RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 PRR23CQ6ZRP0 262 aa7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 FCRL3Q96P31 734 aaPredicted RBP7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 DSCC1Q9BVC3 393 aa7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 GPRC5CQ9NQ84 441 aa7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 CYP26B1Q9NR63 512 aa7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 STOML1Q9UBI4 398 aa7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 NDOR1Q9UHB4 597 aa7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 TCEAL9Q9UHQ7 104 aa7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 PLAGL2Q9UPG8 496 aa7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 ATP8A1Q9Y2Q0 1164 aa7.49□□□□□ -1.21
CTNNA1-202ENST00000517533 HOXC12P31275 282 aa7.48□□□□□ -1.21
CTNNA1-202ENST00000517533 GNALP38405 381 aa7.48□□□□□ -1.21
CTNNA1-202ENST00000517533 KCNJ6P48051 423 aa7.48□□□□□ -1.21
CTNNA1-202ENST00000517533 AMPD2Q01433 879 aa7.48□□□□□ -1.21
CTNNA1-202ENST00000517533 UBE4AQ14139 1066 aa7.48□□□□□ -1.21
CTNNA1-202ENST00000517533 KCNT2Q6UVM3 1135 aa7.48□□□□□ -1.21
CTNNA1-202ENST00000517533 STRA8Q7Z7C7 330 aa7.48□□□□□ -1.21
CTNNA1-202ENST00000517533 LRRTM3Q86VH5 581 aa7.48□□□□□ -1.21
CTNNA1-202ENST00000517533 MFSD4AQ8N468 514 aa7.48□□□□□ -1.21
CTNNA1-202ENST00000517533 NPLOC4Q8TAT6 608 aa7.48□□□□□ -1.21
CTNNA1-202ENST00000517533 FRS2Q8WU20 508 aa7.48□□□□□ -1.21
CTNNA1-202ENST00000517533 COPS5Q92905 334 aa7.48□□□□□ -1.21
CTNNA1-202ENST00000517533 SLC12A9Q9BXP2 914 aa7.48□□□□□ -1.21
CTNNA1-202ENST00000517533 UBA5Q9GZZ9 404 aa7.48□□□□□ -1.21
CTNNA1-202ENST00000517533 TPSG1Q9NRR2 321 aa7.48□□□□□ -1.21
CTNNA1-202ENST00000517533 SFMBT1Q9UHJ3 866 aa7.48□□□□□ -1.21
CTNNA1-202ENST00000517533 AURKAO14965 403 aa7.47□□□□□ -1.21
CTNNA1-202ENST00000517533 RASGRP1O95267 797 aa7.47□□□□□ -1.21
CTNNA1-202ENST00000517533 THBDP07204 575 aa7.47□□□□□ -1.21
CTNNA1-202ENST00000517533 CD3EP07766 207 aa7.47□□□□□ -1.21
CTNNA1-202ENST00000517533 C4orf46Q504U0 113 aa7.47□□□□□ -1.21
CTNNA1-202ENST00000517533 HSP90AB4PQ58FF6 505 aa7.47□□□□□ -1.21
CTNNA1-202ENST00000517533 RTP2Q5QGT7 225 aa7.47□□□□□ -1.21
CTNNA1-202ENST00000517533 SPTY2D1Q68D10 685 aaPredicted RBP7.47□□□□□ -1.21
CTNNA1-202ENST00000517533 CNNM4Q6P4Q7 775 aa7.47□□□□□ -1.21
CTNNA1-202ENST00000517533 CCDC103Q8IW40 242 aa7.47□□□□□ -1.21
CTNNA1-202ENST00000517533 SPACA3Q8IXA5 215 aa7.47□□□□□ -1.21
CTNNA1-202ENST00000517533 CRACR2BQ8N4Y2 399 aaPredicted RBP7.47□□□□□ -1.21
CTNNA1-202ENST00000517533 KCTD13Q8WZ19 329 aa7.47□□□□□ -1.21
CTNNA1-202ENST00000517533 TCTN2Q96GX1 697 aa7.47□□□□□ -1.21
CTNNA1-202ENST00000517533 COX4I2Q96KJ9 171 aa7.47□□□□□ -1.21
CTNNA1-202ENST00000517533 IPO9Q96P70 1041 aaKnown RBP7.47□□□□□ -1.21
CTNNA1-202ENST00000517533 GPR62Q9BZJ7 368 aa7.47□□□□□ -1.21
CTNNA1-202ENST00000517533 GTF2IRD1Q9UHL9 959 aa7.47□□□□□ -1.21
CTNNA1-202ENST00000517533 KCNH3Q9ULD8 1083 aa7.47□□□□□ -1.21
CTNNA1-202ENST00000517533 SF3B6Q9Y3B4 125 aaKnown RBP7.47□□□□□ -1.21
CTNNA1-202ENST00000517533 TNPO3Q9Y5L0 923 aaKnown RBP7.47□□□□□ -1.21
CTNNA1-202ENST00000517533 CNGA1P29973 690 aa7.46□□□□□ -1.22
CTNNA1-202ENST00000517533 GATA4P43694 442 aa7.46□□□□□ -1.22
CTNNA1-202ENST00000517533 FAM50AQ14320 339 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-202ENST00000517533 PCBP1Q15365 356 aaKnown RBP eCLIP7.46□□□□□ -1.22
CTNNA1-202ENST00000517533 RNF43Q68DV7 783 aa7.46□□□□□ -1.22
CTNNA1-202ENST00000517533 USP53Q70EK8 1073 aa7.46□□□□□ -1.22
CTNNA1-202ENST00000517533 DDX42Q86XP3 938 aaKnown RBP eCLIP7.46□□□□□ -1.22
CTNNA1-202ENST00000517533 USHBP1Q8N6Y0 703 aa7.46□□□□□ -1.22
CTNNA1-202ENST00000517533 DAGLBQ8NCG7 672 aa7.46□□□□□ -1.22
CTNNA1-202ENST00000517533 GIMAP7Q8NHV1 300 aa7.46□□□□□ -1.22
CTNNA1-202ENST00000517533 PIWIL2Q8TC59 973 aaKnown RBP7.46□□□□□ -1.22
CTNNA1-202ENST00000517533 SLC39A13Q96H72 371 aa7.46□□□□□ -1.22
CTNNA1-202ENST00000517533 MTFR1LQ9H019 292 aa7.46□□□□□ -1.22
CTNNA1-202ENST00000517533 SH3BP5O60239 455 aa7.45□□□□□ -1.22
CTNNA1-202ENST00000517533 MSCO60682 206 aa7.45□□□□□ -1.22
CTNNA1-202ENST00000517533 GSNP06396 782 aa7.45□□□□□ -1.22
CTNNA1-202ENST00000517533 ITIH2P19823 946 aa7.45□□□□□ -1.22
CTNNA1-202ENST00000517533 GABREP78334 506 aa7.45□□□□□ -1.22
CTNNA1-202ENST00000517533 LRRC41Q15345 812 aa7.45□□□□□ -1.22
CTNNA1-202ENST00000517533 SEPT7Q16181 437 aaKnown RBP7.45□□□□□ -1.22
CTNNA1-202ENST00000517533 NFE2Q16621 373 aaPredicted RBP7.45□□□□□ -1.22
CTNNA1-202ENST00000517533 CDKAL1Q5VV42 579 aa7.45□□□□□ -1.22
CTNNA1-202ENST00000517533 ABHD17CQ6PCB6 329 aa7.45□□□□□ -1.22
CTNNA1-202ENST00000517533 CHAC2Q8WUX2 184 aa7.45□□□□□ -1.22
CTNNA1-202ENST00000517533 DDX1Q92499 740 aaKnown RBP7.45□□□□□ -1.22
CTNNA1-202ENST00000517533 PTPRN2Q92932 1015 aa7.45□□□□□ -1.22
CTNNA1-202ENST00000517533 TERF2IPQ9NYB0 399 aa7.45□□□□□ -1.22
CTNNA1-202ENST00000517533 TSPAN6O43657 245 aa7.44□□□□□ -1.22
CTNNA1-202ENST00000517533 ALDH1L1O75891 902 aa7.44□□□□□ -1.22
CTNNA1-202ENST00000517533 LCP1P13796 627 aa7.44□□□□□ -1.22
CTNNA1-202ENST00000517533 VAV1P15498 845 aa7.44□□□□□ -1.22
CTNNA1-202ENST00000517533 KCNA6P17658 529 aa7.44□□□□□ -1.22
CTNNA1-202ENST00000517533 GAB4Q2WGN9 574 aa7.44□□□□□ -1.22
CTNNA1-202ENST00000517533 CYP27C1Q4G0S4 372 aa7.44□□□□□ -1.22
CTNNA1-202ENST00000517533 MBLAC2Q68D91 279 aa7.44□□□□□ -1.22
CTNNA1-202ENST00000517533 CCSAPQ6IQ19 270 aaPredicted RBP7.44□□□□□ -1.22
CTNNA1-202ENST00000517533 STYK1Q6J9G0 422 aa7.44□□□□□ -1.22
CTNNA1-202ENST00000517533 C11orf96Q7Z7L8 435 aa7.44□□□□□ -1.22
CTNNA1-202ENST00000517533 AFAP1L2Q8N4X5 818 aa7.44□□□□□ -1.22
CTNNA1-202ENST00000517533 ZNF655Q8N720 491 aaPredicted RBP7.44□□□□□ -1.22
CTNNA1-202ENST00000517533 CCDC140Q96MF4 163 aa7.44□□□□□ -1.22
CTNNA1-202ENST00000517533 HSPA12BQ96MM6 686 aa7.44□□□□□ -1.22
CTNNA1-202ENST00000517533 CAAP1Q9H8G2 361 aa7.44□□□□□ -1.22
CTNNA1-202ENST00000517533 SEMA3GQ9NS98 782 aa7.44□□□□□ -1.22
CTNNA1-202ENST00000517533 INTS7Q9NVH2 962 aaKnown RBP7.44□□□□□ -1.22
CTNNA1-202ENST00000517533 TCRBV16S1A1N1A0A5B0 115 aa7.43□□□□□ -1.22
CTNNA1-202ENST00000517533 C2orf71A6NGG8 1288 aa7.43□□□□□ -1.22
CTNNA1-202ENST00000517533 KIF3BO15066 747 aa7.43□□□□□ -1.22
CTNNA1-202ENST00000517533 ZNF205O95201 554 aa7.43□□□□□ -1.22
CTNNA1-202ENST00000517533 CRTAMO95727 393 aa7.43□□□□□ -1.22
CTNNA1-202ENST00000517533 BMP8BP34820 402 aa7.43□□□□□ -1.22
CTNNA1-202ENST00000517533 CEBPAP49715 358 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-202ENST00000517533 POU4F1Q01851 419 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms