RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 NBPF11Q86T75 865 aa17.46■□□□□ 0.39
PDCD6-211ENST00000515587 CMTR1Q8N1G2 835 aaKnown RBP17.46■□□□□ 0.39
PDCD6-211ENST00000515587 CHST13Q8NET6 341 aa17.46■□□□□ 0.39
PDCD6-211ENST00000515587 PIBF1Q8WXW3 757 aa17.46■□□□□ 0.39
PDCD6-211ENST00000515587 ZSCAN31Q96LW9 406 aaPredicted RBP17.46■□□□□ 0.39
PDCD6-211ENST00000515587 PIGSQ96S52 555 aa17.46■□□□□ 0.39
PDCD6-211ENST00000515587 TMEM106CQ9BVX2 250 aa17.46■□□□□ 0.39
PDCD6-211ENST00000515587 PORCNQ9H237 461 aa17.46■□□□□ 0.39
PDCD6-211ENST00000515587 EFCC1Q9HA90 598 aa17.46■□□□□ 0.39
PDCD6-211ENST00000515587 ZNF536O15090 1300 aa17.46■□□□□ 0.38
PDCD6-211ENST00000515587 ZNFX1Q9P2E3 1918 aaKnown RBP17.45■□□□□ 0.38
PDCD6-211ENST00000515587 PNMA6FA0A0J9YX94 578 aa17.45■□□□□ 0.38
PDCD6-211ENST00000515587 CYTH3O43739 400 aa17.45■□□□□ 0.38
PDCD6-211ENST00000515587 STRNO43815 780 aa17.45■□□□□ 0.38
PDCD6-211ENST00000515587 PFKFB2O60825 505 aa17.45■□□□□ 0.38
PDCD6-211ENST00000515587 CDKL5O76039 1030 aa17.45■□□□□ 0.38
PDCD6-211ENST00000515587 MCM2P49736 904 aa17.45■□□□□ 0.38
PDCD6-211ENST00000515587 AKAP17AQ02040 695 aaKnown RBP17.45■□□□□ 0.38
PDCD6-211ENST00000515587 USH1GQ495M9 461 aa17.45■□□□□ 0.38
PDCD6-211ENST00000515587 GPR142Q7Z601 462 aa17.45■□□□□ 0.38
PDCD6-211ENST00000515587 MTMR8Q96EF0 704 aa17.45■□□□□ 0.38
PDCD6-211ENST00000515587 TRIM47Q96LD4 638 aa17.45■□□□□ 0.38
PDCD6-211ENST00000515587 AMNQ9BXJ7 453 aa17.45■□□□□ 0.38
PDCD6-211ENST00000515587 ARHGAP39Q9C0H5 1083 aa17.45■□□□□ 0.38
PDCD6-211ENST00000515587 NCOA5Q9HCD5 579 aaKnown RBP17.45■□□□□ 0.38
PDCD6-211ENST00000515587 HOMER2Q9NSB8 354 aa17.45■□□□□ 0.38
PDCD6-211ENST00000515587 RNF146Q9NTX7 359 aa17.45■□□□□ 0.38
PDCD6-211ENST00000515587 FAM217BQ9NTX9 383 aaPredicted RBP17.45■□□□□ 0.38
PDCD6-211ENST00000515587 DOCK3Q8IZD9 2030 aa17.45■□□□□ 0.38
PDCD6-211ENST00000515587 ABCB11O95342 1321 aa17.45■□□□□ 0.38
PDCD6-211ENST00000515587 SMCHD1A6NHR9 2005 aa17.44■□□□□ 0.38
PDCD6-211ENST00000515587 FCER1AP12319 257 aa17.44■□□□□ 0.38
PDCD6-211ENST00000515587 KCTD2Q14681 263 aa17.44■□□□□ 0.38
PDCD6-211ENST00000515587 TRIM22Q8IYM9 498 aa17.44■□□□□ 0.38
PDCD6-211ENST00000515587 ZNF333Q96JL9 665 aa17.44■□□□□ 0.38
PDCD6-211ENST00000515587 TRERF1Q96PN7 1200 aa17.44■□□□□ 0.38
PDCD6-211ENST00000515587 MMP19Q99542 508 aa17.44■□□□□ 0.38
PDCD6-211ENST00000515587 ACAD9Q9H845 621 aa17.44■□□□□ 0.38
PDCD6-211ENST00000515587 CNTNAP5Q8WYK1 1306 aa17.44■□□□□ 0.38
PDCD6-211ENST00000515587 A0A0C4DFX4 3053 aa17.43■□□□□ 0.38
PDCD6-211ENST00000515587 SLC15A5A6NIM6 579 aa17.43■□□□□ 0.38
PDCD6-211ENST00000515587 IFNAR1P17181 557 aa17.43■□□□□ 0.38
PDCD6-211ENST00000515587 PRMT2P55345 433 aa17.43■□□□□ 0.38
PDCD6-211ENST00000515587 ME3Q16798 604 aa17.43■□□□□ 0.38
PDCD6-211ENST00000515587 SLC35G1Q2M3R5 365 aa17.43■□□□□ 0.38
PDCD6-211ENST00000515587 SOCS4Q8WXH5 440 aa17.43■□□□□ 0.38
PDCD6-211ENST00000515587 NUDT12Q9BQG2 462 aa17.43■□□□□ 0.38
PDCD6-211ENST00000515587 SH2B1Q9NRF2 756 aaPredicted RBP17.43■□□□□ 0.38
PDCD6-211ENST00000515587 MRPL11Q9Y3B7 192 aaKnown RBP17.43■□□□□ 0.38
PDCD6-211ENST00000515587 RIPK3Q9Y572 518 aa17.43■□□□□ 0.38
PDCD6-211ENST00000515587 ZNF236Q9UL36 1845 aa17.42■□□□□ 0.38
PDCD6-211ENST00000515587 PTPREP23469 700 aa17.42■□□□□ 0.38
PDCD6-211ENST00000515587 CTGFP29279 349 aa17.42■□□□□ 0.38
PDCD6-211ENST00000515587 SSRP1Q08945 709 aaKnown RBP17.42■□□□□ 0.38
PDCD6-211ENST00000515587 SCRN1Q12765 414 aa17.42■□□□□ 0.38
PDCD6-211ENST00000515587 ABRAQ8N0Z2 381 aa17.42■□□□□ 0.38
PDCD6-211ENST00000515587 ANKRD35Q8N283 1001 aa17.42■□□□□ 0.38
PDCD6-211ENST00000515587 GTF3C6Q969F1 213 aa17.42■□□□□ 0.38
PDCD6-211ENST00000515587 SLC5A4Q9NY91 659 aa17.42■□□□□ 0.38
PDCD6-211ENST00000515587 PCDHA1Q9Y5I3 950 aa17.42■□□□□ 0.38
PDCD6-211ENST00000515587 V9GY48 417 aaPredicted RBP17.42■□□□□ 0.38
PDCD6-211ENST00000515587 RANBP2P49792 3224 aaKnown RBP17.42■□□□□ 0.38
PDCD6-211ENST00000515587 MYCP01106 439 aaPredicted RBP17.41■□□□□ 0.38
PDCD6-211ENST00000515587 FUT2Q10981 343 aa17.41■□□□□ 0.38
PDCD6-211ENST00000515587 NECAB1Q8N987 351 aa17.41■□□□□ 0.38
PDCD6-211ENST00000515587 DDX11Q96FC9 970 aa17.41■□□□□ 0.38
PDCD6-211ENST00000515587 SLC26A6Q9BXS9 759 aa17.41■□□□□ 0.38
PDCD6-211ENST00000515587 RNF26Q9BY78 433 aaPredicted RBP17.41■□□□□ 0.38
PDCD6-211ENST00000515587 SRRDQ9UH36 339 aa17.41■□□□□ 0.38
PDCD6-211ENST00000515587 PLXNA1Q9UIW2 1896 aa17.41■□□□□ 0.38
PDCD6-211ENST00000515587 PFASO15067 1338 aa17.41■□□□□ 0.38
PDCD6-211ENST00000515587 hCG_1642624A0A1W2PR95 340 aa17.4■□□□□ 0.38
PDCD6-211ENST00000515587 PRPF3O43395 683 aaKnown RBP17.4■□□□□ 0.38
PDCD6-211ENST00000515587 LARGE1O95461 756 aa17.4■□□□□ 0.38
PDCD6-211ENST00000515587 RGS2P41220 211 aa17.4■□□□□ 0.38
PDCD6-211ENST00000515587 GRB14Q14449 540 aa17.4■□□□□ 0.38
PDCD6-211ENST00000515587 NTRK3Q16288 839 aa17.4■□□□□ 0.38
PDCD6-211ENST00000515587 HEATR3Q7Z4Q2 680 aa17.4■□□□□ 0.38
PDCD6-211ENST00000515587 DPP9Q86TI2 863 aa17.4■□□□□ 0.38
PDCD6-211ENST00000515587 MCF2L2Q86YR7 1114 aa17.4■□□□□ 0.38
PDCD6-211ENST00000515587 RAET1EQ8TD07 263 aa17.4■□□□□ 0.38
PDCD6-211ENST00000515587 PHKBQ93100 1093 aa17.4■□□□□ 0.38
PDCD6-211ENST00000515587 hCG_1984214I3L0E3 225 aa17.39■□□□□ 0.37
PDCD6-211ENST00000515587 PPP1R11O60927 126 aaPredicted RBP17.39■□□□□ 0.37
PDCD6-211ENST00000515587 ADORA2AP29274 412 aa17.39■□□□□ 0.37
PDCD6-211ENST00000515587 PRKCZQ05513 592 aa17.39■□□□□ 0.37
PDCD6-211ENST00000515587 MAP2K5Q13163 448 aa17.39■□□□□ 0.37
PDCD6-211ENST00000515587 MUM1L1Q5H9M0 696 aa17.39■□□□□ 0.37
PDCD6-211ENST00000515587 MORN1Q5T089 497 aa17.39■□□□□ 0.37
PDCD6-211ENST00000515587 NSMFQ6X4W1 530 aa17.39■□□□□ 0.37
PDCD6-211ENST00000515587 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.39■□□□□ 0.37
PDCD6-211ENST00000515587 ZNF713Q8N859 430 aaPredicted RBP17.39■□□□□ 0.37
PDCD6-211ENST00000515587 MAF1Q9H063 256 aa17.39■□□□□ 0.37
PDCD6-211ENST00000515587 COL6A3P12111 3177 aa17.38■□□□□ 0.37
PDCD6-211ENST00000515587 SCG2P13521 617 aa17.38■□□□□ 0.37
PDCD6-211ENST00000515587 TAL1P17542 331 aaPredicted RBP17.38■□□□□ 0.37
PDCD6-211ENST00000515587 FLT3LGP49771 235 aa17.38■□□□□ 0.37
PDCD6-211ENST00000515587 PFKFB3Q16875 520 aaPredicted RBP17.38■□□□□ 0.37
PDCD6-211ENST00000515587 RNF207Q6ZRF8 634 aa17.38■□□□□ 0.37
PDCD6-211ENST00000515587 CCDC83Q8IWF9 413 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms