RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 CDAN1Q8IWY9 1227 aa10.9□□□□□ -0.66
MSH3-203ENST00000512531 RNF214Q8ND24 703 aa10.9□□□□□ -0.66
MSH3-203ENST00000512531 NKX2-3Q8TAU0 364 aa10.9□□□□□ -0.66
MSH3-203ENST00000512531 OTUD5Q96G74 571 aa10.9□□□□□ -0.66
MSH3-203ENST00000512531 ALG1Q9BT22 464 aa10.9□□□□□ -0.66
MSH3-203ENST00000512531 DACT1Q9NYF0 836 aa10.9□□□□□ -0.66
MSH3-203ENST00000512531 TFIP11Q9UBB9 837 aaKnown RBP10.9□□□□□ -0.66
MSH3-203ENST00000512531 ARPP21Q9UBL0 812 aaPredicted RBP10.9□□□□□ -0.66
MSH3-203ENST00000512531 CEP290O15078 2479 aa10.9□□□□□ -0.67
MSH3-203ENST00000512531 NID2Q14112 1375 aa10.9□□□□□ -0.67
MSH3-203ENST00000512531 MYH15Q9Y2K3 1946 aa10.9□□□□□ -0.67
MSH3-203ENST00000512531 GSG1L2A8MUP6 293 aa10.89□□□□□ -0.67
MSH3-203ENST00000512531 BTBD19C9JJ37 291 aa10.89□□□□□ -0.67
MSH3-203ENST00000512531 DEXIO95424 95 aa10.89□□□□□ -0.67
MSH3-203ENST00000512531 CTDNEP1O95476 244 aa10.89□□□□□ -0.67
MSH3-203ENST00000512531 FAM160A1Q05DH4 1040 aa10.89□□□□□ -0.67
MSH3-203ENST00000512531 SLC4A8Q2Y0W8 1093 aa10.89□□□□□ -0.67
MSH3-203ENST00000512531 APOBEC3HQ6NTF7 200 aaKnown RBP10.89□□□□□ -0.67
MSH3-203ENST00000512531 C17orf99Q6UX52 265 aa10.89□□□□□ -0.67
MSH3-203ENST00000512531 ANKRD23Q86SG2 305 aa10.89□□□□□ -0.67
MSH3-203ENST00000512531 MICU3Q86XE3 530 aa10.89□□□□□ -0.67
MSH3-203ENST00000512531 TBC1D10CQ8IV04 446 aa10.89□□□□□ -0.67
MSH3-203ENST00000512531 CCAR1Q8IX12 1150 aaKnown RBP10.89□□□□□ -0.67
MSH3-203ENST00000512531 MRPS27Q92552 414 aaKnown RBP10.89□□□□□ -0.67
MSH3-203ENST00000512531 WRNIP1Q96S55 665 aa10.89□□□□□ -0.67
MSH3-203ENST00000512531 ZNF341Q9BYN7 854 aa10.89□□□□□ -0.67
MSH3-203ENST00000512531 NCOA5Q9HCD5 579 aaKnown RBP10.89□□□□□ -0.67
MSH3-203ENST00000512531 ANO10Q9NW15 660 aa10.89□□□□□ -0.67
MSH3-203ENST00000512531 USP25Q9UHP3 1055 aa10.89□□□□□ -0.67
MSH3-203ENST00000512531 ZNF112Q9UJU3 913 aa10.89□□□□□ -0.67
MSH3-203ENST00000512531 KCNH4Q9UQ05 1017 aa10.89□□□□□ -0.67
MSH3-203ENST00000512531 MYH13Q9UKX3 1938 aa10.89□□□□□ -0.67
MSH3-203ENST00000512531 MINDY4BA8MYZ0 360 aa10.88□□□□□ -0.67
MSH3-203ENST00000512531 FMNL1O95466 1100 aaPredicted RBP10.88□□□□□ -0.67
MSH3-203ENST00000512531 BMP15O95972 392 aa10.88□□□□□ -0.67
MSH3-203ENST00000512531 IFNAR1P17181 557 aa10.88□□□□□ -0.67
MSH3-203ENST00000512531 ANTXR2P58335 489 aa10.88□□□□□ -0.67
MSH3-203ENST00000512531 TYRO3Q06418 890 aa10.88□□□□□ -0.67
MSH3-203ENST00000512531 STX1AQ16623 288 aa10.88□□□□□ -0.67
MSH3-203ENST00000512531 NOL9Q5SY16 702 aaKnown RBP10.88□□□□□ -0.67
MSH3-203ENST00000512531 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.88□□□□□ -0.67
MSH3-203ENST00000512531 LCORLQ8N3X6 602 aa10.88□□□□□ -0.67
MSH3-203ENST00000512531 IGDCC4Q8TDY8 1250 aa10.88□□□□□ -0.67
MSH3-203ENST00000512531 FAM151AQ8WW52 585 aa10.88□□□□□ -0.67
MSH3-203ENST00000512531 TSC1Q92574 1164 aa10.88□□□□□ -0.67
MSH3-203ENST00000512531 CHAMP1Q96JM3 812 aa10.88□□□□□ -0.67
MSH3-203ENST00000512531 LY9Q9HBG7 655 aa10.88□□□□□ -0.67
MSH3-203ENST00000512531 NOL7Q9UMY1 257 aaKnown RBP10.88□□□□□ -0.67
MSH3-203ENST00000512531 MAST2Q6P0Q8 1798 aa10.88□□□□□ -0.67
MSH3-203ENST00000512531 BRCA2P51587 3418 aa10.87□□□□□ -0.67
MSH3-203ENST00000512531 BECN2A8MW95 431 aa10.87□□□□□ -0.67
MSH3-203ENST00000512531 SPTLC2O15270 562 aa10.87□□□□□ -0.67
MSH3-203ENST00000512531 FOXP2O15409 715 aa10.87□□□□□ -0.67
MSH3-203ENST00000512531 PPP6R2O75170 966 aa10.87□□□□□ -0.67
MSH3-203ENST00000512531 DDAH1O94760 285 aa10.87□□□□□ -0.67
MSH3-203ENST00000512531 LDHBP07195 334 aaKnown RBP10.87□□□□□ -0.67
MSH3-203ENST00000512531 KIF5BP33176 963 aa10.87□□□□□ -0.67
MSH3-203ENST00000512531 CHAF1AQ13111 956 aaPredicted RBP10.87□□□□□ -0.67
MSH3-203ENST00000512531 NR6A1Q15406 480 aa10.87□□□□□ -0.67
MSH3-203ENST00000512531 GRIK5Q16478 980 aa10.87□□□□□ -0.67
MSH3-203ENST00000512531 IFIT1BQ5T764 474 aaKnown RBP10.87□□□□□ -0.67
MSH3-203ENST00000512531 RBM43Q6ZSC3 357 aaKnown RBP10.87□□□□□ -0.67
MSH3-203ENST00000512531 FSIP1Q8NA03 581 aa10.87□□□□□ -0.67
MSH3-203ENST00000512531 MIGA1Q8NAN2 632 aa10.87□□□□□ -0.67
MSH3-203ENST00000512531 SDF4Q9BRK5 362 aa10.87□□□□□ -0.67
MSH3-203ENST00000512531 ZSWIM5Q9P217 1185 aa10.87□□□□□ -0.67
MSH3-203ENST00000512531 SRRDQ9UH36 339 aa10.87□□□□□ -0.67
MSH3-203ENST00000512531 NEDD4P46934 1319 aa10.86□□□□□ -0.67
MSH3-203ENST00000512531 ADGRA2Q96PE1 1338 aa10.86□□□□□ -0.67
MSH3-203ENST00000512531 TRIOBPQ9H2D6 2365 aa10.86□□□□□ -0.67
MSH3-203ENST00000512531 CXCL11O14625 94 aa10.86□□□□□ -0.67
MSH3-203ENST00000512531 NRDCO43847 1150 aa10.86□□□□□ -0.67
MSH3-203ENST00000512531 GNAQP50148 359 aa10.86□□□□□ -0.67
MSH3-203ENST00000512531 CEBPZQ03701 1054 aaKnown RBP10.86□□□□□ -0.67
MSH3-203ENST00000512531 RILPL1Q5EBL4 403 aa10.86□□□□□ -0.67
MSH3-203ENST00000512531 DMRTA1Q5VZB9 504 aa10.86□□□□□ -0.67
MSH3-203ENST00000512531 ANO1Q5XXA6 986 aa10.86□□□□□ -0.67
MSH3-203ENST00000512531 CYB5R4Q7L1T6 521 aa10.86□□□□□ -0.67
MSH3-203ENST00000512531 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.86□□□□□ -0.67
MSH3-203ENST00000512531 CEP57L1Q8IYX8 460 aa10.86□□□□□ -0.67
MSH3-203ENST00000512531 CTCFLQ8NI51 663 aaPredicted RBP10.86□□□□□ -0.67
MSH3-203ENST00000512531 ZKSCAN4Q969J2 545 aaPredicted RBP10.86□□□□□ -0.67
MSH3-203ENST00000512531 USP28Q96RU2 1077 aa10.86□□□□□ -0.67
MSH3-203ENST00000512531 SLC26A6Q9BXS9 759 aa10.86□□□□□ -0.67
MSH3-203ENST00000512531 RNF26Q9BY78 433 aaPredicted RBP10.86□□□□□ -0.67
MSH3-203ENST00000512531 FOXP1Q9H334 677 aaPredicted RBP10.86□□□□□ -0.67
MSH3-203ENST00000512531 EPB41L4AQ9HCS5 686 aaPredicted RBP10.86□□□□□ -0.67
MSH3-203ENST00000512531 FAM13BQ9NYF5 915 aa10.86□□□□□ -0.67
MSH3-203ENST00000512531 USTQ9Y2C2 406 aa10.86□□□□□ -0.67
MSH3-203ENST00000512531 ORC4O43929 436 aa10.85□□□□□ -0.67
MSH3-203ENST00000512531 RANBP6O60518 1105 aaKnown RBP10.85□□□□□ -0.67
MSH3-203ENST00000512531 GJB1P08034 283 aa10.85□□□□□ -0.67
MSH3-203ENST00000512531 FDPSP14324 419 aaKnown RBP10.85□□□□□ -0.67
MSH3-203ENST00000512531 LIG1P18858 919 aa10.85□□□□□ -0.67
MSH3-203ENST00000512531 PSMC4P43686 418 aa10.85□□□□□ -0.67
MSH3-203ENST00000512531 USP5P45974 858 aa10.85□□□□□ -0.67
MSH3-203ENST00000512531 GJA8P48165 433 aa10.85□□□□□ -0.67
MSH3-203ENST00000512531 CACNB3P54284 484 aa10.85□□□□□ -0.67
MSH3-203ENST00000512531 GUCY1B3Q02153 619 aa10.85□□□□□ -0.67
MSH3-203ENST00000512531 SBK1Q52WX2 424 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms