RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 KIF5BP33176 963 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 RGS19P49795 217 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 RCAN1P53805 252 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 PWP2Q15269 919 aaKnown RBP9.55□□□□□ -0.88
NEDD4-210ENST00000513957 TMEM67Q5HYA8 995 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 DPP9Q86TI2 863 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 SGMS1Q86VZ5 419 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 FBXL16Q8N461 479 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 EFCAB3Q8N7B9 438 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 IGDCC4Q8TDY8 1250 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 NEK1Q96PY6 1258 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 MMP19Q99542 508 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 ACAD9Q9H845 621 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 NRBP1Q9UHY1 535 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 ZNF536O15090 1300 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 RPTORQ8N122 1335 aa9.55□□□□□ -0.88
NEDD4-210ENST00000513957 LRRC37A2A6NM11 1700 aa9.54□□□□□ -0.88
NEDD4-210ENST00000513957 MCM3APO60318 1980 aa9.54□□□□□ -0.88
NEDD4-210ENST00000513957 SH2B2O14492 632 aaPredicted RBP9.54□□□□□ -0.88
NEDD4-210ENST00000513957 PRC1O43663 620 aa9.54□□□□□ -0.88
NEDD4-210ENST00000513957 MSCO60682 206 aa9.54□□□□□ -0.88
NEDD4-210ENST00000513957 GJB1P08034 283 aa9.54□□□□□ -0.88
NEDD4-210ENST00000513957 CYP2B6P20813 491 aa9.54□□□□□ -0.88
NEDD4-210ENST00000513957 SMARCA1P28370 1054 aa9.54□□□□□ -0.88
NEDD4-210ENST00000513957 ANTXR2P58335 489 aa9.54□□□□□ -0.88
NEDD4-210ENST00000513957 TROAPQ12815 778 aa9.54□□□□□ -0.88
NEDD4-210ENST00000513957 MAP3K21Q5TCX8 1036 aa9.54□□□□□ -0.88
NEDD4-210ENST00000513957 MFSD14CQ5VZR4 134 aa9.54□□□□□ -0.88
NEDD4-210ENST00000513957 DHX32Q7L7V1 743 aaKnown RBP9.54□□□□□ -0.88
NEDD4-210ENST00000513957 CPXCR1Q8N123 301 aa9.54□□□□□ -0.88
NEDD4-210ENST00000513957 SH3TC2Q8TF17 1288 aa9.54□□□□□ -0.88
NEDD4-210ENST00000513957 TRIB2Q92519 343 aa9.54□□□□□ -0.88
NEDD4-210ENST00000513957 LZTS2Q9BRK4 669 aa9.54□□□□□ -0.88
NEDD4-210ENST00000513957 LY9Q9HBG7 655 aa9.54□□□□□ -0.88
NEDD4-210ENST00000513957 RAVER2Q9HCJ3 691 aaKnown RBP9.54□□□□□ -0.88
NEDD4-210ENST00000513957 BIN2Q9UBW5 565 aaPredicted RBP9.54□□□□□ -0.88
NEDD4-210ENST00000513957 TAF6LQ9Y6J9 622 aa9.54□□□□□ -0.88
NEDD4-210ENST00000513957 FRMPD2Q68DX3 1309 aaPredicted RBP9.54□□□□□ -0.88
NEDD4-210ENST00000513957 DNAJC25-GNG10A0A024R161 153 aa9.53□□□□□ -0.88
NEDD4-210ENST00000513957 PALM3A6NDB9 673 aaPredicted RBP9.53□□□□□ -0.88
NEDD4-210ENST00000513957 CCDC69A6NI79 296 aa9.53□□□□□ -0.88
NEDD4-210ENST00000513957 PEX10O60683 326 aa9.53□□□□□ -0.88
NEDD4-210ENST00000513957 IGHA2P01877 340 aa9.53□□□□□ -0.88
NEDD4-210ENST00000513957 CCL5P13501 91 aa9.53□□□□□ -0.88
NEDD4-210ENST00000513957 GNAQP50148 359 aa9.53□□□□□ -0.88
NEDD4-210ENST00000513957 ANAPC15P60006 121 aa9.53□□□□□ -0.88
NEDD4-210ENST00000513957 GRM4Q14833 912 aa9.53□□□□□ -0.88
NEDD4-210ENST00000513957 PPP2R5BQ15173 497 aa9.53□□□□□ -0.88
NEDD4-210ENST00000513957 ZNF654Q8IZM8 581 aa9.53□□□□□ -0.88
NEDD4-210ENST00000513957 SAMD3Q8N6K7 520 aa9.53□□□□□ -0.88
NEDD4-210ENST00000513957 CTCFLQ8NI51 663 aaPredicted RBP9.53□□□□□ -0.88
NEDD4-210ENST00000513957 HMX1Q9NP08 348 aaPredicted RBP9.53□□□□□ -0.88
NEDD4-210ENST00000513957 GPCPD1Q9NPB8 672 aa9.53□□□□□ -0.88
NEDD4-210ENST00000513957 PAK6Q9NQU5 681 aaPredicted RBP9.53□□□□□ -0.88
NEDD4-210ENST00000513957 RNF146Q9NTX7 359 aa9.53□□□□□ -0.88
NEDD4-210ENST00000513957 MAD2L2Q9UI95 211 aa9.53□□□□□ -0.88
NEDD4-210ENST00000513957 CCPG1Q9ULG6 757 aa9.53□□□□□ -0.88
NEDD4-210ENST00000513957 MTMR7Q9Y216 660 aa9.53□□□□□ -0.88
NEDD4-210ENST00000513957 ABCB11O95342 1321 aa9.53□□□□□ -0.88
NEDD4-210ENST00000513957 SYNGAP1Q96PV0 1343 aa9.53□□□□□ -0.88
NEDD4-210ENST00000513957 POTEMA6NI47 508 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 KLRF2D3W0D1 207 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 ELNP15502 786 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 SLC16A2P36021 539 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 GJA8P48165 433 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 EXOSC10Q01780 885 aaKnown RBP9.52□□□□□ -0.89
NEDD4-210ENST00000513957 CDC37Q16543 378 aaPredicted RBP9.52□□□□□ -0.89
NEDD4-210ENST00000513957 ZNF792Q3KQV3 632 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 TTBK2Q6IQ55 1244 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 BLOC1S2Q6QNY1 142 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 MAMDC4Q6UXC1 1216 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 SYNE3Q6ZMZ3 975 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 RASGRP2Q7LDG7 609 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 TEX2Q8IWB9 1127 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 PARP9Q8IXQ6 854 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 ANKRD35Q8N283 1001 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 ANKLE1Q8NAG6 615 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 MTMR8Q96EF0 704 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 DDX11Q96FC9 970 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 MAML3Q96JK9 1138 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 TRERF1Q96PN7 1200 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 SPZ1Q9BXG8 430 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 USP26Q9BXU7 913 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 TM6SF1Q9BZW5 370 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 RNF208Q9H0X6 261 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 RIOX1Q9H6W3 641 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 RBM28Q9NW13 759 aaKnown RBP9.52□□□□□ -0.89
NEDD4-210ENST00000513957 MAP3K20Q9NYL2 800 aaKnown RBP9.52□□□□□ -0.89
NEDD4-210ENST00000513957 RIPK3Q9Y572 518 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 SLC12A7Q9Y666 1083 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 KIAA1217Q5T5P2 1943 aa9.52□□□□□ -0.89
NEDD4-210ENST00000513957 NID2Q14112 1375 aa9.51□□□□□ -0.89
NEDD4-210ENST00000513957 ZBTB5O15062 677 aa9.51□□□□□ -0.89
NEDD4-210ENST00000513957 COBLO75128 1261 aa9.51□□□□□ -0.89
NEDD4-210ENST00000513957 ALAS1P13196 640 aa9.51□□□□□ -0.89
NEDD4-210ENST00000513957 CCDC174Q6PII3 467 aa9.51□□□□□ -0.89
NEDD4-210ENST00000513957 NFXL1Q6ZNB6 911 aa9.51□□□□□ -0.89
NEDD4-210ENST00000513957 CHST3Q7LGC8 479 aa9.51□□□□□ -0.89
NEDD4-210ENST00000513957 ADGRF4Q8IZF3 695 aa9.51□□□□□ -0.89
NEDD4-210ENST00000513957 NPLOC4Q8TAT6 608 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms