RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 PALM3A6NDB9 673 aaPredicted RBP14.9□□□□□ -0.02
CLCN3-210ENST00000515420 KLRF2D3W0D1 207 aa14.9□□□□□ -0.02
CLCN3-210ENST00000515420 EPB41L2O43491 1005 aaKnown RBP14.9□□□□□ -0.02
CLCN3-210ENST00000515420 SNAI1O95863 264 aaPredicted RBP14.9□□□□□ -0.02
CLCN3-210ENST00000515420 ZNF865P0CJ78 1059 aaPredicted RBP14.9□□□□□ -0.02
CLCN3-210ENST00000515420 COL6A1P12109 1028 aa14.9□□□□□ -0.02
CLCN3-210ENST00000515420 AKR1A1P14550 325 aa14.9□□□□□ -0.02
CLCN3-210ENST00000515420 TROAPQ12815 778 aa14.9□□□□□ -0.02
CLCN3-210ENST00000515420 KRT32Q14532 448 aa14.9□□□□□ -0.02
CLCN3-210ENST00000515420 GRM4Q14833 912 aa14.9□□□□□ -0.02
CLCN3-210ENST00000515420 CDC37Q16543 378 aaPredicted RBP14.9□□□□□ -0.02
CLCN3-210ENST00000515420 ARMCX2Q7L311 632 aa14.9□□□□□ -0.02
CLCN3-210ENST00000515420 ARRDC4Q8NCT1 418 aa14.9□□□□□ -0.02
CLCN3-210ENST00000515420 RGS22Q8NE09 1264 aa14.9□□□□□ -0.02
CLCN3-210ENST00000515420 DIS3LQ8TF46 1054 aaKnown RBP14.9□□□□□ -0.02
CLCN3-210ENST00000515420 UBA5Q9GZZ9 404 aa14.9□□□□□ -0.02
CLCN3-210ENST00000515420 C11orf49Q9H6J7 331 aa14.9□□□□□ -0.02
CLCN3-210ENST00000515420 DNM1LO00429 736 aa14.89□□□□□ -0.03
CLCN3-210ENST00000515420 PRC1O43663 620 aa14.89□□□□□ -0.03
CLCN3-210ENST00000515420 DDAH1O94760 285 aa14.89□□□□□ -0.03
CLCN3-210ENST00000515420 REC8O95072 547 aa14.89□□□□□ -0.03
CLCN3-210ENST00000515420 LIFRP42702 1097 aa14.89□□□□□ -0.03
CLCN3-210ENST00000515420 CNTN2Q02246 1040 aa14.89□□□□□ -0.03
CLCN3-210ENST00000515420 PRAMEF19Q5SWL8 479 aa14.89□□□□□ -0.03
CLCN3-210ENST00000515420 NSMFQ6X4W1 530 aa14.89□□□□□ -0.03
CLCN3-210ENST00000515420 CATIPQ7Z7H3 387 aa14.89□□□□□ -0.03
CLCN3-210ENST00000515420 STAG2Q8N3U4 1231 aa14.89□□□□□ -0.03
CLCN3-210ENST00000515420 CLEC4DQ8WXI8 215 aa14.89□□□□□ -0.03
CLCN3-210ENST00000515420 MTMR8Q96EF0 704 aa14.89□□□□□ -0.03
CLCN3-210ENST00000515420 JMJD4Q9H9V9 463 aa14.89□□□□□ -0.03
CLCN3-210ENST00000515420 LY9Q9HBG7 655 aa14.89□□□□□ -0.03
CLCN3-210ENST00000515420 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.89□□□□□ -0.03
CLCN3-210ENST00000515420 ADD3Q9UEY8 706 aaKnown RBP14.89□□□□□ -0.03
CLCN3-210ENST00000515420 ABCB11O95342 1321 aa14.89□□□□□ -0.03
CLCN3-210ENST00000515420 NFIBO00712 420 aa14.88□□□□□ -0.03
CLCN3-210ENST00000515420 SH2B2O14492 632 aaPredicted RBP14.88□□□□□ -0.03
CLCN3-210ENST00000515420 RARBP10826 455 aa14.88□□□□□ -0.03
CLCN3-210ENST00000515420 TRAF1Q13077 416 aa14.88□□□□□ -0.03
CLCN3-210ENST00000515420 QRICH1Q2TAL8 776 aa14.88□□□□□ -0.03
CLCN3-210ENST00000515420 CHST3Q7LGC8 479 aa14.88□□□□□ -0.03
CLCN3-210ENST00000515420 CCDC144CPQ8IYA2 1237 aa14.88□□□□□ -0.03
CLCN3-210ENST00000515420 MORC4Q8TE76 937 aa14.88□□□□□ -0.03
CLCN3-210ENST00000515420 CPVLQ9H3G5 476 aa14.88□□□□□ -0.03
CLCN3-210ENST00000515420 RIOX1Q9H6W3 641 aa14.88□□□□□ -0.03
CLCN3-210ENST00000515420 SENP2Q9HC62 589 aa14.88□□□□□ -0.03
CLCN3-210ENST00000515420 FAM184BQ9ULE4 1060 aa14.88□□□□□ -0.03
CLCN3-210ENST00000515420 NR2E3Q9Y5X4 410 aa14.88□□□□□ -0.03
CLCN3-210ENST00000515420 PTPDC1A2A3K4 754 aa14.87□□□□□ -0.03
CLCN3-210ENST00000515420 SOWAHBA6NEL2 793 aa14.87□□□□□ -0.03
CLCN3-210ENST00000515420 KBTBD13C9JR72 458 aa14.87□□□□□ -0.03
CLCN3-210ENST00000515420 ZBTB5O15062 677 aa14.87□□□□□ -0.03
CLCN3-210ENST00000515420 DHX16O60231 1041 aaKnown RBP14.87□□□□□ -0.03
CLCN3-210ENST00000515420 HMGB1P09429 215 aaKnown RBP14.87□□□□□ -0.03
CLCN3-210ENST00000515420 CALM1P0DP23 149 aa14.87□□□□□ -0.03
CLCN3-210ENST00000515420 CALM2P0DP24 149 aa14.87□□□□□ -0.03
CLCN3-210ENST00000515420 CALM3P0DP25 149 aa14.87□□□□□ -0.03
CLCN3-210ENST00000515420 TAL1P17542 331 aaPredicted RBP14.87□□□□□ -0.03
CLCN3-210ENST00000515420 SMARCA1P28370 1054 aa14.87□□□□□ -0.03
CLCN3-210ENST00000515420 KIF5BP33176 963 aa14.87□□□□□ -0.03
CLCN3-210ENST00000515420 ACVR2BQ13705 512 aa14.87□□□□□ -0.03
CLCN3-210ENST00000515420 BAATQ14032 418 aaPredicted RBP14.87□□□□□ -0.03
CLCN3-210ENST00000515420 RNF207Q6ZRF8 634 aa14.87□□□□□ -0.03
CLCN3-210ENST00000515420 SGMS1Q86VZ5 419 aa14.87□□□□□ -0.03
CLCN3-210ENST00000515420 FBXO11Q86XK2 927 aa14.87□□□□□ -0.03
CLCN3-210ENST00000515420 ZNF654Q8IZM8 581 aa14.87□□□□□ -0.03
CLCN3-210ENST00000515420 DNERQ8NFT8 737 aa14.87□□□□□ -0.03
CLCN3-210ENST00000515420 DPF3Q92784 378 aa14.87□□□□□ -0.03
CLCN3-210ENST00000515420 KCNB2Q92953 911 aa14.87□□□□□ -0.03
CLCN3-210ENST00000515420 NEK1Q96PY6 1258 aa14.87□□□□□ -0.03
CLCN3-210ENST00000515420 AMNQ9BXJ7 453 aa14.87□□□□□ -0.03
CLCN3-210ENST00000515420 MRPL11Q9Y3B7 192 aaKnown RBP14.87□□□□□ -0.03
CLCN3-210ENST00000515420 BAZ2BQ9UIF8 2168 aaKnown RBP14.86□□□□□ -0.03
CLCN3-210ENST00000515420 CCDC69A6NI79 296 aa14.86□□□□□ -0.03
CLCN3-210ENST00000515420 EVI5O60447 810 aa14.86□□□□□ -0.03
CLCN3-210ENST00000515420 DUSP11O75319 330 aaKnown RBP14.86□□□□□ -0.03
CLCN3-210ENST00000515420 RPS6P62753 249 aaKnown RBP14.86□□□□□ -0.03
CLCN3-210ENST00000515420 USH1GQ495M9 461 aa14.86□□□□□ -0.03
CLCN3-210ENST00000515420 MCF2L2Q86YR7 1114 aa14.86□□□□□ -0.03
CLCN3-210ENST00000515420 SAMD3Q8N6K7 520 aa14.86□□□□□ -0.03
CLCN3-210ENST00000515420 CTCFLQ8NI51 663 aaPredicted RBP14.86□□□□□ -0.03
CLCN3-210ENST00000515420 MPHOSPH6Q99547 160 aaKnown RBP14.86□□□□□ -0.03
CLCN3-210ENST00000515420 KATNBL1Q9H079 304 aa14.86□□□□□ -0.03
CLCN3-210ENST00000515420 XPNPEP3Q9NQH7 507 aa14.86□□□□□ -0.03
CLCN3-210ENST00000515420 MAP3K20Q9NYL2 800 aaKnown RBP14.86□□□□□ -0.03
CLCN3-210ENST00000515420 ZHX1Q9UKY1 873 aaPredicted RBP14.86□□□□□ -0.03
CLCN3-210ENST00000515420 ASTN1O14525 1302 aa14.86□□□□□ -0.03
CLCN3-210ENST00000515420 CEP290O15078 2479 aa14.86□□□□□ -0.03
CLCN3-210ENST00000515420 B4DLN1 442 aa14.85□□□□□ -0.03
CLCN3-210ENST00000515420 HSPA4P34932 840 aa14.85□□□□□ -0.03
CLCN3-210ENST00000515420 GNAQP50148 359 aa14.85□□□□□ -0.03
CLCN3-210ENST00000515420 ALDH5A1P51649 535 aaPredicted RBP14.85□□□□□ -0.03
CLCN3-210ENST00000515420 MRPL12P52815 198 aaKnown RBP14.85□□□□□ -0.03
CLCN3-210ENST00000515420 EXOSC10Q01780 885 aaKnown RBP14.85□□□□□ -0.03
CLCN3-210ENST00000515420 GHRHRQ02643 423 aa14.85□□□□□ -0.03
CLCN3-210ENST00000515420 LRRC41Q15345 812 aa14.85□□□□□ -0.03
CLCN3-210ENST00000515420 SLC30A10Q6XR72 485 aa14.85□□□□□ -0.03
CLCN3-210ENST00000515420 NFXL1Q6ZNB6 911 aa14.85□□□□□ -0.03
CLCN3-210ENST00000515420 DHX32Q7L7V1 743 aaKnown RBP14.85□□□□□ -0.03
CLCN3-210ENST00000515420 RNF180Q86T96 592 aa14.85□□□□□ -0.03
CLCN3-210ENST00000515420 RASEFQ8IZ41 740 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms