RNA–Protein interactions for RNA: ENST00000518387.1

CTD-2270F17.1-201, humanhuman

TSL 1 (best) BASIC

Gene CTD-2270F17.1, Length 1,215 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTD-2270F17.1-201ENST00000518387 CCND3P30281 292 aaPredicted RBP12.66□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 CACNB2Q08289 660 aaPredicted RBP12.66□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 PDAP1Q13442 181 aaKnown RBP12.66□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 ASPRV1Q53RT3 343 aa12.66□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 GPATCH4Q5T3I0 446 aaKnown RBP12.66□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 MFSD14CQ5VZR4 134 aa12.66□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 BTNL9Q6UXG8 535 aa12.66□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 ABRAQ8N0Z2 381 aa12.66□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 ANKRD35Q8N283 1001 aa12.66□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 ANKS1AQ92625 1134 aa12.66□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 SHISA4Q96DD7 197 aa12.66□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 MAML3Q96JK9 1138 aa12.66□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 RANBP17Q9H2T7 1088 aaKnown RBP12.66□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 ACAD9Q9H845 621 aa12.66□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 GPHNQ9NQX3 736 aaPredicted RBP12.66□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 RPTORQ8N122 1335 aa12.65□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 GJB1P08034 283 aa12.65□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 HOXC6P09630 235 aa12.65□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 MCM5P33992 734 aa12.65□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 RGS19P49795 217 aa12.65□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 USH1GQ495M9 461 aa12.65□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 MUM1L1Q5H9M0 696 aa12.65□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 NFXL1Q6ZNB6 911 aa12.65□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 STAG2Q8N3U4 1231 aa12.65□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 PDCD7Q8N8D1 485 aaKnown RBP12.65□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 CHST13Q8NET6 341 aa12.65□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 U2AF1L4Q8WU68 220 aaKnown RBP12.65□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 NUP133Q8WUM0 1156 aa12.65□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 TCEANC2Q96MN5 208 aa12.65□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 TRERF1Q96PN7 1200 aa12.65□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 MYL10Q9BUA6 226 aa12.65□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 VAT1LQ9HCJ6 419 aa12.65□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 PAK6Q9NQU5 681 aaPredicted RBP12.65□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 LRRC37A2A6NM11 1700 aa12.65□□□□□ -0.38
CTD-2270F17.1-201ENST00000518387 MKI67P46013 3256 aaKnown RBP12.64□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 REC8O95072 547 aa12.64□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 TFRCP02786 760 aaKnown RBP12.64□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 ICAM1P05362 532 aa12.64□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 GJA8P48165 433 aa12.64□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 CDC37Q16543 378 aaPredicted RBP12.64□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 MAP3K21Q5TCX8 1036 aa12.64□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 NSMFQ6X4W1 530 aa12.64□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 CATIPQ7Z7H3 387 aa12.64□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 RAB11FIP4Q86YS3 637 aa12.64□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 LY9Q9HBG7 655 aa12.64□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 A1CFQ9NQ94 594 aaKnown RBP12.64□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 FBXO40Q9UH90 709 aa12.64□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 CCDC69A6NI79 296 aa12.63□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 KLRF2D3W0D1 207 aa12.63□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 SH2B2O14492 632 aaPredicted RBP12.63□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 SGPL1O95470 568 aa12.63□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 RXRAP19793 462 aa12.63□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 ZNF792Q3KQV3 632 aa12.63□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 ADCK5Q3MIX3 580 aa12.63□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 PRAMEF19Q5SWL8 479 aa12.63□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 ANO1Q5XXA6 986 aa12.63□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 OLFML2BQ68BL8 750 aa12.63□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 CCDC144CPQ8IYA2 1237 aa12.63□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 ADGRF4Q8IZF3 695 aa12.63□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 ZNF654Q8IZM8 581 aa12.63□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 TRPV1Q8NER1 839 aa12.63□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 IGDCC4Q8TDY8 1250 aa12.63□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 NEK1Q96PY6 1258 aa12.63□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 MAD2L2Q9UI95 211 aa12.63□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 ALPK3Q96L96 1907 aa12.62□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 NFIBO00712 420 aa12.62□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 FARP2O94887 1054 aaPredicted RBP12.62□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 CYBAP13498 195 aa12.62□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 CPA1P15085 419 aa12.62□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 CNTN2Q02246 1040 aa12.62□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 GRM4Q14833 912 aa12.62□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 QRICH1Q2TAL8 776 aa12.62□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 TKFCQ3LXA3 575 aa12.62□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 HOMER1Q86YM7 354 aa12.62□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 PIBF1Q8WXW3 757 aa12.62□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 RNF25Q96BH1 459 aaPredicted RBP12.62□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 TMEM87BQ96K49 555 aa12.62□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 DNAJC25-GNG10A0A024R161 153 aa12.61□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 PTPDC1A2A3K4 754 aa12.61□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 HSPA4P34932 840 aa12.61□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 TROAPQ12815 778 aa12.61□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 KRT32Q14532 448 aa12.61□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 SLC30A10Q6XR72 485 aa12.61□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 CTCFLQ8NI51 663 aaPredicted RBP12.61□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 DIS3LQ8TF46 1054 aaKnown RBP12.61□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 MARVELD3Q96A59 401 aa12.61□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 JAKMIP1Q96N16 626 aaKnown RBP12.61□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 PURBQ96QR8 312 aaKnown RBP12.61□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 TINF2Q9BSI4 451 aa12.61□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 JMJD4Q9H9V9 463 aa12.61□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 ZHX1Q9UKY1 873 aaPredicted RBP12.61□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 NAP1L2Q9ULW6 460 aaPredicted RBP12.61□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 SNX14Q9Y5W7 946 aa12.61□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 DDX49Q9Y6V7 483 aaKnown RBP12.61□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 PDE4DIPQ5VU43 2346 aa12.61□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 PFASO15067 1338 aa12.61□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 WDR19Q8NEZ3 1342 aa12.61□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 PALM3A6NDB9 673 aaPredicted RBP12.6□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 DDAH1O94760 285 aa12.6□□□□□ -0.39
CTD-2270F17.1-201ENST00000518387 CALML3P27482 149 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms