST00000521516 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.33□□□□□ -0.92
HMBOX1-208ENST00000521516 SAMD11Q96NU1 681 aa9.33□□□□□ -0.92
HMBOX1-208ENST00000521516 SPTBN2O15020 2390 aa9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 IL15P40933 162 aaPredicted RBP9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 TNFAIP2Q03169 654 aa9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 GPNMBQ14956 572 aa9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 CLUL1Q15846 466 aa9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 ARMCX2Q7L311 632 aa9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 TLK2Q86UE8 772 aa9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 SPATA5Q8NB90 893 aa9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 RETREG2Q8NC44 543 aa9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 SP7Q8TDD2 431 aaPredicted RBP9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 PCGF6Q9BYE7 350 aa9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 IL16Q14005 1332 aa9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 VWA5AO00534 786 aa9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 EYA4O95677 639 aa9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 PDGFBP01127 241 aaPredicted RBP9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 TIMM10P62072 90 aa9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 LRRFIP1Q32MZ4 808 aaKnown RBP9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 EPC2Q52LR7 807 aa9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 PI16Q6UXB8 463 aa9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 RIPOR3Q96MK2 946 aa9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 CD207Q9UJ71 328 aa9.32□□□□□ -0.92
HMBOX1-208ENST00000521516 WDR46O15213 610 aaKnown RBP9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 TBX10O75333 385 aa9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 MVPQ14764 893 aaKnown RBP9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 ADGRA1Q86SQ6 560 aa9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 TMEM105Q8N8V8 129 aa9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 DDX11Q96FC9 970 aa9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 XAGE2Q96GT9 111 aa9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 Q9Y3F1 56 aa9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 MCM3APO60318 1980 aa9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 MYO7AQ13402 2215 aa9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 ABHD14A-ACY1A0A1B0GW23 586 aa9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 ICAM3P32942 547 aa9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 HTRA4P83105 476 aaPredicted RBP9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 HYAL1Q12794 435 aa9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 GPM6BQ13491 265 aa9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 BFSP2Q13515 415 aa9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 NAA16Q6N069 864 aaPredicted RBP9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 CNKSR3Q6P9H4 555 aa9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 MSLNLQ96KJ4 702 aa9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 USP44Q9H0E7 712 aa9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 AP5M1Q9H0R1 490 aa9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 RALYQ9UKM9 306 aaKnown RBP9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 INSL6Q9Y581 213 aa9.31□□□□□ -0.92
HMBOX1-208ENST00000521516 CXCL10P02778 98 aa9.3□□□□□ -0.92
HMBOX1-208ENST00000521516 MCAMP43121 646 aa9.3□□□□□ -0.92
HMBOX1-208ENST00000521516 PTPN21Q16825 1174 aa9.3□□□□□ -0.92
HMBOX1-208ENST00000521516 CCDC27Q2M243 656 aa9.3□□□□□ -0.92
HMBOX1-208ENST00000521516 SIAH1Q8IUQ4 282 aa9.3□□□□□ -0.92
HMBOX1-208ENST00000521516 CRBNQ96SW2 442 aa9.3□□□□□ -0.92
HMBOX1-208ENST00000521516 VCPKMTQ9H867 229 aa9.3□□□□□ -0.92
HMBOX1-208ENST00000521516 LRP2BPQ9P2M1 347 aa9.3□□□□□ -0.92
HMBOX1-208ENST00000521516 PPP1R9AQ9ULJ8 1098 aa9.3□□□□□ -0.92
HMBOX1-208ENST00000521516 TMX2Q9Y320 296 aa9.3□□□□□ -0.92
HMBOX1-208ENST00000521516 FANCIQ9NVI1 1328 aa9.3□□□□□ -0.92
HMBOX1-208ENST00000521516 DYNC1LI2O43237 492 aaPredicted RBP9.29□□□□□ -0.92
HMBOX1-208ENST00000521516 EFCAB14O75071 495 aa9.29□□□□□ -0.92
HMBOX1-208ENST00000521516 ARID4AP29374 1257 aaPredicted RBP9.29□□□□□ -0.92
HMBOX1-208ENST00000521516 TCTN1Q2MV58 587 aa9.29□□□□□ -0.92
HMBOX1-208ENST00000521516 CCDC144CPQ8IYA2 1237 aa9.29□□□□□ -0.92
HMBOX1-208ENST00000521516 SPICE1Q8N0Z3 855 aa9.29□□□□□ -0.92
HMBOX1-208ENST00000521516 FBXO28Q9NVF7 368 aa9.29□□□□□ -0.92
HMBOX1-208ENST00000521516 MYH1P12882 1939 aa9.29□□□□□ -0.92
HMBOX1-208ENST00000521516 OTOGLQ3ZCN5 2332 aa9.29□□□□□ -0.92
HMBOX1-208ENST00000521516 SMPD1P17405 629 aa9.29□□□□□ -0.92
HMBOX1-208ENST00000521516 PTGS1P23219 599 aa9.29□□□□□ -0.92
HMBOX1-208ENST00000521516 GABPAQ06546 454 aa9.29□□□□□ -0.92
HMBOX1-208ENST00000521516 NOL8Q76FK4 1167 aaKnown RBP9.29□□□□□ -0.92
HMBOX1-208ENST00000521516 TTC6Q86TZ1 520 aa9.29□□□□□ -0.92
HMBOX1-208ENST00000521516 KIAA2013Q8IYS2 634 aa9.29□□□□□ -0.92
HMBOX1-208ENST00000521516 TEX13BQ9BXU2 312 aa9.29□□□□□ -0.92
HMBOX1-208ENST00000521516 RIPK3Q9Y572 518 aa9.29□□□□□ -0.92
HMBOX1-208ENST00000521516 IGSF3O75054 1194 aa9.28□□□□□ -0.92
HMBOX1-208ENST00000521516 AFAP1L1Q8TED9 768 aa9.28□□□□□ -0.92
HMBOX1-208ENST00000521516 SEMA4AQ9H3S1 761 aa9.28□□□□□ -0.92
HMBOX1-208ENST00000521516 SCN10AQ9Y5Y9 1956 aa9.28□□□□□ -0.92
HMBOX1-208ENST00000521516 PARNO95453 639 aaKnown RBP9.28□□□□□ -0.92
HMBOX1-208ENST00000521516 PURAQ00577 322 aaKnown RBP9.28□□□□□ -0.92
HMBOX1-208ENST00000521516 PTPN11Q06124 597 aaPredicted RBP9.28□□□□□ -0.92
HMBOX1-208ENST00000521516 MKRN4PQ13434 485 aaPredicted RBP9.28□□□□□ -0.92
HMBOX1-208ENST00000521516 ADAM15Q13444 863 aa9.28□□□□□ -0.92
HMBOX1-208ENST00000521516 NFRKBQ6P4R8 1299 aa9.28□□□□□ -0.92
HMBOX1-208ENST00000521516 WWC1Q8IX03 1113 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms