RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 TMEM57Q8N5G2 664 aa9.73□□□□□ -0.85
SHPRH-208ENST00000520752 C3orf20Q8ND61 904 aa9.73□□□□□ -0.85
SHPRH-208ENST00000520752 TRIM58Q8NG06 486 aa9.73□□□□□ -0.85
SHPRH-208ENST00000520752 FAM81AQ8TBF8 368 aa9.73□□□□□ -0.85
SHPRH-208ENST00000520752 EPS8L3Q8TE67 593 aaKnown RBP9.73□□□□□ -0.85
SHPRH-208ENST00000520752 WHAMMQ8TF30 809 aa9.73□□□□□ -0.85
SHPRH-208ENST00000520752 TTC9Q92623 222 aa9.73□□□□□ -0.85
SHPRH-208ENST00000520752 P3H4Q92791 437 aa9.73□□□□□ -0.85
SHPRH-208ENST00000520752 BTBD6Q96KE9 485 aa9.73□□□□□ -0.85
SHPRH-208ENST00000520752 SLX1AQ9BQ83 275 aa9.73□□□□□ -0.85
SHPRH-208ENST00000520752 MOV10L1Q9BXT6 1211 aaKnown RBP9.73□□□□□ -0.85
SHPRH-208ENST00000520752 SCAND2PQ9GZW5 306 aaPredicted RBP9.73□□□□□ -0.85
SHPRH-208ENST00000520752 BICC1Q9H694 974 aaKnown RBP9.73□□□□□ -0.85
SHPRH-208ENST00000520752 VCPKMTQ9H867 229 aa9.73□□□□□ -0.85
SHPRH-208ENST00000520752 FAM204AQ9H8W3 233 aa9.73□□□□□ -0.85
SHPRH-208ENST00000520752 DZANK1Q9NVP4 752 aa9.73□□□□□ -0.85
SHPRH-208ENST00000520752 NAGPAQ9UK23 515 aa9.73□□□□□ -0.85
SHPRH-208ENST00000520752 STARD13Q9Y3M8 1113 aa9.73□□□□□ -0.85
SHPRH-208ENST00000520752 MAGI3Q5TCQ9 1506 aa9.72□□□□□ -0.85
SHPRH-208ENST00000520752 ADGRB2O60241 1585 aa9.72□□□□□ -0.85
SHPRH-208ENST00000520752 MYO1BO43795 1136 aa9.72□□□□□ -0.85
SHPRH-208ENST00000520752 CPB1P15086 417 aa9.72□□□□□ -0.85
SHPRH-208ENST00000520752 ATP5JP18859 108 aa9.72□□□□□ -0.85
SHPRH-208ENST00000520752 ACTN3Q08043 901 aaPredicted RBP9.72□□□□□ -0.85
SHPRH-208ENST00000520752 LAMB3Q13751 1172 aa9.72□□□□□ -0.85
SHPRH-208ENST00000520752 GNL2Q13823 731 aaKnown RBP9.72□□□□□ -0.85
SHPRH-208ENST00000520752 CCDC178Q5BJE1 867 aa9.72□□□□□ -0.85
SHPRH-208ENST00000520752 PERM1Q5SV97 790 aa9.72□□□□□ -0.85
SHPRH-208ENST00000520752 ACBD5Q5T8D3 534 aaPredicted RBP9.72□□□□□ -0.85
SHPRH-208ENST00000520752 CAPRIN2Q6IMN6 1127 aaKnown RBP9.72□□□□□ -0.85
SHPRH-208ENST00000520752 KANK3Q6NY19 840 aa9.72□□□□□ -0.85
SHPRH-208ENST00000520752 SRGAP1Q7Z6B7 1085 aa9.72□□□□□ -0.85
SHPRH-208ENST00000520752 EXOC8Q8IYI6 725 aa9.72□□□□□ -0.85
SHPRH-208ENST00000520752 LRRN4CLQ8ND94 238 aa9.72□□□□□ -0.85
SHPRH-208ENST00000520752 LEO1Q8WVC0 666 aaPredicted RBP9.72□□□□□ -0.85
SHPRH-208ENST00000520752 LMBR1Q8WVP7 490 aa9.72□□□□□ -0.85
SHPRH-208ENST00000520752 LZICQ8WZA0 190 aa9.72□□□□□ -0.85
SHPRH-208ENST00000520752 SMARCC1Q92922 1105 aaPredicted RBP9.72□□□□□ -0.85
SHPRH-208ENST00000520752 BICD1Q96G01 975 aa9.72□□□□□ -0.85
SHPRH-208ENST00000520752 FRMD6Q96NE9 622 aa9.72□□□□□ -0.85
SHPRH-208ENST00000520752 TRIM7Q9C029 511 aa9.72□□□□□ -0.85
SHPRH-208ENST00000520752 NPHS2Q9NP85 383 aa9.72□□□□□ -0.85
SHPRH-208ENST00000520752 MYO5CQ9NQX4 1742 aa9.72□□□□□ -0.85
SHPRH-208ENST00000520752 NESP48681 1621 aa9.71□□□□□ -0.85
SHPRH-208ENST00000520752 SHPRHQ149N8 1683 aa9.71□□□□□ -0.85
SHPRH-208ENST00000520752 A0A1W2PP55 124 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 EME2A4GXA9 379 aaPredicted RBP9.71□□□□□ -0.86
SHPRH-208ENST00000520752 NFKBIEO00221 500 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 EIF3HO15372 352 aaKnown RBP eCLIP9.71□□□□□ -0.867e-7■■■□□ 16.9
SHPRH-208ENST00000520752 PRPF6O94906 941 aaKnown RBP9.71□□□□□ -0.86
SHPRH-208ENST00000520752 LUC7L3O95232 432 aaKnown RBP9.71□□□□□ -0.86
SHPRH-208ENST00000520752 EIF2AK2P19525 551 aaKnown RBP9.71□□□□□ -0.86
SHPRH-208ENST00000520752 SYT1P21579 422 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 YY1P25490 414 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 CCT5P48643 541 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 IRAK1P51617 712 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 DYNC1I2Q13409 638 aaKnown RBP9.71□□□□□ -0.86
SHPRH-208ENST00000520752 CASP8Q14790 479 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.71□□□□□ -0.86
SHPRH-208ENST00000520752 CCDC40Q4G0X9 1142 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 ZNF385CQ66K41 422 aaPredicted RBP9.71□□□□□ -0.86
SHPRH-208ENST00000520752 WDR93Q6P2C0 686 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 CRELD2Q6UXH1 353 aaPredicted RBP9.71□□□□□ -0.86
SHPRH-208ENST00000520752 C20orf204Q6ZNR8 217 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 ARHGAP22Q7Z5H3 698 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 FAM76AQ8TAV0 307 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 C17orf50Q8WW18 174 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 SPDL1Q96EA4 605 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 CHAMP1Q96JM3 812 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 DUSP9Q99956 384 aaKnown RBP9.71□□□□□ -0.86
SHPRH-208ENST00000520752 BPIFA3Q9BQP9 254 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 PBX4Q9BYU1 374 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 DCTPP1Q9H773 170 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 LATS2Q9NRM7 1088 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 ANO10Q9NW15 660 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 NLRP2Q9NX02 1062 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 FANCD2Q9BXW9 1451 aa9.71□□□□□ -0.86
SHPRH-208ENST00000520752 BECN2A8MW95 431 aa9.7□□□□□ -0.86
SHPRH-208ENST00000520752 SHISA8B8ZZ34 492 aa9.7□□□□□ -0.86
SHPRH-208ENST00000520752 GIPC1O14908 333 aa9.7□□□□□ -0.86
SHPRH-208ENST00000520752 FIBPO43427 364 aa9.7□□□□□ -0.86
SHPRH-208ENST00000520752 IRS1P35568 1242 aa9.7□□□□□ -0.86
SHPRH-208ENST00000520752 NAP1L1P55209 391 aaKnown RBP9.7□□□□□ -0.86
SHPRH-208ENST00000520752 LRRC23Q53EV4 343 aaPredicted RBP9.7□□□□□ -0.86
SHPRH-208ENST00000520752 ELMSAN1Q6PJG2 1045 aa9.7□□□□□ -0.86
SHPRH-208ENST00000520752 MTHFD1LQ6UB35 978 aa9.7□□□□□ -0.86
SHPRH-208ENST00000520752 TCP11L2Q8N4U5 519 aa9.7□□□□□ -0.86
SHPRH-208ENST00000520752 GBP7Q8N8V2 638 aaPredicted RBP9.7□□□□□ -0.86
SHPRH-208ENST00000520752 B4GALNT2Q8NHY0 566 aa9.7□□□□□ -0.86
SHPRH-208ENST00000520752 PARD3BQ8TEW8 1205 aa9.7□□□□□ -0.86
SHPRH-208ENST00000520752 HDAC7Q8WUI4 952 aa9.7□□□□□ -0.86
SHPRH-208ENST00000520752 PLD4Q96BZ4 506 aa9.7□□□□□ -0.86
SHPRH-208ENST00000520752 ZSCAN31Q96LW9 406 aaPredicted RBP9.7□□□□□ -0.86
SHPRH-208ENST00000520752 OSMRQ99650 979 aa9.7□□□□□ -0.86
SHPRH-208ENST00000520752 LPIN3Q9BQK8 851 aa9.7□□□□□ -0.86
SHPRH-208ENST00000520752 ZKSCAN3Q9BRR0 538 aa9.7□□□□□ -0.86
SHPRH-208ENST00000520752 SUV39H2Q9H5I1 410 aa9.7□□□□□ -0.86
SHPRH-208ENST00000520752 CD248Q9HCU0 757 aa9.7□□□□□ -0.86
SHPRH-208ENST00000520752 LMCD1Q9NZU5 365 aa9.7□□□□□ -0.86
SHPRH-208ENST00000520752 CDHR2Q9BYE9 1310 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms