RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 MSL3Q8N5Y2 521 aaKnown RBP10.21□□□□□ -0.77
PDLIM5-213ENST00000509357 LARP6Q9BRS8 491 aaKnown RBP10.21□□□□□ -0.77
PDLIM5-213ENST00000509357 AGXT2Q9BYV1 514 aa10.21□□□□□ -0.77
PDLIM5-213ENST00000509357 UPF3BQ9BZI7 483 aaKnown RBP10.21□□□□□ -0.77
PDLIM5-213ENST00000509357 ZSWIM6Q9HCJ5 1215 aa10.21□□□□□ -0.77
PDLIM5-213ENST00000509357 XPNPEP3Q9NQH7 507 aa10.21□□□□□ -0.77
PDLIM5-213ENST00000509357 ZMYND8Q9ULU4 1186 aaPredicted RBP10.21□□□□□ -0.77
PDLIM5-213ENST00000509357 COLQQ9Y215 455 aaPredicted RBP10.21□□□□□ -0.77
PDLIM5-213ENST00000509357 ZNF536O15090 1300 aa10.21□□□□□ -0.78
PDLIM5-213ENST00000509357 ERICH2A1L162 156 aa10.2□□□□□ -0.78
PDLIM5-213ENST00000509357 DNM1LO00429 736 aa10.2□□□□□ -0.78
PDLIM5-213ENST00000509357 IFIT3O14879 490 aaKnown RBP10.2□□□□□ -0.78
PDLIM5-213ENST00000509357 PFASO15067 1338 aa10.2□□□□□ -0.78
PDLIM5-213ENST00000509357 CYTH3O43739 400 aa10.2□□□□□ -0.78
PDLIM5-213ENST00000509357 IGHA2P01877 340 aa10.2□□□□□ -0.78
PDLIM5-213ENST00000509357 ICAM1P05362 532 aa10.2□□□□□ -0.78
PDLIM5-213ENST00000509357 AKR1A1P14550 325 aa10.2□□□□□ -0.78
PDLIM5-213ENST00000509357 MNX1P50219 401 aaPredicted RBP10.2□□□□□ -0.78
PDLIM5-213ENST00000509357 ZNF543Q08ER8 600 aa10.2□□□□□ -0.78
PDLIM5-213ENST00000509357 HABP4Q5JVS0 413 aaKnown RBP10.2□□□□□ -0.78
PDLIM5-213ENST00000509357 GPATCH4Q5T3I0 446 aaKnown RBP10.2□□□□□ -0.78
PDLIM5-213ENST00000509357 IFIT1BQ5T764 474 aaKnown RBP10.2□□□□□ -0.78
PDLIM5-213ENST00000509357 NOL8Q76FK4 1167 aaKnown RBP10.2□□□□□ -0.78
PDLIM5-213ENST00000509357 RALYLQ86SE5 291 aaKnown RBP10.2□□□□□ -0.78
PDLIM5-213ENST00000509357 PNMA1Q8ND90 353 aa10.2□□□□□ -0.78
PDLIM5-213ENST00000509357 FAM217BQ9NTX9 383 aaPredicted RBP10.2□□□□□ -0.78
PDLIM5-213ENST00000509357 MAD2L2Q9UI95 211 aa10.2□□□□□ -0.78
PDLIM5-213ENST00000509357 PLXNA1Q9UIW2 1896 aa10.2□□□□□ -0.78
PDLIM5-213ENST00000509357 FAM184BQ9ULE4 1060 aa10.2□□□□□ -0.78
PDLIM5-213ENST00000509357 ZNF236Q9UL36 1845 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 LRRC37A2A6NM11 1700 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 SYNGAP1Q96PV0 1343 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 DNAJC25-GNG10A0A024R161 153 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 PTPDC1A2A3K4 754 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 ASB14A6NK59 587 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 CD2BP2O95400 341 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 LARGE1O95461 756 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 PGK1P00558 417 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 PARP1P09874 1014 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 ZNF865P0CJ78 1059 aaPredicted RBP10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 COL6A1P12109 1028 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 SYN1P17600 705 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 CASTP20810 708 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 MCM5P33992 734 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 ADCYAP1R1P41586 468 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 CNTN2Q02246 1040 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 ST3GAL1Q11201 340 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 ACVR2BQ13705 512 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 LRRC26Q2I0M4 334 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 MUM1L1Q5H9M0 696 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 TMEM67Q5HYA8 995 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 BTNL9Q6UXG8 535 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 Q6ZUG5 572 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 ARMCX2Q7L311 632 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 DHX32Q7L7V1 743 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 ZNF467Q7Z7K2 595 aaPredicted RBP10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 RNF180Q86T96 592 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 FERMT2Q96AC1 680 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 UBA5Q9GZZ9 404 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 RANBP17Q9H2T7 1088 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 ABHD16BQ9H3Z7 469 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 VAT1LQ9HCJ6 419 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 A1CFQ9NQ94 594 aaKnown RBP10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 PRKAG2Q9UGJ0 569 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 PNMA2Q9UL42 364 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 CEP290O15078 2479 aa10.19□□□□□ -0.78
PDLIM5-213ENST00000509357 WDR19Q8NEZ3 1342 aa10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 PALM3A6NDB9 673 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 PPP1R11O60927 126 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 PLEKHA8P1O95397 391 aa10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 SNAI1O95863 264 aaPredicted RBP10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 CALML3P27482 149 aa10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 CDC27P30260 824 aa10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 LIFRP42702 1097 aa10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 RBM25P49756 843 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 APOBRQ0VD83 1088 aa10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 GRM4Q14833 912 aa10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 WTAPQ15007 396 aa10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 SART3Q15020 963 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 LRRC41Q15345 812 aa10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 RNF20Q5VTR2 975 aa10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 MAMDC4Q6UXC1 1216 aa10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 RUFY3Q7L099 469 aa10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 SGMS1Q86VZ5 419 aa10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 CCDC144CPQ8IYA2 1237 aa10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 ZNF654Q8IZM8 581 aa10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 CMTR1Q8N1G2 835 aaKnown RBP10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 TM6SF1Q9BZW5 370 aa10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 SPC25Q9HBM1 224 aa10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 CYP39A1Q9NYL5 469 aa10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 ATP11BQ9Y2G3 1177 aa10.18□□□□□ -0.78
PDLIM5-213ENST00000509357 NID2Q14112 1375 aa10.17□□□□□ -0.78
PDLIM5-213ENST00000509357 FUT2Q10981 343 aa10.17□□□□□ -0.78
PDLIM5-213ENST00000509357 BAATQ14032 418 aaPredicted RBP10.17□□□□□ -0.78
PDLIM5-213ENST00000509357 CCDC144BQ3MJ40 725 aa10.17□□□□□ -0.78
PDLIM5-213ENST00000509357 USH1GQ495M9 461 aa10.17□□□□□ -0.78
PDLIM5-213ENST00000509357 ASPRV1Q53RT3 343 aa10.17□□□□□ -0.78
PDLIM5-213ENST00000509357 APOA5Q6Q788 366 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms