RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 ICAM1P05362 532 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 MARCKSP29966 332 aaPredicted RBP10.78□□□□□ -0.68
TPM3-222ENST00000515609 MCM7P33993 719 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 SYKP43405 635 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 MRE11P49959 708 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 TOB1P50616 345 aaPredicted RBP10.78□□□□□ -0.68
TPM3-222ENST00000515609 USP17L24Q0WX57 530 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 PTGDRQ13258 359 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 COG2Q14746 738 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 ZYXQ15942 572 aaKnown RBP10.78□□□□□ -0.68
TPM3-222ENST00000515609 TMEM266Q2M3C6 531 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 SLC35G1Q2M3R5 365 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 TKFCQ3LXA3 575 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 SH3D19Q5HYK7 790 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 RESP18Q5W5W9 173 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 PPP4R3AQ6IN85 833 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 SASS6Q6UVJ0 657 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 LRSAM1Q6UWE0 723 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 DTHD1Q6ZMT9 781 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 CDAN1Q8IWY9 1227 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 ZKSCAN4Q969J2 545 aaPredicted RBP10.78□□□□□ -0.68
TPM3-222ENST00000515609 COA7Q96BR5 231 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 CDCA5Q96FF9 252 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 CHAMP1Q96JM3 812 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 NUP88Q99567 741 aaPredicted RBP10.78□□□□□ -0.68
TPM3-222ENST00000515609 CPVLQ9H3G5 476 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 CLSTN2Q9H4D0 955 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 PCDHB6Q9Y5E3 794 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 WDR90Q96KV7 1748 aa10.78□□□□□ -0.68
TPM3-222ENST00000515609 ATAD5Q96QE3 1844 aa10.77□□□□□ -0.68
TPM3-222ENST00000515609 GCOM1H8Y6P7 765 aaPredicted RBP10.77□□□□□ -0.69
TPM3-222ENST00000515609 SLC26A4O43511 780 aa10.77□□□□□ -0.69
TPM3-222ENST00000515609 MARCH6O60337 910 aa10.77□□□□□ -0.69
TPM3-222ENST00000515609 NEMFO60524 1076 aa10.77□□□□□ -0.69
TPM3-222ENST00000515609 CCNT1O60563 726 aaKnown RBP10.77□□□□□ -0.69
TPM3-222ENST00000515609 POLR2MP0CAP2 368 aa10.77□□□□□ -0.69
TPM3-222ENST00000515609 SLURP2P0DP57 97 aa10.77□□□□□ -0.69
TPM3-222ENST00000515609 VCAM1P19320 739 aa10.77□□□□□ -0.69
TPM3-222ENST00000515609 INF2Q27J81 1249 aa10.77□□□□□ -0.69
TPM3-222ENST00000515609 SHROOM1Q2M3G4 852 aaPredicted RBP10.77□□□□□ -0.69
TPM3-222ENST00000515609 AXDND1Q5T1B0 1012 aaPredicted RBP10.77□□□□□ -0.69
TPM3-222ENST00000515609 TYW1BQ6NUM6 668 aa10.77□□□□□ -0.69
TPM3-222ENST00000515609 FASTKD5Q7L8L6 764 aaKnown RBP10.77□□□□□ -0.69
TPM3-222ENST00000515609 LDHDQ86WU2 507 aa10.77□□□□□ -0.69
TPM3-222ENST00000515609 MB21D1Q8N884 522 aa10.77□□□□□ -0.69
TPM3-222ENST00000515609 PROCA1Q8NCQ7 364 aaPredicted RBP10.77□□□□□ -0.69
TPM3-222ENST00000515609 TBCKQ8TEA7 893 aa10.77□□□□□ -0.69
TPM3-222ENST00000515609 FTOQ9C0B1 505 aaKnown RBP eCLIP10.77□□□□□ -0.69
TPM3-222ENST00000515609 NAT10Q9H0A0 1025 aaKnown RBP10.77□□□□□ -0.69
TPM3-222ENST00000515609 TSPY26PQ9H489 355 aa10.77□□□□□ -0.69
TPM3-222ENST00000515609 RPAP3Q9H6T3 665 aaPredicted RBP10.77□□□□□ -0.69
TPM3-222ENST00000515609 TMEM63CQ9P1W3 806 aa10.77□□□□□ -0.69
TPM3-222ENST00000515609 BIN2Q9UBW5 565 aaPredicted RBP10.77□□□□□ -0.69
TPM3-222ENST00000515609 CCDC39Q9UFE4 941 aa10.77□□□□□ -0.69
TPM3-222ENST00000515609 PPP1R9AQ9ULJ8 1098 aa10.77□□□□□ -0.69
TPM3-222ENST00000515609 ZNF202O95125 648 aa10.76□□□□□ -0.69
TPM3-222ENST00000515609 OR52Z1P0C646 297 aa10.76□□□□□ -0.69
TPM3-222ENST00000515609 COPB2P35606 906 aa10.76□□□□□ -0.69
TPM3-222ENST00000515609 CLK2P49760 499 aaKnown RBP10.76□□□□□ -0.69
TPM3-222ENST00000515609 SEMA3FQ13275 785 aa10.76□□□□□ -0.69
TPM3-222ENST00000515609 VGLL4Q14135 290 aa10.76□□□□□ -0.69
TPM3-222ENST00000515609 ZNF174Q15697 407 aa10.76□□□□□ -0.69
TPM3-222ENST00000515609 LETM2Q2VYF4 491 aa10.76□□□□□ -0.69
TPM3-222ENST00000515609 USH1GQ495M9 461 aa10.76□□□□□ -0.69
TPM3-222ENST00000515609 JAKMIP3Q5VZ66 844 aa10.76□□□□□ -0.69
TPM3-222ENST00000515609 SLFN12Q8IYM2 578 aa10.76□□□□□ -0.69
TPM3-222ENST00000515609 CEP57L1Q8IYX8 460 aa10.76□□□□□ -0.69
TPM3-222ENST00000515609 FMR1NBQ8N0W7 255 aaPredicted RBP10.76□□□□□ -0.69
TPM3-222ENST00000515609 GTF3C2Q8WUA4 911 aaPredicted RBP10.76□□□□□ -0.69
TPM3-222ENST00000515609 GTPBP4Q9BZE4 634 aaKnown RBP10.76□□□□□ -0.69
TPM3-222ENST00000515609 FBXO2Q9UK22 296 aaPredicted RBP10.76□□□□□ -0.69
TPM3-222ENST00000515609 KCNH3Q9ULD8 1083 aa10.76□□□□□ -0.69
TPM3-222ENST00000515609 CCPG1Q9ULG6 757 aa10.76□□□□□ -0.69
TPM3-222ENST00000515609 AFG3L2Q9Y4W6 797 aa10.76□□□□□ -0.69
TPM3-222ENST00000515609 SYCE3A1L190 88 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 SPDYE5A6NIY4 337 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 ADM5C9JUS6 153 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 ATP2A1O14983 1001 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 TBX3O15119 743 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 PPP1R11O60927 126 aaPredicted RBP10.75□□□□□ -0.69
TPM3-222ENST00000515609 NR1I2O75469 434 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 PFKFB1P16118 471 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 LIG1P18858 919 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 UBA7P41226 1012 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 PPIL2Q13356 520 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 PDIA5Q14554 519 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 CALCRLQ16602 461 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 TPRNQ4KMQ1 711 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 PRAMEF18Q5VWM3 479 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.75□□□□□ -0.69
TPM3-222ENST00000515609 RASGRP2Q7LDG7 609 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 C2orf69Q8N8R5 385 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 IQUBQ8NA54 791 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 ENGASEQ8NFI3 743 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 SHISA4Q96DD7 197 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 ANO3Q9BYT9 981 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 CUEDC2Q9H467 287 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 MAGEF1Q9HAY2 307 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 SLC38A10Q9HBR0 1119 aa10.75□□□□□ -0.69
TPM3-222ENST00000515609 EMILIN3Q9NT22 766 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms