RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 FBXO11Q86XK2 927 aa14.36□□□□□ -0.11
CLK4-208ENST00000520957 LZTS2Q9BRK4 669 aa14.36□□□□□ -0.11
CLK4-208ENST00000520957 SPZ1Q9BXG8 430 aa14.36□□□□□ -0.11
CLK4-208ENST00000520957 A1CFQ9NQ94 594 aaKnown RBP14.36□□□□□ -0.11
CLK4-208ENST00000520957 DDX49Q9Y6V7 483 aaKnown RBP14.36□□□□□ -0.11
CLK4-208ENST00000520957 V9GY48 417 aaPredicted RBP14.36□□□□□ -0.11
CLK4-208ENST00000520957 BAZ2BQ9UIF8 2168 aaKnown RBP14.36□□□□□ -0.11
CLK4-208ENST00000520957 A0A0G2JMZ2 1700 aa14.36□□□□□ -0.11
CLK4-208ENST00000520957 PNMA6FA0A0J9YX94 578 aa14.36□□□□□ -0.11
CLK4-208ENST00000520957 ADCY3O60266 1144 aa14.36□□□□□ -0.11
CLK4-208ENST00000520957 CNTN2Q02246 1040 aa14.36□□□□□ -0.11
CLK4-208ENST00000520957 KCTD2Q14681 263 aa14.36□□□□□ -0.11
CLK4-208ENST00000520957 NTRK3Q16288 839 aa14.36□□□□□ -0.11
CLK4-208ENST00000520957 ME3Q16798 604 aa14.36□□□□□ -0.11
CLK4-208ENST00000520957 DPP9Q86TI2 863 aa14.36□□□□□ -0.11
CLK4-208ENST00000520957 ANKRD35Q8N283 1001 aa14.36□□□□□ -0.11
CLK4-208ENST00000520957 NECAB1Q8N987 351 aa14.36□□□□□ -0.11
CLK4-208ENST00000520957 CHST13Q8NET6 341 aa14.36□□□□□ -0.11
CLK4-208ENST00000520957 PHKBQ93100 1093 aa14.36□□□□□ -0.11
CLK4-208ENST00000520957 ZNF274Q96GC6 653 aaPredicted RBP14.36□□□□□ -0.11
CLK4-208ENST00000520957 ACAD9Q9H845 621 aa14.36□□□□□ -0.11
CLK4-208ENST00000520957 PCDHA1Q9Y5I3 950 aa14.36□□□□□ -0.11
CLK4-208ENST00000520957 DOCK3Q8IZD9 2030 aa14.35□□□□□ -0.11
CLK4-208ENST00000520957 OPLAHO14841 1288 aa14.35□□□□□ -0.11
CLK4-208ENST00000520957 SMARCA1P28370 1054 aa14.35□□□□□ -0.11
CLK4-208ENST00000520957 RCAN1P53805 252 aa14.35□□□□□ -0.11
CLK4-208ENST00000520957 SCRN1Q12765 414 aa14.35□□□□□ -0.11
CLK4-208ENST00000520957 IRF5Q13568 498 aa14.35□□□□□ -0.11
CLK4-208ENST00000520957 PKN2Q16513 984 aaKnown RBP14.35□□□□□ -0.11
CLK4-208ENST00000520957 NSMFQ6X4W1 530 aa14.35□□□□□ -0.11
CLK4-208ENST00000520957 TRIB2Q92519 343 aa14.35□□□□□ -0.11
CLK4-208ENST00000520957 RRP36Q96EU6 259 aaKnown RBP14.35□□□□□ -0.11
CLK4-208ENST00000520957 DDX11Q96FC9 970 aa14.35□□□□□ -0.11
CLK4-208ENST00000520957 AMNQ9BXJ7 453 aa14.35□□□□□ -0.11
CLK4-208ENST00000520957 RBM28Q9NW13 759 aaKnown RBP14.35□□□□□ -0.11
CLK4-208ENST00000520957 DNAJC25-GNG10A0A024R161 153 aa14.34□□□□□ -0.11
CLK4-208ENST00000520957 CD2BP2O95400 341 aaKnown RBP14.34□□□□□ -0.11
CLK4-208ENST00000520957 GRK4P32298 578 aa14.34□□□□□ -0.11
CLK4-208ENST00000520957 RGS2P41220 211 aa14.34□□□□□ -0.11
CLK4-208ENST00000520957 PRMT2P55345 433 aa14.34□□□□□ -0.11
CLK4-208ENST00000520957 BAATQ14032 418 aaPredicted RBP14.34□□□□□ -0.11
CLK4-208ENST00000520957 ZNF792Q3KQV3 632 aa14.34□□□□□ -0.11
CLK4-208ENST00000520957 TKFCQ3LXA3 575 aa14.34□□□□□ -0.11
CLK4-208ENST00000520957 TNS4Q8IZW8 715 aa14.34□□□□□ -0.11
CLK4-208ENST00000520957 ABRAQ8N0Z2 381 aa14.34□□□□□ -0.11
CLK4-208ENST00000520957 SOCS4Q8WXH5 440 aa14.34□□□□□ -0.11
CLK4-208ENST00000520957 CYP39A1Q9NYL5 469 aa14.34□□□□□ -0.11
CLK4-208ENST00000520957 FBXO40Q9UH90 709 aa14.34□□□□□ -0.11
CLK4-208ENST00000520957 SMCHD1A6NHR9 2005 aa14.34□□□□□ -0.11
CLK4-208ENST00000520957 COL11A1P12107 1806 aaPredicted RBP14.34□□□□□ -0.11
CLK4-208ENST00000520957 CNTNAP5Q8WYK1 1306 aa14.33□□□□□ -0.11
CLK4-208ENST00000520957 HOXC6P09630 235 aa14.33□□□□□ -0.11
CLK4-208ENST00000520957 COPB2P35606 906 aa14.33□□□□□ -0.11
CLK4-208ENST00000520957 SLC30A10Q6XR72 485 aa14.33□□□□□ -0.11
CLK4-208ENST00000520957 GPKOWQ92917 476 aaPredicted RBP eCLIP14.33□□□□□ -0.11
CLK4-208ENST00000520957 FGD4Q96M96 766 aa14.33□□□□□ -0.11
CLK4-208ENST00000520957 ASTN1O14525 1302 aa14.33□□□□□ -0.12
CLK4-208ENST00000520957 CCDC196A0A1B0GTZ2 297 aa14.33□□□□□ -0.12
CLK4-208ENST00000520957 PTPDC1A2A3K4 754 aa14.33□□□□□ -0.12
CLK4-208ENST00000520957 SOWAHBA6NEL2 793 aa14.33□□□□□ -0.12
CLK4-208ENST00000520957 PFKFB2O60825 505 aa14.33□□□□□ -0.12
CLK4-208ENST00000520957 XRCC5P13010 732 aaKnown RBP14.33□□□□□ -0.12
CLK4-208ENST00000520957 CYP2C19P33261 490 aa14.33□□□□□ -0.12
CLK4-208ENST00000520957 RPS6P62753 249 aaKnown RBP14.33□□□□□ -0.12
CLK4-208ENST00000520957 RABEP1Q15276 862 aa14.33□□□□□ -0.12
CLK4-208ENST00000520957 ANKRD1Q15327 319 aa14.33□□□□□ -0.12
CLK4-208ENST00000520957 SLC9C1Q4G0N8 1177 aa14.33□□□□□ -0.12
CLK4-208ENST00000520957 TYW1BQ6NUM6 668 aa14.33□□□□□ -0.12
CLK4-208ENST00000520957 SLKQ9H2G2 1235 aaPredicted RBP14.33□□□□□ -0.12
CLK4-208ENST00000520957 BIN2Q9UBW5 565 aaPredicted RBP14.33□□□□□ -0.12
CLK4-208ENST00000520957 POTEB2H3BUK9 544 aa14.32□□□□□ -0.12
CLK4-208ENST00000520957 CTDNEP1O95476 244 aa14.32□□□□□ -0.12
CLK4-208ENST00000520957 IGHA2P01877 340 aa14.32□□□□□ -0.12
CLK4-208ENST00000520957 CALML3P27482 149 aa14.32□□□□□ -0.12
CLK4-208ENST00000520957 ST3GAL1Q11201 340 aa14.32□□□□□ -0.12
CLK4-208ENST00000520957 PPP2R5BQ15173 497 aa14.32□□□□□ -0.12
CLK4-208ENST00000520957 MTFR1Q15390 333 aa14.32□□□□□ -0.12
CLK4-208ENST00000520957 PKN1Q16512 942 aa14.32□□□□□ -0.12
CLK4-208ENST00000520957 PRAMEF19Q5SWL8 479 aa14.32□□□□□ -0.12
CLK4-208ENST00000520957 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.32□□□□□ -0.12
CLK4-208ENST00000520957 FAM133AQ8N9E0 248 aa14.32□□□□□ -0.12
CLK4-208ENST00000520957 PXYLP1Q8TE99 480 aa14.32□□□□□ -0.12
CLK4-208ENST00000520957 MAML3Q96JK9 1138 aa14.32□□□□□ -0.12
CLK4-208ENST00000520957 APBA2Q99767 749 aa14.32□□□□□ -0.12
CLK4-208ENST00000520957 SLC26A6Q9BXS9 759 aa14.32□□□□□ -0.12
CLK4-208ENST00000520957 COL20A1Q9P218 1284 aa14.32□□□□□ -0.12
CLK4-208ENST00000520957 SEC63Q9UGP8 760 aaKnown RBP14.32□□□□□ -0.12
CLK4-208ENST00000520957 NID2Q14112 1375 aa14.31□□□□□ -0.12
CLK4-208ENST00000520957 ABCB11O95342 1321 aa14.31□□□□□ -0.12
CLK4-208ENST00000520957 CFBP00751 764 aa14.31□□□□□ -0.12
CLK4-208ENST00000520957 INHAP05111 366 aa14.31□□□□□ -0.12
CLK4-208ENST00000520957 IFNAR1P17181 557 aa14.31□□□□□ -0.12
CLK4-208ENST00000520957 HOXA13P31271 388 aaPredicted RBP14.31□□□□□ -0.12
CLK4-208ENST00000520957 WWC2Q6AWC2 1192 aa14.31□□□□□ -0.12
CLK4-208ENST00000520957 RNF207Q6ZRF8 634 aa14.31□□□□□ -0.12
CLK4-208ENST00000520957 HEATR3Q7Z4Q2 680 aa14.31□□□□□ -0.12
CLK4-208ENST00000520957 SHISA4Q96DD7 197 aa14.31□□□□□ -0.12
CLK4-208ENST00000520957 ABHD8Q96I13 439 aa14.31□□□□□ -0.12
CLK4-208ENST00000520957 LIMCH1Q9UPQ0 1083 aa14.31□□□□□ -0.12
CLK4-208ENST00000520957 MRPL11Q9Y3B7 192 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms