RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 EP400NLQ6ZTU2 488 aa13.16□□□□□ -0.3
SNF8-207ENST00000509995 NOL8Q76FK4 1167 aaKnown RBP13.16□□□□□ -0.3
SNF8-207ENST00000509995 WDR63Q8IWG1 891 aa13.16□□□□□ -0.3
SNF8-207ENST00000509995 TEX13BQ9BXU2 312 aa13.16□□□□□ -0.3
SNF8-207ENST00000509995 SH2D4AQ9H788 454 aa13.16□□□□□ -0.3
SNF8-207ENST00000509995 ARHGEF10LQ9HCE6 1279 aa13.16□□□□□ -0.3
SNF8-207ENST00000509995 CTNNA3Q9UI47 895 aa13.16□□□□□ -0.3
SNF8-207ENST00000509995 PPP1R9AQ9ULJ8 1098 aa13.16□□□□□ -0.3
SNF8-207ENST00000509995 TMX2Q9Y320 296 aa13.16□□□□□ -0.3
SNF8-207ENST00000509995 ACACBO00763 2458 aa13.16□□□□□ -0.3
SNF8-207ENST00000509995 SCN10AQ9Y5Y9 1956 aa13.15□□□□□ -0.3
SNF8-207ENST00000509995 H0Y858 1186 aa13.15□□□□□ -0.3
SNF8-207ENST00000509995 GJB5O95377 273 aa13.15□□□□□ -0.3
SNF8-207ENST00000509995 UQCRFS1P1P0C7P4 283 aa13.15□□□□□ -0.3
SNF8-207ENST00000509995 UBTFL1P0CB47 393 aaPredicted RBP13.15□□□□□ -0.3
SNF8-207ENST00000509995 DEFB103AP81534 67 aa13.15□□□□□ -0.3
SNF8-207ENST00000509995 SNRNP48Q6IEG0 339 aaKnown RBP13.15□□□□□ -0.3
SNF8-207ENST00000509995 TMEM179Q6ZVK1 233 aa13.15□□□□□ -0.3
SNF8-207ENST00000509995 CLEC10AQ8IUN9 316 aa13.15□□□□□ -0.3
SNF8-207ENST00000509995 CCDC144CPQ8IYA2 1237 aa13.15□□□□□ -0.3
SNF8-207ENST00000509995 FBXO22Q8NEZ5 403 aa13.15□□□□□ -0.3
SNF8-207ENST00000509995 RAD9AQ99638 391 aa13.15□□□□□ -0.3
SNF8-207ENST00000509995 TLR9Q9NR96 1032 aa13.15□□□□□ -0.3
SNF8-207ENST00000509995 PTGS1P23219 599 aa13.14□□□□□ -0.31
SNF8-207ENST00000509995 ICA1Q05084 483 aa13.14□□□□□ -0.31
SNF8-207ENST00000509995 PTPROQ16827 1216 aa13.14□□□□□ -0.31
SNF8-207ENST00000509995 TCEAL5Q5H9L2 206 aa13.14□□□□□ -0.31
SNF8-207ENST00000509995 CERS3Q8IU89 383 aa13.14□□□□□ -0.31
SNF8-207ENST00000509995 SIAH1Q8IUQ4 282 aa13.14□□□□□ -0.31
SNF8-207ENST00000509995 MIGA1Q8NAN2 632 aa13.14□□□□□ -0.31
SNF8-207ENST00000509995 BANK1Q8NDB2 785 aa13.14□□□□□ -0.31
SNF8-207ENST00000509995 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.14□□□□□ -0.31
SNF8-207ENST00000509995 AP5M1Q9H0R1 490 aa13.14□□□□□ -0.31
SNF8-207ENST00000509995 SNRKQ9NRH2 765 aa13.14□□□□□ -0.31
SNF8-207ENST00000509995 CLDND1Q9NY35 253 aa13.14□□□□□ -0.31
SNF8-207ENST00000509995 RIPK3Q9Y572 518 aa13.14□□□□□ -0.31
SNF8-207ENST00000509995 ZNF292O60281 2723 aa13.14□□□□□ -0.31
SNF8-207ENST00000509995 PKD1L2Q7Z442 2459 aa13.14□□□□□ -0.31
SNF8-207ENST00000509995 CHD8Q9HCK8 2581 aa13.14□□□□□ -0.31
SNF8-207ENST00000509995 NLRC5Q86WI3 1866 aa13.13□□□□□ -0.31
SNF8-207ENST00000509995 IGSF3O75054 1194 aa13.13□□□□□ -0.31
SNF8-207ENST00000509995 CYP2E1P05181 493 aaPredicted RBP13.13□□□□□ -0.31
SNF8-207ENST00000509995 CYP7A1P22680 504 aa13.13□□□□□ -0.31
SNF8-207ENST00000509995 ZXDAP98168 799 aa13.13□□□□□ -0.31
SNF8-207ENST00000509995 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.13□□□□□ -0.31
SNF8-207ENST00000509995 C17orf80Q9BSJ5 609 aa13.13□□□□□ -0.31
SNF8-207ENST00000509995 PRKRIP1Q9H875 184 aaPredicted RBP13.13□□□□□ -0.31
SNF8-207ENST00000509995 MICAL3Q7RTP6 2002 aa13.12□□□□□ -0.31
SNF8-207ENST00000509995 MBTPS2O43462 519 aa13.12□□□□□ -0.31
SNF8-207ENST00000509995 AVPR2P30518 371 aa13.12□□□□□ -0.31
SNF8-207ENST00000509995 LTBRP36941 435 aa13.12□□□□□ -0.31
SNF8-207ENST00000509995 NBL1P41271 181 aa13.12□□□□□ -0.31
SNF8-207ENST00000509995 RPAINQ86UA6 219 aa13.12□□□□□ -0.31
SNF8-207ENST00000509995 MRPL50Q8N5N7 158 aaKnown RBP13.12□□□□□ -0.31
SNF8-207ENST00000509995 RETREG2Q8NC44 543 aa13.12□□□□□ -0.31
SNF8-207ENST00000509995 CRBNQ96SW2 442 aa13.12□□□□□ -0.31
SNF8-207ENST00000509995 CHD6Q8TD26 2715 aa13.11□□□□□ -0.31
SNF8-207ENST00000509995 STXBP3O00186 592 aa13.11□□□□□ -0.31
SNF8-207ENST00000509995 DYNC1LI2O43237 492 aaPredicted RBP13.11□□□□□ -0.31
SNF8-207ENST00000509995 POLR3DP05423 398 aaPredicted RBP13.11□□□□□ -0.31
SNF8-207ENST00000509995 SMPD1P17405 629 aa13.11□□□□□ -0.31
SNF8-207ENST00000509995 EVX2Q03828 476 aa13.11□□□□□ -0.31
SNF8-207ENST00000509995 CLUL1Q15846 466 aa13.11□□□□□ -0.31
SNF8-207ENST00000509995 LRRFIP1Q32MZ4 808 aaKnown RBP13.11□□□□□ -0.31
SNF8-207ENST00000509995 ANKRD35Q8N283 1001 aa13.11□□□□□ -0.31
SNF8-207ENST00000509995 CNTNAP3BQ96NU0 1288 aa13.11□□□□□ -0.31
SNF8-207ENST00000509995 CNTNAP3Q9BZ76 1288 aa13.11□□□□□ -0.31
SNF8-207ENST00000509995 NSUN3Q9H649 340 aaKnown RBP13.11□□□□□ -0.31
SNF8-207ENST00000509995 EP300Q09472 2414 aaPredicted RBP13.1□□□□□ -0.31
SNF8-207ENST00000509995 KDM4AO75164 1064 aa13.1□□□□□ -0.31
SNF8-207ENST00000509995 NUBP1P53384 320 aa13.1□□□□□ -0.31
SNF8-207ENST00000509995 SIGLEC14Q08ET2 396 aa13.1□□□□□ -0.31
SNF8-207ENST00000509995 SMAD4Q13485 552 aaKnown RBP13.1□□□□□ -0.31
SNF8-207ENST00000509995 BFSP2Q13515 415 aa13.1□□□□□ -0.31
SNF8-207ENST00000509995 PIH1D3Q9NQM4 214 aaKnown RBP13.1□□□□□ -0.31
SNF8-207ENST00000509995 Q9Y3F1 56 aa13.1□□□□□ -0.31
SNF8-207ENST00000509995 ATRXP46100 2492 aa13.1□□□□□ -0.31
SNF8-207ENST00000509995 ATP2A1O14983 1001 aa13.09□□□□□ -0.31
SNF8-207ENST00000509995 NCK2O43639 380 aa13.09□□□□□ -0.31
SNF8-207ENST00000509995 PURAQ00577 322 aaKnown RBP13.09□□□□□ -0.31
SNF8-207ENST00000509995 DLX2Q07687 328 aaPredicted RBP13.09□□□□□ -0.31
SNF8-207ENST00000509995 CTC1Q2NKJ3 1217 aa13.09□□□□□ -0.31
SNF8-207ENST00000509995 RALGAPA2Q2PPJ7 1873 aa13.09□□□□□ -0.31
SNF8-207ENST00000509995 FAM83BQ5T0W9 1011 aa13.09□□□□□ -0.31
SNF8-207ENST00000509995 CNKSR3Q6P9H4 555 aa13.09□□□□□ -0.31
SNF8-207ENST00000509995 ADSSL1Q8N142 457 aa13.09□□□□□ -0.31
SNF8-207ENST00000509995 ASIC4Q96FT7 647 aa13.09□□□□□ -0.31
SNF8-207ENST00000509995 SLF1Q9BQI6 1058 aa13.09□□□□□ -0.31
SNF8-207ENST00000509995 POLR3EQ9NVU0 708 aa13.09□□□□□ -0.31
SNF8-207ENST00000509995 MAP1BP46821 2468 aaKnown RBP13.08□□□□□ -0.31
SNF8-207ENST00000509995 GALR2O43603 387 aaPredicted RBP13.08□□□□□ -0.32
SNF8-207ENST00000509995 AKR1B1P15121 316 aa13.08□□□□□ -0.32
SNF8-207ENST00000509995 SLC4A3P48751 1232 aa13.08□□□□□ -0.32
SNF8-207ENST00000509995 CNTN2Q02246 1040 aa13.08□□□□□ -0.32
SNF8-207ENST00000509995 DDX10Q13206 875 aaKnown RBP13.08□□□□□ -0.32
SNF8-207ENST00000509995 GPNMBQ14956 572 aa13.08□□□□□ -0.32
SNF8-207ENST00000509995 EPC2Q52LR7 807 aa13.08□□□□□ -0.32
SNF8-207ENST00000509995 FAM47CQ5HY64 1035 aa13.08□□□□□ -0.32
SNF8-207ENST00000509995 TTC39AQ5SRH9 613 aa13.08□□□□□ -0.32
SNF8-207ENST00000509995 FAM117BQ6P1L5 589 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms