RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 ABHD16BQ9H3Z7 469 aa17.24■□□□□ 0.35
SGCA-211ENST00000514934 KBTBD13C9JR72 458 aa17.23■□□□□ 0.35
SGCA-211ENST00000514934 SGSM2O43147 1006 aa17.23■□□□□ 0.35
SGCA-211ENST00000514934 DUSP11O75319 330 aaKnown RBP17.23■□□□□ 0.35
SGCA-211ENST00000514934 PTGS1P23219 599 aa17.23■□□□□ 0.35
SGCA-211ENST00000514934 CST5P28325 142 aaPredicted RBP17.23■□□□□ 0.35
SGCA-211ENST00000514934 IKQ13123 557 aaPredicted RBP17.23■□□□□ 0.35
SGCA-211ENST00000514934 CCDC144BQ3MJ40 725 aa17.23■□□□□ 0.35
SGCA-211ENST00000514934 CYB5R4Q7L1T6 521 aa17.23■□□□□ 0.35
SGCA-211ENST00000514934 ZSCAN10Q96SZ4 725 aaPredicted RBP17.23■□□□□ 0.35
SGCA-211ENST00000514934 CCPG1Q9ULG6 757 aa17.23■□□□□ 0.35
SGCA-211ENST00000514934 CNPY2Q9Y2B0 182 aa17.23■□□□□ 0.35
SGCA-211ENST00000514934 CHD9Q3L8U1 2897 aa17.22■□□□□ 0.35
SGCA-211ENST00000514934 WDR19Q8NEZ3 1342 aa17.22■□□□□ 0.35
SGCA-211ENST00000514934 EYSQ5T1H1 3165 aa17.22■□□□□ 0.35
SGCA-211ENST00000514934 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.22■□□□□ 0.35
SGCA-211ENST00000514934 A0A1W2PQ45 241 aaPredicted RBP17.22■□□□□ 0.35
SGCA-211ENST00000514934 A0A1W2PQY0 241 aa17.22■□□□□ 0.35
SGCA-211ENST00000514934 POTEB2H3BUK9 544 aa17.22■□□□□ 0.35
SGCA-211ENST00000514934 CYP21A2P08686 494 aa17.22■□□□□ 0.35
SGCA-211ENST00000514934 IMMTQ16891 758 aaKnown RBP17.22■□□□□ 0.35
SGCA-211ENST00000514934 SLC35G1Q2M3R5 365 aa17.22■□□□□ 0.35
SGCA-211ENST00000514934 TRIM60Q495X7 471 aa17.22■□□□□ 0.35
SGCA-211ENST00000514934 TMEM63BQ5T3F8 832 aa17.22■□□□□ 0.35
SGCA-211ENST00000514934 TAPT1Q6NXT6 567 aa17.22■□□□□ 0.35
SGCA-211ENST00000514934 STOX1Q6ZVD7 989 aa17.22■□□□□ 0.35
SGCA-211ENST00000514934 PNMA1Q8ND90 353 aa17.22■□□□□ 0.35
SGCA-211ENST00000514934 FERMT2Q96AC1 680 aa17.22■□□□□ 0.35
SGCA-211ENST00000514934 ZHX1Q9UKY1 873 aaPredicted RBP17.22■□□□□ 0.35
SGCA-211ENST00000514934 CTDP1Q9Y5B0 961 aaPredicted RBP17.22■□□□□ 0.35
SGCA-211ENST00000514934 TNKSO95271 1327 aa17.21■□□□□ 0.35
SGCA-211ENST00000514934 GOLGA8HP0CJ92 632 aa17.21■□□□□ 0.35
SGCA-211ENST00000514934 GJA9P57773 515 aa17.21■□□□□ 0.35
SGCA-211ENST00000514934 COL9A3Q14050 684 aaPredicted RBP17.21■□□□□ 0.35
SGCA-211ENST00000514934 SLC30A10Q6XR72 485 aa17.21■□□□□ 0.35
SGCA-211ENST00000514934 SH3RF1Q7Z6J0 888 aa17.21■□□□□ 0.35
SGCA-211ENST00000514934 SKAP1Q86WV1 359 aa17.21■□□□□ 0.35
SGCA-211ENST00000514934 TSEN34Q9BSV6 310 aaKnown RBP17.21■□□□□ 0.35
SGCA-211ENST00000514934 PDLIM7Q9NR12 457 aa17.21■□□□□ 0.35
SGCA-211ENST00000514934 CTNNA3Q9UI47 895 aa17.21■□□□□ 0.35
SGCA-211ENST00000514934 FAM184BQ9ULE4 1060 aa17.21■□□□□ 0.35
SGCA-211ENST00000514934 ISY1Q9ULR0 285 aaKnown RBP17.21■□□□□ 0.35
SGCA-211ENST00000514934 GNEQ9Y223 722 aaKnown RBP17.21■□□□□ 0.35
SGCA-211ENST00000514934 TRIM43BA6NCK2 446 aa17.2■□□□□ 0.34
SGCA-211ENST00000514934 ITGB8P26012 769 aa17.2■□□□□ 0.34
SGCA-211ENST00000514934 ACLYP53396 1101 aa17.2■□□□□ 0.34
SGCA-211ENST00000514934 BAATQ14032 418 aaPredicted RBP17.2■□□□□ 0.34
SGCA-211ENST00000514934 TRIM43Q96BQ3 446 aaPredicted RBP17.2■□□□□ 0.34
SGCA-211ENST00000514934 LRCH3Q96II8 777 aa17.2■□□□□ 0.34
SGCA-211ENST00000514934 SENP2Q9HC62 589 aa17.2■□□□□ 0.34
SGCA-211ENST00000514934 MDM2Q00987 491 aaPredicted RBP17.19■□□□□ 0.34
SGCA-211ENST00000514934 GPATCH4Q5T3I0 446 aaKnown RBP17.19■□□□□ 0.34
SGCA-211ENST00000514934 RNF180Q86T96 592 aa17.19■□□□□ 0.34
SGCA-211ENST00000514934 IQCA1Q86XH1 822 aa17.19■□□□□ 0.34
SGCA-211ENST00000514934 KRT23Q9C075 422 aa17.19■□□□□ 0.34
SGCA-211ENST00000514934 UBA5Q9GZZ9 404 aa17.19■□□□□ 0.34
SGCA-211ENST00000514934 PDGFCQ9NRA1 345 aa17.19■□□□□ 0.34
SGCA-211ENST00000514934 ATP11BQ9Y2G3 1177 aa17.19■□□□□ 0.34
SGCA-211ENST00000514934 GBF1Q92538 1859 aa17.18■□□□□ 0.34
SGCA-211ENST00000514934 DOCK5Q9H7D0 1870 aa17.18■□□□□ 0.34
SGCA-211ENST00000514934 EDNRBP24530 442 aa17.18■□□□□ 0.34
SGCA-211ENST00000514934 ANTXR2P58335 489 aa17.18■□□□□ 0.34
SGCA-211ENST00000514934 TLE2Q04725 743 aa17.18■□□□□ 0.34
SGCA-211ENST00000514934 KCNA10Q16322 511 aa17.18■□□□□ 0.34
SGCA-211ENST00000514934 LRIT3Q3SXY7 679 aa17.18■□□□□ 0.34
SGCA-211ENST00000514934 NSMFQ6X4W1 530 aa17.18■□□□□ 0.34
SGCA-211ENST00000514934 TDHQ8IZJ6 230 aa17.18■□□□□ 0.34
SGCA-211ENST00000514934 MAP4K1Q92918 833 aa17.18■□□□□ 0.34
SGCA-211ENST00000514934 MTMR8Q96EF0 704 aa17.18■□□□□ 0.34
SGCA-211ENST00000514934 CNNM2Q9H8M5 875 aa17.18■□□□□ 0.34
SGCA-211ENST00000514934 A0A0C4DFX4 3053 aa17.17■□□□□ 0.34
SGCA-211ENST00000514934 RBM47A0AV96 593 aaKnown RBP17.17■□□□□ 0.34
SGCA-211ENST00000514934 ASB14A6NK59 587 aa17.17■□□□□ 0.34
SGCA-211ENST00000514934 OPLAHO14841 1288 aa17.17■□□□□ 0.34
SGCA-211ENST00000514934 SMPD1P17405 629 aa17.17■□□□□ 0.34
SGCA-211ENST00000514934 CDK7P50613 346 aa17.17■□□□□ 0.34
SGCA-211ENST00000514934 ALDH5A1P51649 535 aaPredicted RBP17.17■□□□□ 0.34
SGCA-211ENST00000514934 ASPRV1Q53RT3 343 aa17.17■□□□□ 0.34
SGCA-211ENST00000514934 CCDC178Q5BJE1 867 aa17.17■□□□□ 0.34
SGCA-211ENST00000514934 ANKRD33Q7Z3H0 272 aa17.17■□□□□ 0.34
SGCA-211ENST00000514934 FBXO16Q8IX29 292 aaPredicted RBP17.17■□□□□ 0.34
SGCA-211ENST00000514934 ADGRF4Q8IZF3 695 aa17.17■□□□□ 0.34
SGCA-211ENST00000514934 STAG2Q8N3U4 1231 aa17.17■□□□□ 0.34
SGCA-211ENST00000514934 JMJD4Q9H9V9 463 aa17.17■□□□□ 0.34
SGCA-211ENST00000514934 CHD7Q9P2D1 2997 aa17.17■□□□□ 0.34
SGCA-211ENST00000514934 PRUNE2Q8WUY3 3088 aa17.17■□□□□ 0.34
SGCA-211ENST00000514934 SCN5AQ14524 2016 aa17.16■□□□□ 0.34
SGCA-211ENST00000514934 LOC102724159A0A0B4J2E5 919 aa17.16■□□□□ 0.34
SGCA-211ENST00000514934 MOXD2PA6NHM9 499 aa17.16■□□□□ 0.34
SGCA-211ENST00000514934 KIAA0355O15063 1070 aa17.16■□□□□ 0.34
SGCA-211ENST00000514934 PPP1R11O60927 126 aaPredicted RBP17.16■□□□□ 0.34
SGCA-211ENST00000514934 MYCNP04198 464 aaPredicted RBP17.16■□□□□ 0.34
SGCA-211ENST00000514934 RPS6P62753 249 aaKnown RBP17.16■□□□□ 0.34
SGCA-211ENST00000514934 PWP2Q15269 919 aaKnown RBP17.16■□□□□ 0.34
SGCA-211ENST00000514934 CDC37Q16543 378 aaPredicted RBP17.16■□□□□ 0.34
SGCA-211ENST00000514934 MB21D2Q8IYB1 491 aaPredicted RBP17.16■□□□□ 0.34
SGCA-211ENST00000514934 TBC1D5Q92609 795 aa17.16■□□□□ 0.34
SGCA-211ENST00000514934 LSG1Q9H089 658 aaKnown RBP17.16■□□□□ 0.34
SGCA-211ENST00000514934 COL20A1Q9P218 1284 aa17.16■□□□□ 0.34
SGCA-211ENST00000514934 MAD2L2Q9UI95 211 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms