RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 CWC22Q9HCG8 908 aaKnown RBP11.84□□□□□ -0.51
HTT-204ENST00000508321 RAVER2Q9HCJ3 691 aaKnown RBP11.84□□□□□ -0.51
HTT-204ENST00000508321 RNF146Q9NTX7 359 aa11.84□□□□□ -0.51
HTT-204ENST00000508321 MAP3K20Q9NYL2 800 aaKnown RBP11.84□□□□□ -0.51
HTT-204ENST00000508321 MRPL11Q9Y3B7 192 aaKnown RBP11.84□□□□□ -0.51
HTT-204ENST00000508321 ZSWIM8A7E2V4 1837 aa11.83□□□□□ -0.51
HTT-204ENST00000508321 SMCHD1A6NHR9 2005 aa11.83□□□□□ -0.52
HTT-204ENST00000508321 PTPDC1A2A3K4 754 aa11.83□□□□□ -0.52
HTT-204ENST00000508321 TNPO2O14787 897 aaKnown RBP11.83□□□□□ -0.52
HTT-204ENST00000508321 CD2BP2O95400 341 aaKnown RBP11.83□□□□□ -0.52
HTT-204ENST00000508321 HSPA8P11142 646 aaKnown RBP11.83□□□□□ -0.52
HTT-204ENST00000508321 XBP1P17861 261 aa11.83□□□□□ -0.52
HTT-204ENST00000508321 HOXD10P28358 340 aa11.83□□□□□ -0.52
HTT-204ENST00000508321 GHRHRQ02643 423 aa11.83□□□□□ -0.52
HTT-204ENST00000508321 GPR142Q7Z601 462 aa11.83□□□□□ -0.52
HTT-204ENST00000508321 PLEKHH3Q7Z736 793 aa11.83□□□□□ -0.52
HTT-204ENST00000508321 NCAPG2Q86XI2 1143 aa11.83□□□□□ -0.52
HTT-204ENST00000508321 MCF2L2Q86YR7 1114 aa11.83□□□□□ -0.52
HTT-204ENST00000508321 RGS22Q8NE09 1264 aa11.83□□□□□ -0.52
HTT-204ENST00000508321 ZNF296Q8WUU4 475 aaPredicted RBP11.83□□□□□ -0.52
HTT-204ENST00000508321 COA7Q96BR5 231 aa11.83□□□□□ -0.52
HTT-204ENST00000508321 AGBL1Q96MI9 1066 aa11.83□□□□□ -0.52
HTT-204ENST00000508321 VAT1LQ9HCJ6 419 aa11.83□□□□□ -0.52
HTT-204ENST00000508321 SH3GLB2Q9NR46 395 aa11.83□□□□□ -0.52
HTT-204ENST00000508321 BARHL2Q9NY43 387 aa11.83□□□□□ -0.52
HTT-204ENST00000508321 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.83□□□□□ -0.52
HTT-204ENST00000508321 PCDHA1Q9Y5I3 950 aa11.83□□□□□ -0.52
HTT-204ENST00000508321 ZNFX1Q9P2E3 1918 aaKnown RBP11.83□□□□□ -0.52
HTT-204ENST00000508321 LCTP09848 1927 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 ESYT2A0FGR8 921 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 SLC15A5A6NIM6 579 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 FCER1AP12319 257 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 ALAS1P13196 640 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 ST3GAL1Q11201 340 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 CUL4AQ13619 759 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 GRB14Q14449 540 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 BECN1Q14457 450 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 KCTD2Q14681 263 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 USH1GQ495M9 461 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 HEATR3Q7Z4Q2 680 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 CCDC83Q8IWF9 413 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 CMTR1Q8N1G2 835 aaKnown RBP11.82□□□□□ -0.52
HTT-204ENST00000508321 CCDC82Q8N4S0 544 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 NECAB1Q8N987 351 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 NSUN7Q8NE18 718 aaKnown RBP11.82□□□□□ -0.52
HTT-204ENST00000508321 SMARCC2Q8TAQ2 1214 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 PHKBQ93100 1093 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 INTS4Q96HW7 963 aaKnown RBP11.82□□□□□ -0.52
HTT-204ENST00000508321 TRERF1Q96PN7 1200 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 PORCNQ9H237 461 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 R3HDMLQ9H3Y0 253 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 SLC5A4Q9NY91 659 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 V9GY48 417 aaPredicted RBP11.82□□□□□ -0.52
HTT-204ENST00000508321 DOCK3Q8IZD9 2030 aa11.82□□□□□ -0.52
HTT-204ENST00000508321 LRRC37A2A6NM11 1700 aa11.81□□□□□ -0.52
HTT-204ENST00000508321 LOC102724159A0A0B4J2E5 919 aa11.81□□□□□ -0.52
HTT-204ENST00000508321 PPP1R11O60927 126 aaPredicted RBP11.81□□□□□ -0.52
HTT-204ENST00000508321 SLC34A2O95436 690 aa11.81□□□□□ -0.52
HTT-204ENST00000508321 CTDNEP1O95476 244 aa11.81□□□□□ -0.52
HTT-204ENST00000508321 PSMC4P43686 418 aa11.81□□□□□ -0.52
HTT-204ENST00000508321 PWP2Q15269 919 aaKnown RBP11.81□□□□□ -0.52
HTT-204ENST00000508321 Q3C1V9 767 aa11.81□□□□□ -0.52
HTT-204ENST00000508321 WDR78Q5VTH9 848 aa11.81□□□□□ -0.52
HTT-204ENST00000508321 WWC2Q6AWC2 1192 aa11.81□□□□□ -0.52
HTT-204ENST00000508321 GALNT17Q6IS24 598 aa11.81□□□□□ -0.52
HTT-204ENST00000508321 MMP19Q99542 508 aa11.81□□□□□ -0.52
HTT-204ENST00000508321 APBA2Q99767 749 aa11.81□□□□□ -0.52
HTT-204ENST00000508321 NUDT12Q9BQG2 462 aa11.81□□□□□ -0.52
HTT-204ENST00000508321 EFCC1Q9HA90 598 aa11.81□□□□□ -0.52
HTT-204ENST00000508321 HOMER2Q9NSB8 354 aa11.81□□□□□ -0.52
HTT-204ENST00000508321 ORC3Q9UBD5 711 aaPredicted RBP11.81□□□□□ -0.52
HTT-204ENST00000508321 STXBP3O00186 592 aa11.8□□□□□ -0.52
HTT-204ENST00000508321 PIK3CDO00329 1044 aa11.8□□□□□ -0.52
HTT-204ENST00000508321 HOXC6P09630 235 aa11.8□□□□□ -0.52
HTT-204ENST00000508321 PTPREP23469 700 aa11.8□□□□□ -0.52
HTT-204ENST00000508321 CALML3P27482 149 aa11.8□□□□□ -0.52
HTT-204ENST00000508321 GNA11P29992 359 aa11.8□□□□□ -0.52
HTT-204ENST00000508321 RGS2P41220 211 aa11.8□□□□□ -0.52
HTT-204ENST00000508321 NAPAP54920 295 aa11.8□□□□□ -0.52
HTT-204ENST00000508321 SNAP25P60880 206 aa11.8□□□□□ -0.52
HTT-204ENST00000508321 PKN1Q16512 942 aa11.8□□□□□ -0.52
HTT-204ENST00000508321 MCTP2Q6DN12 878 aa11.8□□□□□ -0.52
HTT-204ENST00000508321 RNF207Q6ZRF8 634 aa11.8□□□□□ -0.52
HTT-204ENST00000508321 TRMT44Q8IYL2 757 aaKnown RBP11.8□□□□□ -0.52
HTT-204ENST00000508321 ANKRD35Q8N283 1001 aa11.8□□□□□ -0.52
HTT-204ENST00000508321 CD99L2Q8TCZ2 262 aa11.8□□□□□ -0.52
HTT-204ENST00000508321 BICD2Q8TD16 824 aa11.8□□□□□ -0.52
HTT-204ENST00000508321 CLEC4DQ8WXI8 215 aa11.8□□□□□ -0.52
HTT-204ENST00000508321 CUL5Q93034 780 aa11.8□□□□□ -0.52
HTT-204ENST00000508321 TRIM47Q96LD4 638 aa11.8□□□□□ -0.52
HTT-204ENST00000508321 MPHOSPH6Q99547 160 aaKnown RBP11.8□□□□□ -0.52
HTT-204ENST00000508321 A1CFQ9NQ94 594 aaKnown RBP11.8□□□□□ -0.52
HTT-204ENST00000508321 TSKSQ9UJT2 592 aa11.8□□□□□ -0.52
HTT-204ENST00000508321 DIS3Q9Y2L1 958 aaKnown RBP11.8□□□□□ -0.52
HTT-204ENST00000508321 RIPK3Q9Y572 518 aa11.8□□□□□ -0.52
HTT-204ENST00000508321 NFIBO00712 420 aa11.79□□□□□ -0.52
HTT-204ENST00000508321 XRCC5P13010 732 aaKnown RBP11.79□□□□□ -0.52
HTT-204ENST00000508321 ADORA2AP29274 412 aa11.79□□□□□ -0.52
HTT-204ENST00000508321 ANP32AP39687 249 aaKnown RBP11.79□□□□□ -0.52
HTT-204ENST00000508321 HSD17B4P51659 736 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms