RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 PARP1P09874 1014 aaKnown RBP17.33■□□□□ 0.36
HMGCLL1-209ENST00000515546 CDC37Q16543 378 aaPredicted RBP17.33■□□□□ 0.36
HMGCLL1-209ENST00000515546 C7orf61Q8IZ16 206 aa17.33■□□□□ 0.36
HMGCLL1-209ENST00000515546 ADGRF4Q8IZF3 695 aa17.33■□□□□ 0.36
HMGCLL1-209ENST00000515546 MORC4Q8TE76 937 aa17.33■□□□□ 0.36
HMGCLL1-209ENST00000515546 LENG1Q96BZ8 264 aaPredicted RBP17.33■□□□□ 0.36
HMGCLL1-209ENST00000515546 ZHX1Q9UKY1 873 aaPredicted RBP17.33■□□□□ 0.36
HMGCLL1-209ENST00000515546 FAM184BQ9ULE4 1060 aa17.33■□□□□ 0.36
HMGCLL1-209ENST00000515546 COLQQ9Y215 455 aaPredicted RBP17.33■□□□□ 0.36
HMGCLL1-209ENST00000515546 TRIOBPQ9H2D6 2365 aa17.32■□□□□ 0.36
HMGCLL1-209ENST00000515546 SMCHD1A6NHR9 2005 aa17.32■□□□□ 0.36
HMGCLL1-209ENST00000515546 SYNRGQ9UMZ2 1314 aa17.32■□□□□ 0.36
HMGCLL1-209ENST00000515546 MCM3APO60318 1980 aa17.32■□□□□ 0.36
HMGCLL1-209ENST00000515546 ASB14A6NK59 587 aa17.32■□□□□ 0.36
HMGCLL1-209ENST00000515546 ADCY6O43306 1168 aa17.32■□□□□ 0.36
HMGCLL1-209ENST00000515546 SNX17Q15036 470 aa17.32■□□□□ 0.36
HMGCLL1-209ENST00000515546 HABP4Q5JVS0 413 aaKnown RBP17.32■□□□□ 0.36
HMGCLL1-209ENST00000515546 NSMFQ6X4W1 530 aa17.32■□□□□ 0.36
HMGCLL1-209ENST00000515546 SLC30A10Q6XR72 485 aa17.32■□□□□ 0.36
HMGCLL1-209ENST00000515546 SENP6Q9GZR1 1112 aaPredicted RBP17.32■□□□□ 0.36
HMGCLL1-209ENST00000515546 MAF1Q9H063 256 aa17.32■□□□□ 0.36
HMGCLL1-209ENST00000515546 SENP2Q9HC62 589 aa17.32■□□□□ 0.36
HMGCLL1-209ENST00000515546 PHF24Q9UPV7 400 aa17.32■□□□□ 0.36
HMGCLL1-209ENST00000515546 LOC102724159A0A0B4J2E5 919 aa17.31■□□□□ 0.36
HMGCLL1-209ENST00000515546 PALM3A6NDB9 673 aaPredicted RBP17.31■□□□□ 0.36
HMGCLL1-209ENST00000515546 IFIT3O14879 490 aaKnown RBP17.31■□□□□ 0.36
HMGCLL1-209ENST00000515546 SLC27A2O14975 620 aa17.31■□□□□ 0.36
HMGCLL1-209ENST00000515546 DUSP11O75319 330 aaKnown RBP17.31■□□□□ 0.36
HMGCLL1-209ENST00000515546 CDC45O75419 566 aa17.31■□□□□ 0.36
HMGCLL1-209ENST00000515546 BAATQ14032 418 aaPredicted RBP17.31■□□□□ 0.36
HMGCLL1-209ENST00000515546 GRM4Q14833 912 aa17.31■□□□□ 0.36
HMGCLL1-209ENST00000515546 SART3Q15020 963 aaKnown RBP17.31■□□□□ 0.36
HMGCLL1-209ENST00000515546 NECTIN1Q15223 517 aa17.31■□□□□ 0.36
HMGCLL1-209ENST00000515546 PWP2Q15269 919 aaKnown RBP17.31■□□□□ 0.36
HMGCLL1-209ENST00000515546 CCDC144BQ3MJ40 725 aa17.31■□□□□ 0.36
HMGCLL1-209ENST00000515546 CHRDL2Q6WN34 429 aa17.31■□□□□ 0.36
HMGCLL1-209ENST00000515546 RNF180Q86T96 592 aa17.31■□□□□ 0.36
HMGCLL1-209ENST00000515546 STAG2Q8N3U4 1231 aa17.31■□□□□ 0.36
HMGCLL1-209ENST00000515546 MTA3Q9BTC8 594 aa17.31■□□□□ 0.36
HMGCLL1-209ENST00000515546 JMJD4Q9H9V9 463 aa17.31■□□□□ 0.36
HMGCLL1-209ENST00000515546 ANO2Q9NQ90 1003 aa17.31■□□□□ 0.36
HMGCLL1-209ENST00000515546 MAD2L2Q9UI95 211 aa17.31■□□□□ 0.36
HMGCLL1-209ENST00000515546 PGK1P00558 417 aa17.3■□□□□ 0.36
HMGCLL1-209ENST00000515546 CST5P28325 142 aaPredicted RBP17.3■□□□□ 0.36
HMGCLL1-209ENST00000515546 NKX3-2P78367 333 aa17.3■□□□□ 0.36
HMGCLL1-209ENST00000515546 TROAPQ12815 778 aa17.3■□□□□ 0.36
HMGCLL1-209ENST00000515546 WTAPQ15007 396 aa17.3■□□□□ 0.36
HMGCLL1-209ENST00000515546 QRICH1Q2TAL8 776 aa17.3■□□□□ 0.36
HMGCLL1-209ENST00000515546 CREB3L3Q68CJ9 461 aa17.3■□□□□ 0.36
HMGCLL1-209ENST00000515546 RGS22Q8NE09 1264 aa17.3■□□□□ 0.36
HMGCLL1-209ENST00000515546 IGDCC4Q8TDY8 1250 aa17.3■□□□□ 0.36
HMGCLL1-209ENST00000515546 MTMR8Q96EF0 704 aa17.3■□□□□ 0.36
HMGCLL1-209ENST00000515546 PURBQ96QR8 312 aaKnown RBP17.3■□□□□ 0.36
HMGCLL1-209ENST00000515546 UPF3AQ9H1J1 476 aaKnown RBP17.3■□□□□ 0.36
HMGCLL1-209ENST00000515546 ABCB11O95342 1321 aa17.29■□□□□ 0.36
HMGCLL1-209ENST00000515546 ERICH2A1L162 156 aa17.29■□□□□ 0.36
HMGCLL1-209ENST00000515546 KLRF2D3W0D1 207 aa17.29■□□□□ 0.36
HMGCLL1-209ENST00000515546 ADCYAP1R1P41586 468 aa17.29■□□□□ 0.36
HMGCLL1-209ENST00000515546 ALDH5A1P51649 535 aaPredicted RBP17.29■□□□□ 0.36
HMGCLL1-209ENST00000515546 COL9A3Q14050 684 aaPredicted RBP17.29■□□□□ 0.36
HMGCLL1-209ENST00000515546 SLC35G1Q2M3R5 365 aa17.29■□□□□ 0.36
HMGCLL1-209ENST00000515546 TMEM67Q5HYA8 995 aa17.29■□□□□ 0.36
HMGCLL1-209ENST00000515546 C1orf53Q5VUE5 145 aa17.29■□□□□ 0.36
HMGCLL1-209ENST00000515546 CCSAPQ6IQ19 270 aaPredicted RBP17.29■□□□□ 0.36
HMGCLL1-209ENST00000515546 RNF207Q6ZRF8 634 aa17.29■□□□□ 0.36
HMGCLL1-209ENST00000515546 CHST3Q7LGC8 479 aa17.29■□□□□ 0.36
HMGCLL1-209ENST00000515546 KLHDC9Q8NEP7 349 aa17.29■□□□□ 0.36
HMGCLL1-209ENST00000515546 LY9Q9HBG7 655 aa17.29■□□□□ 0.36
HMGCLL1-209ENST00000515546 PPP4R2Q9NY27 417 aa17.29■□□□□ 0.36
HMGCLL1-209ENST00000515546 ADD3Q9UEY8 706 aaKnown RBP17.29■□□□□ 0.36
HMGCLL1-209ENST00000515546 DDX49Q9Y6V7 483 aaKnown RBP17.29■□□□□ 0.36
HMGCLL1-209ENST00000515546 PTPDC1A2A3K4 754 aa17.28■□□□□ 0.36
HMGCLL1-209ENST00000515546 EDNRBP24530 442 aa17.28■□□□□ 0.36
HMGCLL1-209ENST00000515546 ATN1P54259 1190 aaPredicted RBP17.28■□□□□ 0.36
HMGCLL1-209ENST00000515546 GJA9P57773 515 aa17.28■□□□□ 0.36
HMGCLL1-209ENST00000515546 RPS6P62753 249 aaKnown RBP17.28■□□□□ 0.36
HMGCLL1-209ENST00000515546 USH1GQ495M9 461 aa17.28■□□□□ 0.36
HMGCLL1-209ENST00000515546 CASC1Q6TDU7 716 aa17.28■□□□□ 0.36
HMGCLL1-209ENST00000515546 TSEN34Q9BSV6 310 aaKnown RBP17.28■□□□□ 0.36
HMGCLL1-209ENST00000515546 VTA1Q9NP79 307 aa17.28■□□□□ 0.36
HMGCLL1-209ENST00000515546 ZMYND8Q9ULU4 1186 aaPredicted RBP17.28■□□□□ 0.36
HMGCLL1-209ENST00000515546 LAMA3Q16787 3333 aa17.27■□□□□ 0.36
HMGCLL1-209ENST00000515546 MYADML2A6NDP7 307 aa17.27■□□□□ 0.36
HMGCLL1-209ENST00000515546 SH2B2O14492 632 aaPredicted RBP17.27■□□□□ 0.36
HMGCLL1-209ENST00000515546 CTAGE5O15320 804 aa17.27■□□□□ 0.36
HMGCLL1-209ENST00000515546 PRC1O43663 620 aa17.27■□□□□ 0.36
HMGCLL1-209ENST00000515546 PPP1R11O60927 126 aaPredicted RBP17.27■□□□□ 0.36
HMGCLL1-209ENST00000515546 MYCNP04198 464 aaPredicted RBP17.27■□□□□ 0.36
HMGCLL1-209ENST00000515546 CALML3P27482 149 aa17.27■□□□□ 0.36
HMGCLL1-209ENST00000515546 MCM5P33992 734 aa17.27■□□□□ 0.36
HMGCLL1-209ENST00000515546 RTP1P59025 263 aa17.27■□□□□ 0.36
HMGCLL1-209ENST00000515546 GHRHRQ02643 423 aa17.27■□□□□ 0.36
HMGCLL1-209ENST00000515546 TAPT1Q6NXT6 567 aa17.27■□□□□ 0.36
HMGCLL1-209ENST00000515546 SLC39A5Q6ZMH5 540 aa17.27■□□□□ 0.36
HMGCLL1-209ENST00000515546 FBXO11Q86XK2 927 aa17.27■□□□□ 0.36
HMGCLL1-209ENST00000515546 FBXO16Q8IX29 292 aaPredicted RBP17.27■□□□□ 0.36
HMGCLL1-209ENST00000515546 MAP3K14Q99558 947 aa17.27■□□□□ 0.36
HMGCLL1-209ENST00000515546 GDF15Q99988 308 aa17.27■□□□□ 0.36
HMGCLL1-209ENST00000515546 RBM27Q9P2N5 1060 aaKnown RBP17.27■□□□□ 0.36
HMGCLL1-209ENST00000515546 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms