RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 ZBED2Q9BTP6 218 aa9.44□□□□□ -0.9
DEPDC1B-205ENST00000512078 CNTNAP3Q9BZ76 1288 aa9.44□□□□□ -0.9
DEPDC1B-205ENST00000512078 FTOQ9C0B1 505 aaKnown RBP eCLIP9.44□□□□□ -0.9
DEPDC1B-205ENST00000512078 COPRSQ9NQ92 184 aa9.44□□□□□ -0.9
DEPDC1B-205ENST00000512078 TRMT13Q9NUP7 481 aaKnown RBP9.44□□□□□ -0.9
DEPDC1B-205ENST00000512078 AKAP2Q9Y2D5 859 aa9.44□□□□□ -0.9
DEPDC1B-205ENST00000512078 EP300Q09472 2414 aaPredicted RBP9.44□□□□□ -0.9
DEPDC1B-205ENST00000512078 ZNF292O60281 2723 aa9.44□□□□□ -0.9
DEPDC1B-205ENST00000512078 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.43□□□□□ -0.9
DEPDC1B-205ENST00000512078 VWA5AO00534 786 aa9.43□□□□□ -0.9
DEPDC1B-205ENST00000512078 MBTPS2O43462 519 aa9.43□□□□□ -0.9
DEPDC1B-205ENST00000512078 IGSF3O75054 1194 aa9.43□□□□□ -0.9
DEPDC1B-205ENST00000512078 GJB5O95377 273 aa9.43□□□□□ -0.9
DEPDC1B-205ENST00000512078 PTPROQ16827 1216 aa9.43□□□□□ -0.9
DEPDC1B-205ENST00000512078 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.43□□□□□ -0.9
DEPDC1B-205ENST00000512078 ARMCX2Q7L311 632 aa9.43□□□□□ -0.9
DEPDC1B-205ENST00000512078 TMCO2Q7Z6W1 182 aaPredicted RBP9.43□□□□□ -0.9
DEPDC1B-205ENST00000512078 TLK2Q86UE8 772 aa9.43□□□□□ -0.9
DEPDC1B-205ENST00000512078 BANK1Q8NDB2 785 aa9.43□□□□□ -0.9
DEPDC1B-205ENST00000512078 FBXO22Q8NEZ5 403 aa9.43□□□□□ -0.9
DEPDC1B-205ENST00000512078 DDX11Q96FC9 970 aa9.43□□□□□ -0.9
DEPDC1B-205ENST00000512078 RAD9AQ99638 391 aa9.43□□□□□ -0.9
DEPDC1B-205ENST00000512078 VCPKMTQ9H867 229 aa9.43□□□□□ -0.9
DEPDC1B-205ENST00000512078 PA2G4Q9UQ80 394 aaKnown RBP9.43□□□□□ -0.9
DEPDC1B-205ENST00000512078 VPS13AQ96RL7 3174 aa9.43□□□□□ -0.9
DEPDC1B-205ENST00000512078 CHD6Q8TD26 2715 aa9.43□□□□□ -0.9
DEPDC1B-205ENST00000512078 CEP250Q9BV73 2442 aa9.42□□□□□ -0.9
DEPDC1B-205ENST00000512078 LTBRP36941 435 aa9.42□□□□□ -0.9
DEPDC1B-205ENST00000512078 DYNLL1P63167 89 aaKnown RBP9.42□□□□□ -0.9
DEPDC1B-205ENST00000512078 DEFB103AP81534 67 aa9.42□□□□□ -0.9
DEPDC1B-205ENST00000512078 TNFAIP2Q03169 654 aa9.42□□□□□ -0.9
DEPDC1B-205ENST00000512078 SIGLEC14Q08ET2 396 aa9.42□□□□□ -0.9
DEPDC1B-205ENST00000512078 TCEAL5Q5H9L2 206 aa9.42□□□□□ -0.9
DEPDC1B-205ENST00000512078 EP400NLQ6ZTU2 488 aa9.42□□□□□ -0.9
DEPDC1B-205ENST00000512078 SPICE1Q8N0Z3 855 aa9.42□□□□□ -0.9
DEPDC1B-205ENST00000512078 CLDND1Q9NY35 253 aa9.42□□□□□ -0.9
DEPDC1B-205ENST00000512078 PPP1R9AQ9ULJ8 1098 aa9.42□□□□□ -0.9
DEPDC1B-205ENST00000512078 TMX2Q9Y320 296 aa9.42□□□□□ -0.9
DEPDC1B-205ENST00000512078 STXBP3O00186 592 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 GALR2O43603 387 aaPredicted RBP9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 NCK2O43639 380 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 USP5P45974 858 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 GABPAQ06546 454 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 SMAD4Q13485 552 aaKnown RBP9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 DGLUCYQ7Z3D6 616 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 RPAINQ86UA6 219 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 RETREG2Q8NC44 543 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 ASIC4Q96FT7 647 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 C17orf80Q9BSJ5 609 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 TEX13BQ9BXU2 312 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 AP5M1Q9H0R1 490 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 NSUN3Q9H649 340 aaKnown RBP9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 SH2D4AQ9H788 454 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 FBXO28Q9NVF7 368 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 DMXL1Q9Y485 3027 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 MPHOSPH10O00566 681 aaKnown RBP9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 UQCRFS1P1P0C7P4 283 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 PLCD1P51178 756 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 TFCP2Q12800 502 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 CTC1Q2NKJ3 1217 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 LRRFIP1Q32MZ4 808 aaKnown RBP9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 TMEM179Q6ZVK1 233 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 NOL8Q76FK4 1167 aaKnown RBP9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 CERS3Q8IU89 383 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 CCDC144CPQ8IYA2 1237 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 ADSSL1Q8N142 457 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 NKD2Q969F2 451 aaPredicted RBP9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 RMDN1Q96DB5 314 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 NEUROD6Q96NK8 337 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 ARHGEF10LQ9HCE6 1279 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 Q9Y3F1 56 aa9.41□□□□□ -0.9
DEPDC1B-205ENST00000512078 PTPRCP08575 1304 aa9.4□□□□□ -0.9
DEPDC1B-205ENST00000512078 CFAP47Q6ZTR5 3102 aa9.4□□□□□ -0.9
DEPDC1B-205ENST00000512078 LCTP09848 1927 aa9.4□□□□□ -0.9
DEPDC1B-205ENST00000512078 KDM4AO75164 1064 aa9.4□□□□□ -0.9
DEPDC1B-205ENST00000512078 BFSP2Q13515 415 aa9.4□□□□□ -0.9
DEPDC1B-205ENST00000512078 NBPF20Q3BBV1 942 aa9.4□□□□□ -0.9
DEPDC1B-205ENST00000512078 GORABQ5T7V8 394 aa9.4□□□□□ -0.9
DEPDC1B-205ENST00000512078 MCTP2Q6DN12 878 aa9.4□□□□□ -0.9
DEPDC1B-205ENST00000512078 SNRNP48Q6IEG0 339 aaKnown RBP9.4□□□□□ -0.9
DEPDC1B-205ENST00000512078 SIAH1Q8IUQ4 282 aa9.4□□□□□ -0.9
DEPDC1B-205ENST00000512078 SAMD11Q96NU1 681 aa9.4□□□□□ -0.9
DEPDC1B-205ENST00000512078 CRBNQ96SW2 442 aa9.4□□□□□ -0.9
DEPDC1B-205ENST00000512078 RIPK3Q9Y572 518 aa9.4□□□□□ -0.9
DEPDC1B-205ENST00000512078 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.4□□□□□ -0.9
DEPDC1B-205ENST00000512078 H3BNC9 293 aa9.39□□□□□ -0.91
DEPDC1B-205ENST00000512078 DYNC1LI2O43237 492 aaPredicted RBP9.39□□□□□ -0.91
DEPDC1B-205ENST00000512078 SMPD1P17405 629 aa9.39□□□□□ -0.91
DEPDC1B-205ENST00000512078 ICA1Q05084 483 aa9.39□□□□□ -0.91
DEPDC1B-205ENST00000512078 CBX2Q14781 532 aaPredicted RBP9.39□□□□□ -0.91
DEPDC1B-205ENST00000512078 CNKSR3Q6P9H4 555 aa9.39□□□□□ -0.91
DEPDC1B-205ENST00000512078 WDR63Q8IWG1 891 aa9.39□□□□□ -0.91
DEPDC1B-205ENST00000512078 SP7Q8TDD2 431 aaPredicted RBP9.39□□□□□ -0.91
DEPDC1B-205ENST00000512078 SPTBN2O15020 2390 aa9.39□□□□□ -0.91
DEPDC1B-205ENST00000512078 ABHD14A-ACY1A0A1B0GW23 586 aa9.38□□□□□ -0.91
DEPDC1B-205ENST00000512078 LOC730098B7Z3J9 87 aa9.38□□□□□ -0.91
DEPDC1B-205ENST00000512078 ATP2A1O14983 1001 aa9.38□□□□□ -0.91
DEPDC1B-205ENST00000512078 PTGS1P23219 599 aa9.38□□□□□ -0.91
DEPDC1B-205ENST00000512078 DLX2Q07687 328 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms