RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 USP17L10C9JJH3 530 aa19.94■□□□□ 0.78
SFXN1-208ENST00000507823 CCDC96Q2M329 555 aa19.94■□□□□ 0.78
SFXN1-208ENST00000507823 MYRIPQ8NFW9 859 aa19.94■□□□□ 0.78
SFXN1-208ENST00000507823 STAMQ92783 540 aa19.94■□□□□ 0.78
SFXN1-208ENST00000507823 SPDYE2BA6NHP3 402 aa19.93■□□□□ 0.78
SFXN1-208ENST00000507823 TMEM232C9JQI7 657 aa19.93■□□□□ 0.78
SFXN1-208ENST00000507823 SPDYE6P0CI01 402 aa19.93■□□□□ 0.78
SFXN1-208ENST00000507823 NR1I3Q14994 352 aa19.93■□□□□ 0.78
SFXN1-208ENST00000507823 LRRC15Q8TF66 581 aa19.93■□□□□ 0.78
SFXN1-208ENST00000507823 RWDD2AQ9UIY3 292 aa19.93■□□□□ 0.78
SFXN1-208ENST00000507823 ATF5Q9Y2D1 282 aaPredicted RBP19.93■□□□□ 0.78
SFXN1-208ENST00000507823 FAM196BA6NMK8 535 aa19.93■□□□□ 0.78
SFXN1-208ENST00000507823 KLRC4O43908 158 aa19.93■□□□□ 0.78
SFXN1-208ENST00000507823 GTF2F1P35269 517 aaKnown RBP eCLIP19.93■□□□□ 0.789e-7■■■■□ 24.5
SFXN1-208ENST00000507823 BAG6P46379 1132 aa19.93■□□□□ 0.78
SFXN1-208ENST00000507823 SEPT2Q15019 361 aa19.93■□□□□ 0.78
SFXN1-208ENST00000507823 SLFN13Q68D06 897 aa19.93■□□□□ 0.78
SFXN1-208ENST00000507823 KCTD1Q719H9 257 aa19.93■□□□□ 0.78
SFXN1-208ENST00000507823 CABP7Q86V35 215 aa19.93■□□□□ 0.78
SFXN1-208ENST00000507823 ZSCAN29Q8IWY8 852 aaPredicted RBP19.93■□□□□ 0.78
SFXN1-208ENST00000507823 CUL5Q93034 780 aa19.93■□□□□ 0.78
SFXN1-208ENST00000507823 MRPL12P52815 198 aaKnown RBP19.92■□□□□ 0.78
SFXN1-208ENST00000507823 ICA1Q05084 483 aa19.92■□□□□ 0.78
SFXN1-208ENST00000507823 ABCB5Q2M3G0 1257 aa19.92■□□□□ 0.78
SFXN1-208ENST00000507823 SHROOM1Q2M3G4 852 aaPredicted RBP19.92■□□□□ 0.78
SFXN1-208ENST00000507823 MMTAG2Q9BU76 263 aaKnown RBP19.92■□□□□ 0.78
SFXN1-208ENST00000507823 HERC5Q9UII4 1024 aaKnown RBP19.92■□□□□ 0.78
SFXN1-208ENST00000507823 NYAP1Q6ZVC0 841 aa19.92■□□□□ 0.78
SFXN1-208ENST00000507823 POTEDQ86YR6 584 aa19.92■□□□□ 0.78
SFXN1-208ENST00000507823 CCDC112Q8NEF3 446 aa19.92■□□□□ 0.78
SFXN1-208ENST00000507823 TRIM34Q9BYJ4 488 aa19.92■□□□□ 0.78
SFXN1-208ENST00000507823 SLC16A2P36021 539 aa19.91■□□□□ 0.78
SFXN1-208ENST00000507823 PDIA5Q14554 519 aa19.91■□□□□ 0.78
SFXN1-208ENST00000507823 CCAR2Q8N163 923 aaKnown RBP19.91■□□□□ 0.78
SFXN1-208ENST00000507823 MTMR14Q8NCE2 650 aa19.91■□□□□ 0.78
SFXN1-208ENST00000507823 MYH7BA7E2Y1 1941 aa19.91■□□□□ 0.78
SFXN1-208ENST00000507823 RHOBTB3O94955 611 aa19.91■□□□□ 0.78
SFXN1-208ENST00000507823 SLC1A4P43007 532 aa19.91■□□□□ 0.78
SFXN1-208ENST00000507823 ATP2B2Q01814 1243 aa19.91■□□□□ 0.78
SFXN1-208ENST00000507823 FKBP1CQ5VVH2 108 aa19.91■□□□□ 0.78
SFXN1-208ENST00000507823 SMYD4Q8IYR2 804 aaPredicted RBP19.91■□□□□ 0.78
SFXN1-208ENST00000507823 PSDA5PKW4 1024 aaPredicted RBP19.9■□□□□ 0.78
SFXN1-208ENST00000507823 LRRC10BA6NIK2 292 aa19.9■□□□□ 0.78
SFXN1-208ENST00000507823 DPEP1P16444 411 aa19.9■□□□□ 0.78
SFXN1-208ENST00000507823 CDK11BP21127 795 aaKnown RBP19.9■□□□□ 0.78
SFXN1-208ENST00000507823 QRICH1Q2TAL8 776 aa19.9■□□□□ 0.78
SFXN1-208ENST00000507823 BTNL9Q6UXG8 535 aa19.9■□□□□ 0.78
SFXN1-208ENST00000507823 UQCRHLA0A096LP55 91 aa19.9■□□□□ 0.78
SFXN1-208ENST00000507823 UQCRHP07919 91 aa19.9■□□□□ 0.78
SFXN1-208ENST00000507823 GCFC2P16383 781 aaKnown RBP19.9■□□□□ 0.78
SFXN1-208ENST00000507823 PLCG1P19174 1290 aa19.9■□□□□ 0.78
SFXN1-208ENST00000507823 PBX1P40424 430 aa19.9■□□□□ 0.78
SFXN1-208ENST00000507823 CALCRLQ16602 461 aa19.9■□□□□ 0.78
SFXN1-208ENST00000507823 CTAGE1Q96RT6 745 aa19.9■□□□□ 0.78
SFXN1-208ENST00000507823 NAP1L4Q99733 375 aaKnown RBP19.9■□□□□ 0.78
SFXN1-208ENST00000507823 C7orf25Q9BPX7 421 aa19.9■□□□□ 0.78
SFXN1-208ENST00000507823 GTPBP4Q9BZE4 634 aaKnown RBP19.9■□□□□ 0.78
SFXN1-208ENST00000507823 PSMD14O00487 310 aa19.89■□□□□ 0.78
SFXN1-208ENST00000507823 JAG1P78504 1218 aa19.89■□□□□ 0.78
SFXN1-208ENST00000507823 RRP1BQ14684 758 aaKnown RBP19.89■□□□□ 0.78
SFXN1-208ENST00000507823 SPECC1LQ69YQ0 1117 aa19.89■□□□□ 0.78
SFXN1-208ENST00000507823 ADSSL1Q8N142 457 aa19.89■□□□□ 0.78
SFXN1-208ENST00000507823 FAM151AQ8WW52 585 aa19.89■□□□□ 0.78
SFXN1-208ENST00000507823 PSTPIP2Q9H939 334 aa19.89■□□□□ 0.78
SFXN1-208ENST00000507823 ADD3Q9UEY8 706 aaKnown RBP19.89■□□□□ 0.78
SFXN1-208ENST00000507823 F5H6K3 240 aa19.89■□□□□ 0.77
SFXN1-208ENST00000507823 SLC37A4O43826 429 aa19.89■□□□□ 0.77
SFXN1-208ENST00000507823 NRDCO43847 1150 aa19.89■□□□□ 0.77
SFXN1-208ENST00000507823 KLRC3Q07444 240 aa19.89■□□□□ 0.77
SFXN1-208ENST00000507823 PAK1Q13153 545 aa19.89■□□□□ 0.77
SFXN1-208ENST00000507823 LIMA1Q9UHB6 759 aaKnown RBP19.89■□□□□ 0.77
SFXN1-208ENST00000507823 CTNND2Q9UQB3 1225 aa19.89■□□□□ 0.77
SFXN1-208ENST00000507823 DYNC1I1O14576 645 aa19.89■□□□□ 0.77
SFXN1-208ENST00000507823 TDP2O95551 362 aa19.89■□□□□ 0.77
SFXN1-208ENST00000507823 MMP14P50281 582 aa19.89■□□□□ 0.77
SFXN1-208ENST00000507823 SPDYE2Q495Y8 402 aa19.89■□□□□ 0.77
SFXN1-208ENST00000507823 RBM26Q5T8P6 1007 aaKnown RBP19.89■□□□□ 0.77
SFXN1-208ENST00000507823 E4F1Q66K89 784 aaPredicted RBP19.89■□□□□ 0.77
SFXN1-208ENST00000507823 KLHL10Q6JEL2 608 aa19.89■□□□□ 0.77
SFXN1-208ENST00000507823 GIMAP8Q8ND71 665 aaPredicted RBP19.89■□□□□ 0.77
SFXN1-208ENST00000507823 MBOAT7Q96N66 472 aa19.89■□□□□ 0.77
SFXN1-208ENST00000507823 CSRNP1Q96S65 589 aa19.89■□□□□ 0.77
SFXN1-208ENST00000507823 HDAC9Q9UKV0 1011 aa19.89■□□□□ 0.77
SFXN1-208ENST00000507823 USP27XA6NNY8 438 aa19.88■□□□□ 0.77
SFXN1-208ENST00000507823 NDUFB10O96000 172 aa19.88■□□□□ 0.77
SFXN1-208ENST00000507823 TECP42680 631 aa19.88■□□□□ 0.77
SFXN1-208ENST00000507823 CDC37Q16543 378 aaPredicted RBP19.88■□□□□ 0.77
SFXN1-208ENST00000507823 TPD52L1Q16890 204 aaPredicted RBP19.88■□□□□ 0.77
SFXN1-208ENST00000507823 KMT5BQ4FZB7 885 aa19.88■□□□□ 0.77
SFXN1-208ENST00000507823 COBLL1Q53SF7 1204 aa19.88■□□□□ 0.77
SFXN1-208ENST00000507823 MCTP2Q6DN12 878 aa19.88■□□□□ 0.77
SFXN1-208ENST00000507823 TMEM139Q8IV31 216 aa19.88■□□□□ 0.77
SFXN1-208ENST00000507823 TEX2Q8IWB9 1127 aa19.88■□□□□ 0.77
SFXN1-208ENST00000507823 LARGE2Q8N3Y3 721 aa19.88■□□□□ 0.77
SFXN1-208ENST00000507823 TMOD2Q9NZR1 351 aa19.88■□□□□ 0.77
SFXN1-208ENST00000507823 ZNF70Q9UC06 446 aaPredicted RBP19.88■□□□□ 0.77
SFXN1-208ENST00000507823 STK17AQ9UEE5 414 aa19.88■□□□□ 0.77
SFXN1-208ENST00000507823 CNTNAP1P78357 1384 aa19.88■□□□□ 0.77
SFXN1-208ENST00000507823 GDF11O95390 407 aa19.88■□□□□ 0.77
SFXN1-208ENST00000507823 STX17P56962 302 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms