RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 CCDC194A0A1B0GVG4 234 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 E2F8A0AVK6 867 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 CBX4O00257 560 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 ZNF205O95201 554 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 RASGRP1O95267 797 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 CRTAMO95727 393 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 THBDP07204 575 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 JMJD7P0C870 316 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 BMP3P12645 472 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 COL8A1P27658 744 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 LTBRP36941 435 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 GUCY2FP51841 1108 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 NEK2P51955 445 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 TBX4P57082 545 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 DSG1Q02413 1049 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 PCBP1Q15365 356 aaKnown RBP eCLIP4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 CPSF6Q16630 551 aaKnown RBP eCLIP4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 PRSS53Q2L4Q9 553 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 EEF1DP3Q658K8 133 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 IQCEQ6IPM2 695 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 CCSAPQ6IQ19 270 aaPredicted RBP4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 UBE2R2Q712K3 238 aaPredicted RBP4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 ZAR1Q86SH2 424 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 CLEC10AQ8IUN9 316 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 PPIL6Q8IXY8 311 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 MFSD4AQ8N468 514 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 UBR7Q8N806 425 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 OR2W6PQ8NHA6 318 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 ATL2Q8NHH9 583 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 WDR66Q8TBY9 1149 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 MMP19Q99542 508 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 TTC1Q99614 292 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 MENTQ9BUN1 341 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 CHMP4AQ9BY43 222 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 CRTAC1Q9NQ79 661 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 G3BP2Q9UN86 482 aaKnown RBP4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 SPEF1Q9Y4P9 236 aa4.55□□□□□ -1.68
RNU6-840P-201ENST00000517275 CNTNAP4Q9C0A0 1308 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 SHISA3A0PJX4 238 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 MEFVO15553 781 aaPredicted RBP4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 DHX15O43143 795 aaKnown RBP4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 KPNA6O60684 536 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 LRRN2O75325 713 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 F2P00734 622 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 APPP05067 770 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 KCNJ6P48051 423 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 IREB2P48200 963 aaKnown RBP4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 MECP2P51608 486 aaKnown RBP4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 EVA1CP58658 441 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 KRT85P78386 507 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 TNK2Q07912 1038 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 MTMR1Q13613 665 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 PPP2R5DQ14738 602 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 KIZQ2M2Z5 673 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 CFAP100Q494V2 611 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 CDCA2Q69YH5 1023 aaPredicted RBP4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 CWF19L1Q69YN2 538 aaKnown RBP4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 ABHD17CQ6PCB6 329 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 OGFOD3Q6PK18 319 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 CRTC3Q6UUV7 619 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 LBX2Q6XYB7 198 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 USP53Q70EK8 1073 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 THAP5Q7Z6K1 395 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 DDX53Q86TM3 631 aaKnown RBP4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 FMNL3Q8IVF7 1028 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 IFNL3Q8IZI9 196 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 Q8N1Y9 231 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 LINC00116Q8NCU8 138 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 LEO1Q8WVC0 666 aaPredicted RBP4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 HEXIM2Q96MH2 286 aaKnown RBP4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 FAM83CQ9BQN1 747 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 PHF20Q9BVI0 1012 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 SLC12A9Q9BXP2 914 aa4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 ASCC2Q9H1I8 757 aaPredicted RBP4.54□□□□□ -1.68
RNU6-840P-201ENST00000517275 BLACEA4D250 179 aa4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 STXBP3O00186 592 aa4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 TSPAN6O43657 245 aa4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 LEFTY1O75610 366 aa4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 CKMP06732 381 aa4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 FAM87AP0C7U9 286 aa4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 ECI1P42126 302 aa4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 NOP2P46087 812 aaKnown RBP4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 NEK4P51957 841 aa4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 CYP27A1Q02318 531 aa4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 STRN3Q13033 797 aa4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 HLTFQ14527 1009 aaKnown RBP eCLIP4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 GAB4Q2WGN9 574 aa4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 RTP2Q5QGT7 225 aa4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 CCDC103Q8IW40 242 aa4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 SMC1BQ8NDV3 1235 aa4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 PANK1Q8TE04 598 aa4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 CHMP4CQ96CF2 233 aa4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 SCARF2Q96GP6 870 aaPredicted RBP4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 FCRL3Q96P31 734 aaPredicted RBP4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 CDH19Q9H159 772 aa4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 TRIT1Q9H3H1 467 aaKnown RBP4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 SLC5A4Q9NY91 659 aa4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 TCEAL9Q9UHQ7 104 aa4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 TRAF6Q9Y4K3 522 aa4.53□□□□□ -1.68
RNU6-840P-201ENST00000517275 C2orf71A6NGG8 1288 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms