RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 KCTD1Q719H9 257 aa12.1□□□□□ -0.47
BRD9-216ENST00000518251 BRAPQ7Z569 592 aa12.1□□□□□ -0.47
BRD9-216ENST00000518251 ACER1Q8TDN7 264 aa12.1□□□□□ -0.47
BRD9-216ENST00000518251 PXYLP1Q8TE99 480 aa12.1□□□□□ -0.47
BRD9-216ENST00000518251 DIS3LQ8TF46 1054 aaKnown RBP12.1□□□□□ -0.47
BRD9-216ENST00000518251 PIBF1Q8WXW3 757 aa12.1□□□□□ -0.47
BRD9-216ENST00000518251 CHAMP1Q96JM3 812 aa12.1□□□□□ -0.47
BRD9-216ENST00000518251 FEZ1Q99689 392 aa12.1□□□□□ -0.47
BRD9-216ENST00000518251 UBA5Q9GZZ9 404 aa12.1□□□□□ -0.47
BRD9-216ENST00000518251 CPVLQ9H3G5 476 aa12.1□□□□□ -0.47
BRD9-216ENST00000518251 RIOX1Q9H6W3 641 aa12.1□□□□□ -0.47
BRD9-216ENST00000518251 VPS54Q9P1Q0 977 aa12.1□□□□□ -0.47
BRD9-216ENST00000518251 SEC63Q9UGP8 760 aaKnown RBP12.1□□□□□ -0.47
BRD9-216ENST00000518251 AFG3L2Q9Y4W6 797 aa12.1□□□□□ -0.47
BRD9-216ENST00000518251 PTPRFP10586 1907 aa12.09□□□□□ -0.47
BRD9-216ENST00000518251 KIF28PB7ZC32 967 aa12.09□□□□□ -0.47
BRD9-216ENST00000518251 hCG_1984214I3L0E3 225 aa12.09□□□□□ -0.47
BRD9-216ENST00000518251 EVI5O60447 810 aa12.09□□□□□ -0.47
BRD9-216ENST00000518251 BMP3P12645 472 aa12.09□□□□□ -0.47
BRD9-216ENST00000518251 DNM1Q05193 864 aaKnown RBP12.09□□□□□ -0.47
BRD9-216ENST00000518251 CSPP1Q1MSJ5 1256 aa12.09□□□□□ -0.47
BRD9-216ENST00000518251 FAM173BQ6P4H8 233 aa12.09□□□□□ -0.47
BRD9-216ENST00000518251 HOMER1Q86YM7 354 aa12.09□□□□□ -0.47
BRD9-216ENST00000518251 DIS3L2Q8IYB7 885 aaKnown RBP12.09□□□□□ -0.47
BRD9-216ENST00000518251 FAM177A1Q8N128 213 aaPredicted RBP12.09□□□□□ -0.47
BRD9-216ENST00000518251 ZNF713Q8N859 430 aaPredicted RBP12.09□□□□□ -0.47
BRD9-216ENST00000518251 CCDC148Q8NFR7 591 aa12.09□□□□□ -0.47
BRD9-216ENST00000518251 DEFB118Q96PH6 123 aa12.09□□□□□ -0.47
BRD9-216ENST00000518251 PHF20Q9BVI0 1012 aa12.09□□□□□ -0.47
BRD9-216ENST00000518251 CRISPLD2Q9H0B8 497 aa12.09□□□□□ -0.47
BRD9-216ENST00000518251 VCPKMTQ9H867 229 aa12.09□□□□□ -0.47
BRD9-216ENST00000518251 AS3MTQ9HBK9 375 aa12.09□□□□□ -0.47
BRD9-216ENST00000518251 BRMS1Q9HCU9 246 aa12.09□□□□□ -0.47
BRD9-216ENST00000518251 SH3GLB2Q9NR46 395 aa12.09□□□□□ -0.47
BRD9-216ENST00000518251 KCNJ14Q9UNX9 436 aa12.09□□□□□ -0.47
BRD9-216ENST00000518251 CNPY2Q9Y2B0 182 aa12.09□□□□□ -0.47
BRD9-216ENST00000518251 ZHX2Q9Y6X8 837 aa12.09□□□□□ -0.47
BRD9-216ENST00000518251 TRIOBPQ9H2D6 2365 aa12.09□□□□□ -0.47
BRD9-216ENST00000518251 ALPK3Q96L96 1907 aa12.09□□□□□ -0.47
BRD9-216ENST00000518251 FIBPO43427 364 aa12.08□□□□□ -0.48
BRD9-216ENST00000518251 KRT2P35908 639 aa12.08□□□□□ -0.48
BRD9-216ENST00000518251 NLRP5P59047 1200 aa12.08□□□□□ -0.48
BRD9-216ENST00000518251 WWC2Q6AWC2 1192 aa12.08□□□□□ -0.48
BRD9-216ENST00000518251 TTBK2Q6IQ55 1244 aa12.08□□□□□ -0.48
BRD9-216ENST00000518251 GADL1Q6ZQY3 521 aa12.08□□□□□ -0.48
BRD9-216ENST00000518251 FASTKD5Q7L8L6 764 aaKnown RBP12.08□□□□□ -0.48
BRD9-216ENST00000518251 HEATR3Q7Z4Q2 680 aa12.08□□□□□ -0.48
BRD9-216ENST00000518251 CCDC84Q86UT8 332 aaPredicted RBP12.08□□□□□ -0.48
BRD9-216ENST00000518251 TMEM87AQ8NBN3 555 aa12.08□□□□□ -0.48
BRD9-216ENST00000518251 SMCR8Q8TEV9 937 aaPredicted RBP12.08□□□□□ -0.48
BRD9-216ENST00000518251 CCDC12Q8WUD4 166 aaPredicted RBP12.08□□□□□ -0.48
BRD9-216ENST00000518251 GPKOWQ92917 476 aaPredicted RBP eCLIP12.08□□□□□ -0.48
BRD9-216ENST00000518251 ZNF396Q96N95 335 aaPredicted RBP12.08□□□□□ -0.48
BRD9-216ENST00000518251 PIGSQ96S52 555 aa12.08□□□□□ -0.48
BRD9-216ENST00000518251 FOXP1Q9H334 677 aaPredicted RBP12.08□□□□□ -0.48
BRD9-216ENST00000518251 VAT1LQ9HCJ6 419 aa12.08□□□□□ -0.48
BRD9-216ENST00000518251 PICK1Q9NRD5 415 aa12.08□□□□□ -0.48
BRD9-216ENST00000518251 AGTPBP1Q9UPW5 1226 aa12.08□□□□□ -0.48
BRD9-216ENST00000518251 TRIM75PA6NK02 468 aa12.07□□□□□ -0.48
BRD9-216ENST00000518251 STXBP3O00186 592 aa12.07□□□□□ -0.48
BRD9-216ENST00000518251 DLL1O00548 723 aa12.07□□□□□ -0.48
BRD9-216ENST00000518251 U2AF2P26368 475 aaKnown RBP eCLIP12.07□□□□□ -0.48
BRD9-216ENST00000518251 CALML3P27482 149 aa12.07□□□□□ -0.48
BRD9-216ENST00000518251 SLC16A2P36021 539 aa12.07□□□□□ -0.48
BRD9-216ENST00000518251 IKQ13123 557 aaPredicted RBP12.07□□□□□ -0.48
BRD9-216ENST00000518251 ZYXQ15942 572 aaKnown RBP12.07□□□□□ -0.48
BRD9-216ENST00000518251 FAM110CQ1W6H9 321 aa12.07□□□□□ -0.48
BRD9-216ENST00000518251 TREML2Q5T2D2 321 aa12.07□□□□□ -0.48
BRD9-216ENST00000518251 MYSM1Q5VVJ2 828 aa12.07□□□□□ -0.48
BRD9-216ENST00000518251 ATL3Q6DD88 541 aa12.07□□□□□ -0.48
BRD9-216ENST00000518251 ADGRF4Q8IZF3 695 aa12.07□□□□□ -0.48
BRD9-216ENST00000518251 SPICE1Q8N0Z3 855 aa12.07□□□□□ -0.48
BRD9-216ENST00000518251 ANKRD13CQ8N6S4 541 aa12.07□□□□□ -0.48
BRD9-216ENST00000518251 SLC17A8Q8NDX2 589 aa12.07□□□□□ -0.48
BRD9-216ENST00000518251 NUP88Q99567 741 aaPredicted RBP12.07□□□□□ -0.48
BRD9-216ENST00000518251 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.07□□□□□ -0.48
BRD9-216ENST00000518251 JMJD4Q9H9V9 463 aa12.07□□□□□ -0.48
BRD9-216ENST00000518251 GDPD2Q9HCC8 539 aa12.07□□□□□ -0.48
BRD9-216ENST00000518251 BARHL2Q9NY43 387 aa12.07□□□□□ -0.48
BRD9-216ENST00000518251 TMEM232C9JQI7 657 aa12.06□□□□□ -0.48
BRD9-216ENST00000518251 PRPF40AO75400 957 aaKnown RBP12.06□□□□□ -0.48
BRD9-216ENST00000518251 USP14P54578 494 aa12.06□□□□□ -0.48
BRD9-216ENST00000518251 NAPAP54920 295 aa12.06□□□□□ -0.48
BRD9-216ENST00000518251 FAM83BQ5T0W9 1011 aa12.06□□□□□ -0.48
BRD9-216ENST00000518251 SYDE2Q5VT97 1194 aa12.06□□□□□ -0.48
BRD9-216ENST00000518251 PPP1R18Q6NYC8 613 aa12.06□□□□□ -0.48
BRD9-216ENST00000518251 BTNL9Q6UXG8 535 aa12.06□□□□□ -0.48
BRD9-216ENST00000518251 NOSTRINQ8IVI9 506 aa12.06□□□□□ -0.48
BRD9-216ENST00000518251 C7orf61Q8IZ16 206 aa12.06□□□□□ -0.48
BRD9-216ENST00000518251 LPAR1Q92633 364 aa12.06□□□□□ -0.48
BRD9-216ENST00000518251 MTMR8Q96EF0 704 aa12.06□□□□□ -0.48
BRD9-216ENST00000518251 PAWRQ96IZ0 340 aaKnown RBP12.06□□□□□ -0.48
BRD9-216ENST00000518251 GDF15Q99988 308 aa12.06□□□□□ -0.48
BRD9-216ENST00000518251 WDR18Q9BV38 432 aa12.06□□□□□ -0.48
BRD9-216ENST00000518251 SCAND2PQ9GZW5 306 aaPredicted RBP12.06□□□□□ -0.48
BRD9-216ENST00000518251 KIAA1683Q9H0B3 1180 aa12.06□□□□□ -0.48
BRD9-216ENST00000518251 LMBRD1Q9NUN5 540 aa12.06□□□□□ -0.48
BRD9-216ENST00000518251 CFAP45Q9UL16 551 aa12.06□□□□□ -0.48
BRD9-216ENST00000518251 TCHHQ07283 1943 aa12.05□□□□□ -0.48
BRD9-216ENST00000518251 PNMA6FA0A0J9YX94 578 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms