RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 TFR2Q9UP52 801 aa13.31□□□□□ -0.28
PRDM16-207ENST00000512462 FAM13AO94988 1023 aa13.31□□□□□ -0.28
PRDM16-207ENST00000512462 CXCR5P32302 372 aa13.31□□□□□ -0.28
PRDM16-207ENST00000512462 PRR5LQ6MZQ0 368 aa13.31□□□□□ -0.28
PRDM16-207ENST00000512462 KRT27Q7Z3Y8 459 aa13.31□□□□□ -0.28
PRDM16-207ENST00000512462 VSTM4Q8IW00 320 aa13.31□□□□□ -0.28
PRDM16-207ENST00000512462 SLC35F6Q8N357 371 aa13.31□□□□□ -0.28
PRDM16-207ENST00000512462 VPS18Q9P253 973 aa13.31□□□□□ -0.28
PRDM16-207ENST00000512462 GTPBP6O43824 516 aaPredicted RBP13.3□□□□□ -0.28
PRDM16-207ENST00000512462 CHRM1P11229 460 aaPredicted RBP13.3□□□□□ -0.28
PRDM16-207ENST00000512462 AKR1B1P15121 316 aa13.3□□□□□ -0.28
PRDM16-207ENST00000512462 CHRNA5P30532 468 aa13.3□□□□□ -0.28
PRDM16-207ENST00000512462 TOB1P50616 345 aaPredicted RBP13.3□□□□□ -0.28
PRDM16-207ENST00000512462 GPBP1Q86WP2 473 aa13.3□□□□□ -0.28
PRDM16-207ENST00000512462 TBC1D22AQ8WUA7 517 aa13.3□□□□□ -0.28
PRDM16-207ENST00000512462 SH2D3AQ9BRG2 576 aa13.3□□□□□ -0.28
PRDM16-207ENST00000512462 STRCQ7RTU9 1775 aa13.3□□□□□ -0.28
PRDM16-207ENST00000512462 BICDL2A1A5D9 508 aa13.3□□□□□ -0.28
PRDM16-207ENST00000512462 GJC1P36383 396 aa13.3□□□□□ -0.28
PRDM16-207ENST00000512462 ALX1Q15699 326 aa13.3□□□□□ -0.28
PRDM16-207ENST00000512462 TXNRD1Q16881 649 aa13.3□□□□□ -0.28
PRDM16-207ENST00000512462 ERMNQ8TAM6 284 aa13.3□□□□□ -0.28
PRDM16-207ENST00000512462 CSRNP1Q96S65 589 aa13.3□□□□□ -0.28
PRDM16-207ENST00000512462 C21orf2O43822 256 aa13.3□□□□□ -0.28
PRDM16-207ENST00000512462 TDP2O95551 362 aa13.3□□□□□ -0.28
PRDM16-207ENST00000512462 TAL1P17542 331 aaPredicted RBP13.3□□□□□ -0.28
PRDM16-207ENST00000512462 FGFR2P21802 821 aa13.3□□□□□ -0.28
PRDM16-207ENST00000512462 NCBP1Q09161 790 aaKnown RBP13.3□□□□□ -0.28
PRDM16-207ENST00000512462 KRT31Q15323 416 aa13.3□□□□□ -0.28
PRDM16-207ENST00000512462 KMT5BQ4FZB7 885 aa13.3□□□□□ -0.28
PRDM16-207ENST00000512462 DDX25Q9UHL0 483 aaKnown RBP13.3□□□□□ -0.28
PRDM16-207ENST00000512462 PARP4Q9UKK3 1724 aaKnown RBP13.29□□□□□ -0.28
PRDM16-207ENST00000512462 GCNT3O95395 438 aa13.29□□□□□ -0.28
PRDM16-207ENST00000512462 PRCPP42785 496 aa13.29□□□□□ -0.28
PRDM16-207ENST00000512462 POTEDQ86YR6 584 aa13.29□□□□□ -0.28
PRDM16-207ENST00000512462 JAKMIP2Q96AA8 810 aa13.29□□□□□ -0.28
PRDM16-207ENST00000512462 ALS2CR12Q96Q35 445 aa13.29□□□□□ -0.28
PRDM16-207ENST00000512462 TUBGCP2Q9BSJ2 902 aa13.29□□□□□ -0.28
PRDM16-207ENST00000512462 TMEM60Q9H2L4 133 aa13.29□□□□□ -0.28
PRDM16-207ENST00000512462 TRPC5Q9UL62 973 aaPredicted RBP13.29□□□□□ -0.28
PRDM16-207ENST00000512462 BCS1LQ9Y276 419 aa13.29□□□□□ -0.28
PRDM16-207ENST00000512462 RFX7Q2KHR2 1363 aa13.29□□□□□ -0.28
PRDM16-207ENST00000512462 IKBKBO14920 756 aa13.29□□□□□ -0.28
PRDM16-207ENST00000512462 FCER1AP12319 257 aa13.29□□□□□ -0.28
PRDM16-207ENST00000512462 CNNM4Q6P4Q7 775 aa13.29□□□□□ -0.28
PRDM16-207ENST00000512462 CYP26C1Q6V0L0 522 aa13.29□□□□□ -0.28
PRDM16-207ENST00000512462 CNOT6LQ96LI5 555 aaKnown RBP13.29□□□□□ -0.28
PRDM16-207ENST00000512462 USP17L10C9JJH3 530 aa13.29□□□□□ -0.28
PRDM16-207ENST00000512462 NTRK3Q16288 839 aa13.29□□□□□ -0.28
PRDM16-207ENST00000512462 FOXP4Q8IVH2 680 aaPredicted RBP13.29□□□□□ -0.28
PRDM16-207ENST00000512462 CTNNBL1Q8WYA6 563 aaPredicted RBP13.29□□□□□ -0.28
PRDM16-207ENST00000512462 TIGD1Q96MW7 591 aa13.29□□□□□ -0.28
PRDM16-207ENST00000512462 GSDMAQ96QA5 445 aa13.29□□□□□ -0.28
PRDM16-207ENST00000512462 NAPGQ99747 312 aaPredicted RBP13.29□□□□□ -0.28
PRDM16-207ENST00000512462 TSPYL1Q9H0U9 437 aa13.29□□□□□ -0.28
PRDM16-207ENST00000512462 FAM217BQ9NTX9 383 aaPredicted RBP13.29□□□□□ -0.28
PRDM16-207ENST00000512462 PFKFB3Q16875 520 aaPredicted RBP13.28□□□□□ -0.28
PRDM16-207ENST00000512462 E4F1Q66K89 784 aaPredicted RBP13.28□□□□□ -0.28
PRDM16-207ENST00000512462 FBXO38Q6PIJ6 1188 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 BICD1Q96G01 975 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 GLI3P10071 1580 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 TCRBV5S4A2TA0A5A2 114 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 TACC1O75410 805 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 GYS2P54840 703 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 TROAPQ12815 778 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 SEPT2Q15019 361 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 VGLL2Q8N8G2 317 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 OR8K1Q8NGG5 319 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 FAM212AQ96EL1 285 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 TRIM31Q9BZY9 425 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 CLIC2O15247 247 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 MAGEA1P43355 309 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 CCZ1BP86790 482 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 CCZ1P86791 482 aaPredicted RBP13.28□□□□□ -0.28
PRDM16-207ENST00000512462 TNIP1Q15025 636 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 DLGAP5Q15398 846 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 ARHGAP44Q17R89 818 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 C12orf60Q5U649 245 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 SLC30A10Q6XR72 485 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 ADAT2Q7Z6V5 191 aaKnown RBP13.28□□□□□ -0.28
PRDM16-207ENST00000512462 CCDC65Q8IXS2 484 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 ENOX1Q8TC92 643 aaKnown RBP13.28□□□□□ -0.28
PRDM16-207ENST00000512462 RIOK1Q9BRS2 568 aaKnown RBP13.28□□□□□ -0.28
PRDM16-207ENST00000512462 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.28□□□□□ -0.281e-6■■■■■ 31.8
PRDM16-207ENST00000512462 HDAC9Q9UKV0 1011 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.28□□□□□ -0.28
PRDM16-207ENST00000512462 PNPLA7Q6ZV29 1317 aa13.28□□□□□ -0.28
PRDM16-207ENST00000512462 SMIM23A6NLE4 172 aa13.27□□□□□ -0.28
PRDM16-207ENST00000512462 FOXP2O15409 715 aa13.27□□□□□ -0.28
PRDM16-207ENST00000512462 CYP2J2P51589 502 aa13.27□□□□□ -0.28
PRDM16-207ENST00000512462 SF3B3Q15393 1217 aaKnown RBP13.27□□□□□ -0.28
PRDM16-207ENST00000512462 MYCT1Q8N699 235 aa13.27□□□□□ -0.28
PRDM16-207ENST00000512462 JDP2Q8WYK2 163 aa13.27□□□□□ -0.28
PRDM16-207ENST00000512462 GJD4Q96KN9 370 aaPredicted RBP13.27□□□□□ -0.28
PRDM16-207ENST00000512462 MRPL44Q9H9J2 332 aaKnown RBP13.27□□□□□ -0.28
PRDM16-207ENST00000512462 PTPAQ15257 358 aa13.27□□□□□ -0.29
PRDM16-207ENST00000512462 IL17RAQ96F46 866 aa13.27□□□□□ -0.29
PRDM16-207ENST00000512462 WDR24Q96S15 920 aa13.27□□□□□ -0.29
PRDM16-207ENST00000512462 DISC1Q9NRI5 854 aa13.27□□□□□ -0.29
PRDM16-207ENST00000512462 SEMA3EO15041 775 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms