RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 GRIN2DO15399 1336 aa10.27□□□□□ -0.77
PABPC1-202ENST00000517403 UMODL1Q5DID0 1318 aa10.27□□□□□ -0.77
PABPC1-202ENST00000517403 PTPRSQ13332 1948 aa10.27□□□□□ -0.77
PABPC1-202ENST00000517403 ERC2O15083 957 aa10.26□□□□□ -0.77
PABPC1-202ENST00000517403 ORC4O43929 436 aa10.26□□□□□ -0.77
PABPC1-202ENST00000517403 GSPT1P15170 499 aaKnown RBP10.26□□□□□ -0.77
PABPC1-202ENST00000517403 ACLYP53396 1101 aa10.26□□□□□ -0.77
PABPC1-202ENST00000517403 BEX3Q00994 111 aa10.26□□□□□ -0.77
PABPC1-202ENST00000517403 FAAP100Q0VG06 881 aa10.26□□□□□ -0.77
PABPC1-202ENST00000517403 SMYD5Q6GMV2 418 aa10.26□□□□□ -0.77
PABPC1-202ENST00000517403 CCDC174Q6PII3 467 aa10.26□□□□□ -0.77
PABPC1-202ENST00000517403 ZNF444Q8N0Y2 327 aaPredicted RBP10.26□□□□□ -0.77
PABPC1-202ENST00000517403 EVI5LQ96CN4 794 aa10.26□□□□□ -0.77
PABPC1-202ENST00000517403 TMEM47Q9BQJ4 181 aa10.26□□□□□ -0.77
PABPC1-202ENST00000517403 UPF3AQ9H1J1 476 aaKnown RBP10.26□□□□□ -0.77
PABPC1-202ENST00000517403 TTYH1Q9H313 450 aaPredicted RBP10.26□□□□□ -0.77
PABPC1-202ENST00000517403 PRDM5Q9NQX1 630 aaPredicted RBP10.26□□□□□ -0.77
PABPC1-202ENST00000517403 FEM1BQ9UK73 627 aa10.26□□□□□ -0.77
PABPC1-202ENST00000517403 DIS3Q9Y2L1 958 aaKnown RBP10.26□□□□□ -0.77
PABPC1-202ENST00000517403 CCDC171Q6TFL3 1326 aa10.26□□□□□ -0.77
PABPC1-202ENST00000517403 SYNGAP1Q96PV0 1343 aa10.26□□□□□ -0.77
PABPC1-202ENST00000517403 SCN5AQ14524 2016 aa10.26□□□□□ -0.77
PABPC1-202ENST00000517403 UNC80Q8N2C7 3258 aa10.25□□□□□ -0.77
PABPC1-202ENST00000517403 PRUNE2Q8WUY3 3088 aa10.25□□□□□ -0.77
PABPC1-202ENST00000517403 KBTBD13C9JR72 458 aa10.25□□□□□ -0.77
PABPC1-202ENST00000517403 POTEB2H3BUK9 544 aa10.25□□□□□ -0.77
PABPC1-202ENST00000517403 PQBP1O60828 265 aaKnown RBP10.25□□□□□ -0.77
PABPC1-202ENST00000517403 RARBP10826 455 aa10.25□□□□□ -0.77
PABPC1-202ENST00000517403 AKR1A1P14550 325 aa10.25□□□□□ -0.77
PABPC1-202ENST00000517403 ACVR2BQ13705 512 aa10.25□□□□□ -0.77
PABPC1-202ENST00000517403 ALX1Q15699 326 aa10.25□□□□□ -0.77
PABPC1-202ENST00000517403 KCNA10Q16322 511 aa10.25□□□□□ -0.77
PABPC1-202ENST00000517403 CCDC144BQ3MJ40 725 aa10.25□□□□□ -0.77
PABPC1-202ENST00000517403 C1orf53Q5VUE5 145 aa10.25□□□□□ -0.77
PABPC1-202ENST00000517403 C16orf59Q7L2K0 433 aa10.25□□□□□ -0.77
PABPC1-202ENST00000517403 SKAP1Q86WV1 359 aa10.25□□□□□ -0.77
PABPC1-202ENST00000517403 FBXO16Q8IX29 292 aaPredicted RBP10.25□□□□□ -0.77
PABPC1-202ENST00000517403 FBXO22Q8NEZ5 403 aa10.25□□□□□ -0.77
PABPC1-202ENST00000517403 CLEC4DQ8WXI8 215 aa10.25□□□□□ -0.77
PABPC1-202ENST00000517403 ZKSCAN3Q9BRR0 538 aa10.25□□□□□ -0.77
PABPC1-202ENST00000517403 TBX21Q9UL17 535 aa10.25□□□□□ -0.77
PABPC1-202ENST00000517403 SYNPO2Q9UMS6 1093 aa10.25□□□□□ -0.77
PABPC1-202ENST00000517403 STX8Q9UNK0 236 aa10.25□□□□□ -0.77
PABPC1-202ENST00000517403 GNEQ9Y223 722 aaKnown RBP10.25□□□□□ -0.77
PABPC1-202ENST00000517403 ZMYM6O95789 1325 aa10.25□□□□□ -0.77
PABPC1-202ENST00000517403 TANC1Q9C0D5 1861 aa10.25□□□□□ -0.77
PABPC1-202ENST00000517403 TSPY2A6NKD2 308 aa10.24□□□□□ -0.77
PABPC1-202ENST00000517403 PDHBP11177 359 aa10.24□□□□□ -0.77
PABPC1-202ENST00000517403 ALAS1P13196 640 aa10.24□□□□□ -0.77
PABPC1-202ENST00000517403 SMPD1P17405 629 aa10.24□□□□□ -0.77
PABPC1-202ENST00000517403 SDSP20132 328 aa10.24□□□□□ -0.77
PABPC1-202ENST00000517403 CST5P28325 142 aaPredicted RBP10.24□□□□□ -0.77
PABPC1-202ENST00000517403 SLC1A4P43007 532 aa10.24□□□□□ -0.77
PABPC1-202ENST00000517403 STAT2P52630 851 aa10.24□□□□□ -0.77
PABPC1-202ENST00000517403 IRX6P78412 446 aaPredicted RBP10.24□□□□□ -0.77
PABPC1-202ENST00000517403 NUCB1Q02818 461 aa10.24□□□□□ -0.77
PABPC1-202ENST00000517403 RRP12Q5JTH9 1297 aaKnown RBP10.24□□□□□ -0.77
PABPC1-202ENST00000517403 TAPT1Q6NXT6 567 aa10.24□□□□□ -0.77
PABPC1-202ENST00000517403 EEPD1Q7L9B9 569 aa10.24□□□□□ -0.77
PABPC1-202ENST00000517403 KRI1Q8N9T8 703 aaKnown RBP10.24□□□□□ -0.77
PABPC1-202ENST00000517403 STAG1Q8WVM7 1258 aa10.24□□□□□ -0.77
PABPC1-202ENST00000517403 RANBP17Q9H2T7 1088 aaKnown RBP10.24□□□□□ -0.77
PABPC1-202ENST00000517403 GPCPD1Q9NPB8 672 aa10.24□□□□□ -0.77
PABPC1-202ENST00000517403 HELLSQ9NRZ9 838 aa10.24□□□□□ -0.77
PABPC1-202ENST00000517403 CYP39A1Q9NYL5 469 aa10.24□□□□□ -0.77
PABPC1-202ENST00000517403 NRBP1Q9UHY1 535 aa10.24□□□□□ -0.77
PABPC1-202ENST00000517403 REV3LO60673 3130 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 CHD9Q3L8U1 2897 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 KIAA0355O15063 1070 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 RANBP6O60518 1105 aaKnown RBP10.23□□□□□ -0.77
PABPC1-202ENST00000517403 ASGR1P07306 291 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 GOLGA8HP0CJ92 632 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 SNHG28P0DPA3 235 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 CDK7P50613 346 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 OAZ1P54368 228 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 NKX3-2P78367 333 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 PDE4BQ07343 736 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 MCMDC2Q4G0Z9 681 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 BTNL9Q6UXG8 535 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 CHD1LQ86WJ1 897 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 FAM126BQ8IXS8 530 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 ZNF579Q8NAF0 562 aaKnown RBP10.23□□□□□ -0.77
PABPC1-202ENST00000517403 ARRDC4Q8NCT1 418 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 TBC1D5Q92609 795 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 DDX11Q96FC9 970 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 NACAP1Q9BZK3 213 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 ACAD9Q9H845 621 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 SENP2Q9HC62 589 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 COL20A1Q9P218 1284 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 SCN10AQ9Y5Y9 1956 aa10.23□□□□□ -0.77
PABPC1-202ENST00000517403 GRXCR1A8MXD5 290 aa10.22□□□□□ -0.77
PABPC1-202ENST00000517403 OPLAHO14841 1288 aa10.22□□□□□ -0.77
PABPC1-202ENST00000517403 PLA2G6O60733 806 aa10.22□□□□□ -0.77
PABPC1-202ENST00000517403 ZBED4O75132 1171 aa10.22□□□□□ -0.77
PABPC1-202ENST00000517403 DUSP11O75319 330 aaKnown RBP10.22□□□□□ -0.77
PABPC1-202ENST00000517403 CLTBP09497 229 aa10.22□□□□□ -0.77
PABPC1-202ENST00000517403 C6orf222P0C671 652 aaPredicted RBP10.22□□□□□ -0.77
PABPC1-202ENST00000517403 GJA9P57773 515 aa10.22□□□□□ -0.77
PABPC1-202ENST00000517403 PSMC6P62333 389 aa10.22□□□□□ -0.77
PABPC1-202ENST00000517403 CCDC96Q2M329 555 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms