RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 hCG_1642624A0A1W2PR95 340 aa19.07■□□□□ 0.64
HMGCL-209ENST00000513148 RCAN1P53805 252 aa19.07■□□□□ 0.64
HMGCL-209ENST00000513148 RABEP1Q15276 862 aa19.07■□□□□ 0.64
HMGCL-209ENST00000513148 LZTS2Q9BRK4 669 aa19.07■□□□□ 0.64
HMGCL-209ENST00000513148 SPZ1Q9BXG8 430 aa19.07■□□□□ 0.64
HMGCL-209ENST00000513148 ALDH8A1Q9H2A2 487 aaPredicted RBP19.07■□□□□ 0.64
HMGCL-209ENST00000513148 MROH8Q9H579 483 aa19.07■□□□□ 0.64
HMGCL-209ENST00000513148 FAM217BQ9NTX9 383 aaPredicted RBP19.07■□□□□ 0.64
HMGCL-209ENST00000513148 PPFIA3O75145 1194 aa19.07■□□□□ 0.64
HMGCL-209ENST00000513148 RNF146Q9NTX7 359 aa19.07■□□□□ 0.64
HMGCL-209ENST00000513148 ZBTB5O15062 677 aa19.06■□□□□ 0.64
HMGCL-209ENST00000513148 SKOR2Q2VWA4 1001 aaPredicted RBP19.06■□□□□ 0.64
HMGCL-209ENST00000513148 ZNF274Q96GC6 653 aaPredicted RBP19.06■□□□□ 0.64
HMGCL-209ENST00000513148 TRERF1Q96PN7 1200 aa19.06■□□□□ 0.64
HMGCL-209ENST00000513148 SRRDQ9UH36 339 aa19.06■□□□□ 0.64
HMGCL-209ENST00000513148 NID2Q14112 1375 aa19.06■□□□□ 0.64
HMGCL-209ENST00000513148 HOXD10P28358 340 aa19.05■□□□□ 0.64
HMGCL-209ENST00000513148 COPB2P35606 906 aa19.05■□□□□ 0.64
HMGCL-209ENST00000513148 MUM1L1Q5H9M0 696 aa19.05■□□□□ 0.64
HMGCL-209ENST00000513148 FBXO11Q86XK2 927 aa19.05■□□□□ 0.64
HMGCL-209ENST00000513148 MTMR8Q96EF0 704 aa19.05■□□□□ 0.64
HMGCL-209ENST00000513148 RRP36Q96EU6 259 aaKnown RBP19.05■□□□□ 0.64
HMGCL-209ENST00000513148 CNTNAP5Q8WYK1 1306 aa19.05■□□□□ 0.64
HMGCL-209ENST00000513148 CCDC196A0A1B0GTZ2 297 aa19.05■□□□□ 0.64
HMGCL-209ENST00000513148 PPP1R11O60927 126 aaPredicted RBP19.05■□□□□ 0.64
HMGCL-209ENST00000513148 LARGE1O95461 756 aa19.05■□□□□ 0.64
HMGCL-209ENST00000513148 GNRH1P01148 92 aa19.05■□□□□ 0.64
HMGCL-209ENST00000513148 FLT3LGP49771 235 aa19.05■□□□□ 0.64
HMGCL-209ENST00000513148 MMP19Q99542 508 aa19.05■□□□□ 0.64
HMGCL-209ENST00000513148 SEC63Q9UGP8 760 aaKnown RBP19.05■□□□□ 0.64
HMGCL-209ENST00000513148 FCER1AP12319 257 aa19.04■□□□□ 0.64
HMGCL-209ENST00000513148 PTPREP23469 700 aa19.04■□□□□ 0.64
HMGCL-209ENST00000513148 COL13A1Q5TAT6 717 aaPredicted RBP19.04■□□□□ 0.64
HMGCL-209ENST00000513148 NUDT12Q9BQG2 462 aa19.04■□□□□ 0.64
HMGCL-209ENST00000513148 ACAD9Q9H845 621 aa19.04■□□□□ 0.64
HMGCL-209ENST00000513148 ZNFX1Q9P2E3 1918 aaKnown RBP19.04■□□□□ 0.64
HMGCL-209ENST00000513148 CYP2B6P20813 491 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 ADORA2AP29274 412 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 GRB14Q14449 540 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 KCTD2Q14681 263 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 PPP2R5BQ15173 497 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 CHST13Q8NET6 341 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 RAET1EQ8TD07 263 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 AMNQ9BXJ7 453 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 PTCH2Q9Y6C5 1203 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 PNMA6FA0A0J9YX94 578 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 NFIBO00712 420 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 PGK2P07205 417 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 SMARCA1P28370 1054 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 FUT2Q10981 343 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 SCRN1Q12765 414 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 ME3Q16798 604 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 TKFCQ3LXA3 575 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 MORN1Q5T089 497 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 MTERF4Q7Z6M4 381 aaKnown RBP19.03■□□□□ 0.64
HMGCL-209ENST00000513148 ANKRD35Q8N283 1001 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 NECAB1Q8N987 351 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 SOCS4Q8WXH5 440 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 PHKBQ93100 1093 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 FBXO40Q9UH90 709 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 GJD2Q9UKL4 321 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 PTPN22Q9Y2R2 807 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 PCDHA1Q9Y5I3 950 aa19.03■□□□□ 0.64
HMGCL-209ENST00000513148 RBBP6Q7Z6E9 1792 aaKnown RBP19.03■□□□□ 0.64
HMGCL-209ENST00000513148 ZNF236Q9UL36 1845 aa19.02■□□□□ 0.64
HMGCL-209ENST00000513148 SLC15A5A6NIM6 579 aa19.02■□□□□ 0.64
HMGCL-209ENST00000513148 CPLX1O14810 134 aa19.02■□□□□ 0.64
HMGCL-209ENST00000513148 STRNO43815 780 aa19.02■□□□□ 0.64
HMGCL-209ENST00000513148 ST18O60284 1047 aa19.02■□□□□ 0.64
HMGCL-209ENST00000513148 DTNBO60941 627 aa19.02■□□□□ 0.64
HMGCL-209ENST00000513148 NSMFQ6X4W1 530 aa19.02■□□□□ 0.64
HMGCL-209ENST00000513148 PRDM4Q9UKN5 801 aa19.02■□□□□ 0.64
HMGCL-209ENST00000513148 CIZ1Q9ULV3 898 aaPredicted RBP19.02■□□□□ 0.64
HMGCL-209ENST00000513148 OFD1O75665 1012 aa19.01■□□□□ 0.63
HMGCL-209ENST00000513148 DPP9Q86TI2 863 aa19.01■□□□□ 0.63
HMGCL-209ENST00000513148 DDX11Q96FC9 970 aa19.01■□□□□ 0.63
HMGCL-209ENST00000513148 PPP1R9BQ96SB3 815 aa19.01■□□□□ 0.63
HMGCL-209ENST00000513148 PNMA2Q9UL42 364 aa19.01■□□□□ 0.63
HMGCL-209ENST00000513148 V9GY48 417 aaPredicted RBP19.01■□□□□ 0.63
HMGCL-209ENST00000513148 ABCB11O95342 1321 aa19.01■□□□□ 0.63
HMGCL-209ENST00000513148 PLXNA1Q9UIW2 1896 aa19.01■□□□□ 0.63
HMGCL-209ENST00000513148 PFKFB2O60825 505 aa19.01■□□□□ 0.63
HMGCL-209ENST00000513148 RGS2P41220 211 aa19.01■□□□□ 0.63
HMGCL-209ENST00000513148 MAP2K5Q13163 448 aa19.01■□□□□ 0.63
HMGCL-209ENST00000513148 GPKOWQ92917 476 aaPredicted RBP eCLIP19.01■□□□□ 0.63
HMGCL-209ENST00000513148 SLC26A6Q9BXS9 759 aa19.01■□□□□ 0.63
HMGCL-209ENST00000513148 MCOLN1Q9GZU1 580 aa19.01■□□□□ 0.63
HMGCL-209ENST00000513148 A1CFQ9NQ94 594 aaKnown RBP19.01■□□□□ 0.63
HMGCL-209ENST00000513148 LIMCH1Q9UPQ0 1083 aa19.01■□□□□ 0.63
HMGCL-209ENST00000513148 PTPDC1A2A3K4 754 aa19■□□□□ 0.63
HMGCL-209ENST00000513148 COBLO75128 1261 aa19■□□□□ 0.63
HMGCL-209ENST00000513148 CD2BP2O95400 341 aaKnown RBP19■□□□□ 0.63
HMGCL-209ENST00000513148 CCDC173Q0VFZ6 552 aa19■□□□□ 0.63
HMGCL-209ENST00000513148 NTRK3Q16288 839 aa19■□□□□ 0.63
HMGCL-209ENST00000513148 HS1BP3Q53T59 392 aa19■□□□□ 0.63
HMGCL-209ENST00000513148 HEATR3Q7Z4Q2 680 aa19■□□□□ 0.63
HMGCL-209ENST00000513148 CLEC4DQ8WXI8 215 aa19■□□□□ 0.63
HMGCL-209ENST00000513148 ELNP15502 786 aa19■□□□□ 0.63
HMGCL-209ENST00000513148 PRMT2P55345 433 aa19■□□□□ 0.63
HMGCL-209ENST00000513148 FBXO46Q6PJ61 603 aaPredicted RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms