RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 SMARCA5O60264 1052 aaPredicted RBP13.66□□□□□ -0.22
MRPS28-206ENST00000520946 SUPT20HL2P0C7V6 817 aa13.66□□□□□ -0.22
MRPS28-206ENST00000520946 RASIP1Q5U651 963 aa13.66□□□□□ -0.22
MRPS28-206ENST00000520946 IQSEC1Q6DN90 963 aa13.66□□□□□ -0.22
MRPS28-206ENST00000520946 KIAA1211Q6ZU35 1233 aa13.66□□□□□ -0.22
MRPS28-206ENST00000520946 KBTBD3Q8NAB2 608 aa13.66□□□□□ -0.22
MRPS28-206ENST00000520946 STAG1Q8WVM7 1258 aa13.66□□□□□ -0.22
MRPS28-206ENST00000520946 AGBL1Q96MI9 1066 aa13.66□□□□□ -0.22
MRPS28-206ENST00000520946 CXXC1Q9P0U4 656 aaPredicted RBP13.66□□□□□ -0.22
MRPS28-206ENST00000520946 MTMR7Q9Y216 660 aa13.66□□□□□ -0.22
MRPS28-206ENST00000520946 PATL2C9JE40 543 aaKnown RBP13.65□□□□□ -0.22
MRPS28-206ENST00000520946 CD4P01730 458 aa13.65□□□□□ -0.22
MRPS28-206ENST00000520946 ACTN1P12814 892 aa13.65□□□□□ -0.22
MRPS28-206ENST00000520946 ATP2A2P16615 1042 aaKnown RBP13.65□□□□□ -0.22
MRPS28-206ENST00000520946 MCCP23508 829 aa13.65□□□□□ -0.22
MRPS28-206ENST00000520946 RABGGTBP53611 331 aa13.65□□□□□ -0.22
MRPS28-206ENST00000520946 TFAP4Q01664 338 aa13.65□□□□□ -0.22
MRPS28-206ENST00000520946 BRDTQ58F21 947 aaPredicted RBP13.65□□□□□ -0.22
MRPS28-206ENST00000520946 NSMFQ6X4W1 530 aa13.65□□□□□ -0.22
MRPS28-206ENST00000520946 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.65□□□□□ -0.22
MRPS28-206ENST00000520946 OSBP2Q969R2 916 aa13.65□□□□□ -0.22
MRPS28-206ENST00000520946 NAPBQ9H115 298 aa13.65□□□□□ -0.22
MRPS28-206ENST00000520946 TRPV6Q9H1D0 765 aa13.65□□□□□ -0.22
MRPS28-206ENST00000520946 A1CFQ9NQ94 594 aaKnown RBP13.65□□□□□ -0.22
MRPS28-206ENST00000520946 STX8Q9UNK0 236 aa13.65□□□□□ -0.22
MRPS28-206ENST00000520946 TSPY2A6NKD2 308 aa13.64□□□□□ -0.23
MRPS28-206ENST00000520946 SMPD1P17405 629 aa13.64□□□□□ -0.23
MRPS28-206ENST00000520946 PSMC6P62333 389 aa13.64□□□□□ -0.23
MRPS28-206ENST00000520946 ADGRE1Q14246 886 aa13.64□□□□□ -0.23
MRPS28-206ENST00000520946 FAM47CQ5HY64 1035 aa13.64□□□□□ -0.23
MRPS28-206ENST00000520946 TMEM67Q5HYA8 995 aa13.64□□□□□ -0.23
MRPS28-206ENST00000520946 DEFB128Q7Z7B8 93 aa13.64□□□□□ -0.23
MRPS28-206ENST00000520946 IFNL3Q8IZI9 196 aa13.64□□□□□ -0.23
MRPS28-206ENST00000520946 FAM133AQ8N9E0 248 aa13.64□□□□□ -0.23
MRPS28-206ENST00000520946 NEDD1Q8NHV4 660 aa13.64□□□□□ -0.23
MRPS28-206ENST00000520946 FAM122AQ96E09 287 aa13.64□□□□□ -0.23
MRPS28-206ENST00000520946 FGD4Q96M96 766 aa13.64□□□□□ -0.23
MRPS28-206ENST00000520946 MPHOSPH6Q99547 160 aaKnown RBP13.64□□□□□ -0.23
MRPS28-206ENST00000520946 CCPG1Q9ULG6 757 aa13.64□□□□□ -0.23
MRPS28-206ENST00000520946 GNEQ9Y223 722 aaKnown RBP13.64□□□□□ -0.23
MRPS28-206ENST00000520946 YBX2Q9Y2T7 364 aaKnown RBP13.64□□□□□ -0.23
MRPS28-206ENST00000520946 Q9Y3F1 56 aa13.64□□□□□ -0.23
MRPS28-206ENST00000520946 PCDHA11Q9Y5I1 949 aa13.64□□□□□ -0.23
MRPS28-206ENST00000520946 IGKV6D-41A0A0C4DH26 115 aa13.63□□□□□ -0.23
MRPS28-206ENST00000520946 SOWAHBA6NEL2 793 aa13.63□□□□□ -0.23
MRPS28-206ENST00000520946 KIF28PB7ZC32 967 aa13.63□□□□□ -0.23
MRPS28-206ENST00000520946 B4GALT4O60513 344 aa13.63□□□□□ -0.23
MRPS28-206ENST00000520946 PFKMP08237 780 aa13.63□□□□□ -0.23
MRPS28-206ENST00000520946 MYL3P08590 195 aa13.63□□□□□ -0.23
MRPS28-206ENST00000520946 CCDC96Q2M329 555 aa13.63□□□□□ -0.23
MRPS28-206ENST00000520946 KCTD1Q719H9 257 aa13.63□□□□□ -0.23
MRPS28-206ENST00000520946 FBXO16Q8IX29 292 aaPredicted RBP13.63□□□□□ -0.23
MRPS28-206ENST00000520946 SLC43A3Q8NBI5 491 aa13.63□□□□□ -0.23
MRPS28-206ENST00000520946 RETREG2Q8NC44 543 aa13.63□□□□□ -0.23
MRPS28-206ENST00000520946 SCLYQ96I15 445 aa13.63□□□□□ -0.23
MRPS28-206ENST00000520946 GMCL1Q96IK5 515 aa13.63□□□□□ -0.23
MRPS28-206ENST00000520946 NOC4LQ9BVI4 516 aaKnown RBP13.63□□□□□ -0.23
MRPS28-206ENST00000520946 C1QTNF1Q9BXJ1 281 aa13.63□□□□□ -0.23
MRPS28-206ENST00000520946 FTOQ9C0B1 505 aaKnown RBP eCLIP13.63□□□□□ -0.23
MRPS28-206ENST00000520946 VTA1Q9NP79 307 aa13.63□□□□□ -0.23
MRPS28-206ENST00000520946 PDGFCQ9NRA1 345 aa13.63□□□□□ -0.23
MRPS28-206ENST00000520946 POLR3EQ9NVU0 708 aa13.63□□□□□ -0.23
MRPS28-206ENST00000520946 ADD3Q9UEY8 706 aaKnown RBP13.63□□□□□ -0.23
MRPS28-206ENST00000520946 UMODL1Q5DID0 1318 aa13.63□□□□□ -0.23
MRPS28-206ENST00000520946 RAD50Q92878 1312 aa13.63□□□□□ -0.23
MRPS28-206ENST00000520946 MYH7P12883 1935 aa13.62□□□□□ -0.23
MRPS28-206ENST00000520946 MCM3APO60318 1980 aa13.62□□□□□ -0.23
MRPS28-206ENST00000520946 CTAGE5O15320 804 aa13.62□□□□□ -0.23
MRPS28-206ENST00000520946 CPT1AP50416 773 aa13.62□□□□□ -0.23
MRPS28-206ENST00000520946 SNAP25P60880 206 aa13.62□□□□□ -0.23
MRPS28-206ENST00000520946 NKX3-2P78367 333 aa13.62□□□□□ -0.23
MRPS28-206ENST00000520946 PPARAQ07869 468 aa13.62□□□□□ -0.23
MRPS28-206ENST00000520946 RCSD1Q6JBY9 416 aa13.62□□□□□ -0.23
MRPS28-206ENST00000520946 KATNBL1Q9H079 304 aa13.62□□□□□ -0.23
MRPS28-206ENST00000520946 TOMM22Q9NS69 142 aa13.62□□□□□ -0.23
MRPS28-206ENST00000520946 NOD1Q9Y239 953 aa13.62□□□□□ -0.23
MRPS28-206ENST00000520946 MYH4Q9Y623 1939 aa13.62□□□□□ -0.23
MRPS28-206ENST00000520946 TTC28Q96AY4 2481 aa13.62□□□□□ -0.23
MRPS28-206ENST00000520946 PTPDC1A2A3K4 754 aa13.61□□□□□ -0.23
MRPS28-206ENST00000520946 M0R2C6 588 aa13.61□□□□□ -0.23
MRPS28-206ENST00000520946 ERC2O15083 957 aa13.61□□□□□ -0.23
MRPS28-206ENST00000520946 MYOGP15173 224 aa13.61□□□□□ -0.23
MRPS28-206ENST00000520946 CHMP4BP1P59074 171 aa13.61□□□□□ -0.23
MRPS28-206ENST00000520946 FSD1Q9BTV5 496 aa13.61□□□□□ -0.23
MRPS28-206ENST00000520946 WDR11Q9BZH6 1224 aa13.61□□□□□ -0.23
MRPS28-206ENST00000520946 ALDH8A1Q9H2A2 487 aaPredicted RBP13.61□□□□□ -0.23
MRPS28-206ENST00000520946 CERS4Q9HA82 394 aa13.61□□□□□ -0.23
MRPS28-206ENST00000520946 EPB41L4AQ9HCS5 686 aaPredicted RBP13.61□□□□□ -0.23
MRPS28-206ENST00000520946 CYP39A1Q9NYL5 469 aa13.61□□□□□ -0.23
MRPS28-206ENST00000520946 ZBTB47Q9UFB7 747 aaPredicted RBP13.61□□□□□ -0.23
MRPS28-206ENST00000520946 RAPGEFL1Q9UHV5 662 aa13.61□□□□□ -0.23
MRPS28-206ENST00000520946 ASTN1O14525 1302 aa13.61□□□□□ -0.23
MRPS28-206ENST00000520946 TNKSO95271 1327 aa13.61□□□□□ -0.23
MRPS28-206ENST00000520946 LAMA2P24043 3122 aaKnown RBP13.6□□□□□ -0.23
MRPS28-206ENST00000520946 B4DLN1 442 aa13.6□□□□□ -0.23
MRPS28-206ENST00000520946 RANBP6O60518 1105 aaKnown RBP13.6□□□□□ -0.23
MRPS28-206ENST00000520946 CYP2C9P11712 490 aa13.6□□□□□ -0.23
MRPS28-206ENST00000520946 MRPL12P52815 198 aaKnown RBP13.6□□□□□ -0.23
MRPS28-206ENST00000520946 MUM1L1Q5H9M0 696 aa13.6□□□□□ -0.23
MRPS28-206ENST00000520946 TSHZ3Q63HK5 1081 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms