RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.65□□□□□ -1.02
NR1I3-231ENST00000512340 ZNF467Q7Z7K2 595 aaPredicted RBP8.65□□□□□ -1.02
NR1I3-231ENST00000512340 MICU3Q86XE3 530 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 TEX2Q8IWB9 1127 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 RASEFQ8IZ41 740 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 FBXL16Q8N461 479 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 RGS22Q8NE09 1264 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 REPS2Q8NFH8 660 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 CUL5Q93034 780 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 AGBL1Q96MI9 1066 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 SPZ1Q9BXG8 430 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 UBA5Q9GZZ9 404 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 GLT8D2Q9H1C3 349 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 PDRG1Q9NUG6 133 aa8.65□□□□□ -1.02
NR1I3-231ENST00000512340 MAP3K20Q9NYL2 800 aaKnown RBP8.65□□□□□ -1.02
NR1I3-231ENST00000512340 DOCK3Q8IZD9 2030 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 PTPDC1A2A3K4 754 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 GOLGA8AA7E2F4 631 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 GOLGA8BA8MQT2 603 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 hCG_1984214I3L0E3 225 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 CDKL5O76039 1030 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 ELNP15502 786 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 CTGFP29279 349 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 CNGA1P29973 690 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 METAP2P50579 478 aaKnown RBP eCLIP8.64□□□□□ -1.03
NR1I3-231ENST00000512340 USH1GQ495M9 461 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 APOA5Q6Q788 366 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 RNF207Q6ZRF8 634 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 Q6ZUG5 572 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 HOMER1Q86YM7 354 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 TRIM22Q8IYM9 498 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 ZNF713Q8N859 430 aaPredicted RBP8.64□□□□□ -1.03
NR1I3-231ENST00000512340 SH3TC2Q8TF17 1288 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 CCDC12Q8WUD4 166 aaPredicted RBP8.64□□□□□ -1.03
NR1I3-231ENST00000512340 USP6NLQ92738 828 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 BRF1Q92994 677 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 ZNF333Q96JL9 665 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 EHMT1Q9H9B1 1298 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 ZSWIM6Q9HCJ5 1215 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 MAD2L2Q9UI95 211 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 PCDHA1Q9Y5I3 950 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 HTTP42858 3142 aa8.64□□□□□ -1.03
NR1I3-231ENST00000512340 SYNGAP1Q96PV0 1343 aa8.63□□□□□ -1.03
NR1I3-231ENST00000512340 TFRCP02786 760 aaKnown RBP8.63□□□□□ -1.03
NR1I3-231ENST00000512340 GJB1P08034 283 aa8.63□□□□□ -1.03
NR1I3-231ENST00000512340 CCL5P13501 91 aa8.63□□□□□ -1.03
NR1I3-231ENST00000512340 PRKAR2AP13861 404 aaKnown RBP8.63□□□□□ -1.03
NR1I3-231ENST00000512340 QRICH1Q2TAL8 776 aa8.63□□□□□ -1.03
NR1I3-231ENST00000512340 ADCK5Q3MIX3 580 aa8.63□□□□□ -1.03
NR1I3-231ENST00000512340 MCTP2Q6DN12 878 aa8.63□□□□□ -1.03
NR1I3-231ENST00000512340 DNERQ8NFT8 737 aa8.63□□□□□ -1.03
NR1I3-231ENST00000512340 ZNF274Q96GC6 653 aaPredicted RBP8.63□□□□□ -1.03
NR1I3-231ENST00000512340 MAML3Q96JK9 1138 aa8.63□□□□□ -1.03
NR1I3-231ENST00000512340 LRRC2Q9BYS8 371 aa8.63□□□□□ -1.03
NR1I3-231ENST00000512340 RIOX1Q9H6W3 641 aa8.63□□□□□ -1.03
NR1I3-231ENST00000512340 JMJD4Q9H9V9 463 aa8.63□□□□□ -1.03
NR1I3-231ENST00000512340 SPC25Q9HBM1 224 aa8.63□□□□□ -1.03
NR1I3-231ENST00000512340 TAF6LQ9Y6J9 622 aa8.63□□□□□ -1.03
NR1I3-231ENST00000512340 A0A0G2JMZ2 1700 aa8.63□□□□□ -1.03
NR1I3-231ENST00000512340 CEP290O15078 2479 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 RLFQ13129 1914 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 ZNF536O15090 1300 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 GCOM1H8Y6P7 765 aaPredicted RBP8.62□□□□□ -1.03
NR1I3-231ENST00000512340 PEX10O60683 326 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 PGK2P07205 417 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 POLR2MP0CAP2 368 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 XBP1P17861 261 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 CALML3P27482 149 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 FXR1P51114 621 aaKnown RBP eCLIP8.62□□□□□ -1.03
NR1I3-231ENST00000512340 SNAP25P60880 206 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 POTEEQ6S8J3 1075 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 TMTC3Q6ZXV5 915 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 CCDC144CPQ8IYA2 1237 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 STAG2Q8N3U4 1231 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 ARRDC4Q8NCT1 418 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 NSUN6Q8TEA1 469 aaKnown RBP8.62□□□□□ -1.03
NR1I3-231ENST00000512340 TRIB2Q92519 343 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 TCEANC2Q96MN5 208 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 TINF2Q9BSI4 451 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 C22orf23Q9BZE7 217 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.62□□□□□ -1.03
NR1I3-231ENST00000512340 SLKQ9H2G2 1235 aaPredicted RBP8.62□□□□□ -1.03
NR1I3-231ENST00000512340 ABHD16BQ9H3Z7 469 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 A1CFQ9NQ94 594 aaKnown RBP8.62□□□□□ -1.03
NR1I3-231ENST00000512340 CYP39A1Q9NYL5 469 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 RIPK3Q9Y572 518 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 CENPFP49454 3210 aa8.62□□□□□ -1.03
NR1I3-231ENST00000512340 COL11A1P12107 1806 aaPredicted RBP8.61□□□□□ -1.03
NR1I3-231ENST00000512340 PARP14Q460N5 1801 aa8.61□□□□□ -1.03
NR1I3-231ENST00000512340 MYH6P13533 1939 aa8.61□□□□□ -1.03
NR1I3-231ENST00000512340 ST18O60284 1047 aa8.61□□□□□ -1.03
NR1I3-231ENST00000512340 COBLO75128 1261 aa8.61□□□□□ -1.03
NR1I3-231ENST00000512340 SGPL1O95470 568 aa8.61□□□□□ -1.03
NR1I3-231ENST00000512340 CFBP00751 764 aa8.61□□□□□ -1.03
NR1I3-231ENST00000512340 MYCP01106 439 aaPredicted RBP8.61□□□□□ -1.03
NR1I3-231ENST00000512340 GJA8P48165 433 aa8.61□□□□□ -1.03
NR1I3-231ENST00000512340 NEK4P51957 841 aa8.61□□□□□ -1.03
NR1I3-231ENST00000512340 PDE4DQ08499 809 aa8.61□□□□□ -1.03
NR1I3-231ENST00000512340 APOBRQ0VD83 1088 aa8.61□□□□□ -1.03
NR1I3-231ENST00000512340 BAATQ14032 418 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms