RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 IL23AQ9NPF7 189 aa11.49□□□□□ -0.57
TCOF1-212ENST00000513538 SYNPO2Q9UMS6 1093 aa11.49□□□□□ -0.57
TCOF1-212ENST00000513538 CTDP1Q9Y5B0 961 aaPredicted RBP11.49□□□□□ -0.57
TCOF1-212ENST00000513538 TCF20Q9UGU0 1960 aaKnown RBP11.48□□□□□ -0.57
TCOF1-212ENST00000513538 NMT2O60551 498 aa11.48□□□□□ -0.57
TCOF1-212ENST00000513538 APPP05067 770 aa11.48□□□□□ -0.57
TCOF1-212ENST00000513538 TSPY3P0CV98 308 aa11.48□□□□□ -0.57
TCOF1-212ENST00000513538 TSPY8P0CW00 308 aa11.48□□□□□ -0.57
TCOF1-212ENST00000513538 PSMC6P62333 389 aa11.48□□□□□ -0.57
TCOF1-212ENST00000513538 TFAP4Q01664 338 aa11.48□□□□□ -0.57
TCOF1-212ENST00000513538 FSCN1Q16658 493 aaKnown RBP11.48□□□□□ -0.57
TCOF1-212ENST00000513538 MUM1L1Q5H9M0 696 aa11.48□□□□□ -0.57
TCOF1-212ENST00000513538 AKNAD1Q5T1N1 836 aa11.48□□□□□ -0.57
TCOF1-212ENST00000513538 KCTD1Q719H9 257 aa11.48□□□□□ -0.57
TCOF1-212ENST00000513538 FBXO16Q8IX29 292 aaPredicted RBP11.48□□□□□ -0.57
TCOF1-212ENST00000513538 ZNF444Q8N0Y2 327 aaPredicted RBP11.48□□□□□ -0.57
TCOF1-212ENST00000513538 OTUD7AQ8TE49 926 aaPredicted RBP11.48□□□□□ -0.57
TCOF1-212ENST00000513538 GMCL1Q96IK5 515 aa11.48□□□□□ -0.57
TCOF1-212ENST00000513538 GAS2L1Q99501 681 aaPredicted RBP11.48□□□□□ -0.57
TCOF1-212ENST00000513538 NOC4LQ9BVI4 516 aaKnown RBP11.48□□□□□ -0.57
TCOF1-212ENST00000513538 TRPV6Q9H1D0 765 aa11.48□□□□□ -0.57
TCOF1-212ENST00000513538 DCTPP1Q9H773 170 aa11.48□□□□□ -0.57
TCOF1-212ENST00000513538 INCENPQ9NQS7 918 aa11.48□□□□□ -0.57
TCOF1-212ENST00000513538 RAPGEFL1Q9UHV5 662 aa11.48□□□□□ -0.57
TCOF1-212ENST00000513538 CHD7Q9P2D1 2997 aa11.48□□□□□ -0.57
TCOF1-212ENST00000513538 SCN10AQ9Y5Y9 1956 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 TANC1Q9C0D5 1861 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 PATL2C9JE40 543 aaKnown RBP11.47□□□□□ -0.57
TCOF1-212ENST00000513538 TNFRSF10AO00220 468 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 TLR3O15455 904 aaKnown RBP11.47□□□□□ -0.57
TCOF1-212ENST00000513538 B4GALT4O60513 344 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 MYOGP15173 224 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 GNAT2P19087 354 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 MCCP23508 829 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 STAT2P52630 851 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 RABGGTBP53611 331 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 CCL23P55773 120 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 PPARAQ07869 468 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 ITGA7Q13683 1181 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 CCDC85BQ15834 202 aaPredicted RBP11.47□□□□□ -0.57
TCOF1-212ENST00000513538 TAPT1Q6NXT6 567 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 CCDC174Q6PII3 467 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 NOL8Q76FK4 1167 aaKnown RBP11.47□□□□□ -0.57
TCOF1-212ENST00000513538 EEPD1Q7L9B9 569 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 OTOP2Q7RTS6 562 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 PI4K2BQ8TCG2 481 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 STAG1Q8WVM7 1258 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 TRERF1Q96PN7 1200 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 HIPK3Q9H422 1215 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 IL17RBQ9NRM6 502 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 RCAN3Q9UKA8 241 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.47□□□□□ -0.57
TCOF1-212ENST00000513538 NCOR1O75376 2440 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 PTPRSQ13332 1948 aa11.47□□□□□ -0.57
TCOF1-212ENST00000513538 DYNC1LI2O43237 492 aaPredicted RBP11.46□□□□□ -0.57
TCOF1-212ENST00000513538 ZFYP08048 801 aaPredicted RBP11.46□□□□□ -0.57
TCOF1-212ENST00000513538 FDX1P10109 184 aa11.46□□□□□ -0.57
TCOF1-212ENST00000513538 ALAS1P13196 640 aa11.46□□□□□ -0.57
TCOF1-212ENST00000513538 RAB30Q15771 203 aa11.46□□□□□ -0.57
TCOF1-212ENST00000513538 ZMYM1Q5SVZ6 1142 aa11.46□□□□□ -0.57
TCOF1-212ENST00000513538 FAM160B2Q86V87 743 aa11.46□□□□□ -0.57
TCOF1-212ENST00000513538 ASB2Q96Q27 587 aa11.46□□□□□ -0.57
TCOF1-212ENST00000513538 CHMP4BQ9H444 224 aaKnown RBP11.46□□□□□ -0.57
TCOF1-212ENST00000513538 ZNF287Q9HBT7 754 aa11.46□□□□□ -0.57
TCOF1-212ENST00000513538 CYP39A1Q9NYL5 469 aa11.46□□□□□ -0.57
TCOF1-212ENST00000513538 THEGQ9P2T0 379 aa11.46□□□□□ -0.57
TCOF1-212ENST00000513538 PRR12Q9ULL5 1215 aa11.46□□□□□ -0.57
TCOF1-212ENST00000513538 ISY1Q9ULR0 285 aaKnown RBP11.46□□□□□ -0.57
TCOF1-212ENST00000513538 PRRC2BQ5JSZ5 2229 aaKnown RBP11.45□□□□□ -0.58
TCOF1-212ENST00000513538 TET1Q8NFU7 2136 aa11.45□□□□□ -0.58
TCOF1-212ENST00000513538 ASB14A6NK59 587 aa11.45□□□□□ -0.58
TCOF1-212ENST00000513538 PLA2G6O60733 806 aa11.45□□□□□ -0.58
TCOF1-212ENST00000513538 CABYRO75952 493 aa11.45□□□□□ -0.58
TCOF1-212ENST00000513538 FGBP02675 491 aa11.45□□□□□ -0.58
TCOF1-212ENST00000513538 COL9A1P20849 921 aa11.45□□□□□ -0.58
TCOF1-212ENST00000513538 IGFBP4P22692 258 aa11.45□□□□□ -0.58
TCOF1-212ENST00000513538 SLC1A4P43007 532 aa11.45□□□□□ -0.58
TCOF1-212ENST00000513538 CTDSPL2Q05D32 466 aa11.45□□□□□ -0.58
TCOF1-212ENST00000513538 PDE4BQ07343 736 aa11.45□□□□□ -0.58
TCOF1-212ENST00000513538 TKFCQ3LXA3 575 aa11.45□□□□□ -0.58
TCOF1-212ENST00000513538 ADAMTS19Q8TE59 1207 aa11.45□□□□□ -0.58
TCOF1-212ENST00000513538 MORC4Q8TE76 937 aa11.45□□□□□ -0.58
TCOF1-212ENST00000513538 ATXN2LQ8WWM7 1075 aaKnown RBP11.45□□□□□ -0.58
TCOF1-212ENST00000513538 SCLYQ96I15 445 aa11.45□□□□□ -0.58
TCOF1-212ENST00000513538 NAPBQ9H115 298 aa11.45□□□□□ -0.58
TCOF1-212ENST00000513538 MSRAQ9UJ68 235 aa11.45□□□□□ -0.58
TCOF1-212ENST00000513538 REV3LO60673 3130 aa11.44□□□□□ -0.58
TCOF1-212ENST00000513538 RBAK-RBAKDNI3L0D1 243 aa11.44□□□□□ -0.58
TCOF1-212ENST00000513538 NOVP48745 357 aa11.44□□□□□ -0.58
TCOF1-212ENST00000513538 IKQ13123 557 aaPredicted RBP11.44□□□□□ -0.58
TCOF1-212ENST00000513538 TTLL4Q14679 1199 aa11.44□□□□□ -0.58
TCOF1-212ENST00000513538 VPS53Q5VIR6 699 aa11.44□□□□□ -0.58
TCOF1-212ENST00000513538 IQSEC1Q6DN90 963 aa11.44□□□□□ -0.58
TCOF1-212ENST00000513538 TTBK2Q6IQ55 1244 aa11.44□□□□□ -0.58
TCOF1-212ENST00000513538 RCSD1Q6JBY9 416 aa11.44□□□□□ -0.58
TCOF1-212ENST00000513538 NSMFQ6X4W1 530 aa11.44□□□□□ -0.58
TCOF1-212ENST00000513538 PPP1R13LQ8WUF5 828 aa11.44□□□□□ -0.58
TCOF1-212ENST00000513538 CHURC1Q8WUH1 139 aa11.44□□□□□ -0.58
TCOF1-212ENST00000513538 GPATCH3Q96I76 525 aa11.44□□□□□ -0.58
TCOF1-212ENST00000513538 NECAB3Q96P71 396 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms