RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 HMGB1P09429 215 aaKnown RBP18.19■□□□□ 0.5
COL1A1-211ENST00000507689 CALM1P0DP23 149 aa18.19■□□□□ 0.5
COL1A1-211ENST00000507689 CALM2P0DP24 149 aa18.19■□□□□ 0.5
COL1A1-211ENST00000507689 CALM3P0DP25 149 aa18.19■□□□□ 0.5
COL1A1-211ENST00000507689 MUM1L1Q5H9M0 696 aa18.19■□□□□ 0.5
COL1A1-211ENST00000507689 RNF207Q6ZRF8 634 aa18.19■□□□□ 0.5
COL1A1-211ENST00000507689 FBXO11Q86XK2 927 aa18.19■□□□□ 0.5
COL1A1-211ENST00000507689 TRPV1Q8NER1 839 aa18.19■□□□□ 0.5
COL1A1-211ENST00000507689 NEK1Q96PY6 1258 aa18.19■□□□□ 0.5
COL1A1-211ENST00000507689 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.19■□□□□ 0.5
COL1A1-211ENST00000507689 CYP39A1Q9NYL5 469 aa18.19■□□□□ 0.5
COL1A1-211ENST00000507689 MRPL11Q9Y3B7 192 aaKnown RBP18.19■□□□□ 0.5
COL1A1-211ENST00000507689 ZNFX1Q9P2E3 1918 aaKnown RBP18.18■□□□□ 0.5
COL1A1-211ENST00000507689 DNM1LO00429 736 aa18.18■□□□□ 0.5
COL1A1-211ENST00000507689 DDAH1O94760 285 aa18.18■□□□□ 0.5
COL1A1-211ENST00000507689 CALML3P27482 149 aa18.18■□□□□ 0.5
COL1A1-211ENST00000507689 GNAQP50148 359 aa18.18■□□□□ 0.5
COL1A1-211ENST00000507689 CNTN2Q02246 1040 aa18.18■□□□□ 0.5
COL1A1-211ENST00000507689 GRM4Q14833 912 aa18.18■□□□□ 0.5
COL1A1-211ENST00000507689 ANO1Q5XXA6 986 aa18.18■□□□□ 0.5
COL1A1-211ENST00000507689 NOL8Q76FK4 1167 aaKnown RBP18.18■□□□□ 0.5
COL1A1-211ENST00000507689 ARMCX2Q7L311 632 aa18.18■□□□□ 0.5
COL1A1-211ENST00000507689 UBE2Q1Q7Z7E8 422 aa18.18■□□□□ 0.5
COL1A1-211ENST00000507689 RNF180Q86T96 592 aa18.18■□□□□ 0.5
COL1A1-211ENST00000507689 FAM133AQ8N9E0 248 aa18.18■□□□□ 0.5
COL1A1-211ENST00000507689 AMNQ9BXJ7 453 aa18.18■□□□□ 0.5
COL1A1-211ENST00000507689 MAF1Q9H063 256 aa18.18■□□□□ 0.5
COL1A1-211ENST00000507689 XPNPEP3Q9NQH7 507 aa18.18■□□□□ 0.5
COL1A1-211ENST00000507689 SLC12A7Q9Y666 1083 aa18.18■□□□□ 0.5
COL1A1-211ENST00000507689 TAF6LQ9Y6J9 622 aa18.18■□□□□ 0.5
COL1A1-211ENST00000507689 EIF5BO60841 1220 aaKnown RBP18.17■□□□□ 0.5
COL1A1-211ENST00000507689 IGHA2P01877 340 aa18.17■□□□□ 0.5
COL1A1-211ENST00000507689 ACVR2BQ13705 512 aa18.17■□□□□ 0.5
COL1A1-211ENST00000507689 BAATQ14032 418 aaPredicted RBP18.17■□□□□ 0.5
COL1A1-211ENST00000507689 CCDC144CPQ8IYA2 1237 aa18.17■□□□□ 0.5
COL1A1-211ENST00000507689 ZNF654Q8IZM8 581 aa18.17■□□□□ 0.5
COL1A1-211ENST00000507689 IGDCC4Q8TDY8 1250 aa18.17■□□□□ 0.5
COL1A1-211ENST00000507689 DIS3LQ8TF46 1054 aaKnown RBP18.17■□□□□ 0.5
COL1A1-211ENST00000507689 LZTS2Q9BRK4 669 aa18.17■□□□□ 0.5
COL1A1-211ENST00000507689 CPVLQ9H3G5 476 aa18.17■□□□□ 0.5
COL1A1-211ENST00000507689 MAD2L2Q9UI95 211 aa18.17■□□□□ 0.5
COL1A1-211ENST00000507689 PLXNA1Q9UIW2 1896 aa18.16■□□□□ 0.5
COL1A1-211ENST00000507689 LOC102724159A0A0B4J2E5 919 aa18.16■□□□□ 0.5
COL1A1-211ENST00000507689 PALM3A6NDB9 673 aaPredicted RBP18.16■□□□□ 0.5
COL1A1-211ENST00000507689 NFIBO00712 420 aa18.16■□□□□ 0.5
COL1A1-211ENST00000507689 LIFRP42702 1097 aa18.16■□□□□ 0.5
COL1A1-211ENST00000507689 ANTXR2P58335 489 aa18.16■□□□□ 0.5
COL1A1-211ENST00000507689 PWP2Q15269 919 aaKnown RBP18.16■□□□□ 0.5
COL1A1-211ENST00000507689 QRICH1Q2TAL8 776 aa18.16■□□□□ 0.5
COL1A1-211ENST00000507689 HOMER1Q86YM7 354 aa18.16■□□□□ 0.5
COL1A1-211ENST00000507689 STAG2Q8N3U4 1231 aa18.16■□□□□ 0.5
COL1A1-211ENST00000507689 MAP3K14Q99558 947 aa18.16■□□□□ 0.5
COL1A1-211ENST00000507689 SENP6Q9GZR1 1112 aaPredicted RBP18.16■□□□□ 0.5
COL1A1-211ENST00000507689 JMJD4Q9H9V9 463 aa18.16■□□□□ 0.5
COL1A1-211ENST00000507689 LY9Q9HBG7 655 aa18.16■□□□□ 0.5
COL1A1-211ENST00000507689 SEC63Q9UGP8 760 aaKnown RBP18.16■□□□□ 0.5
COL1A1-211ENST00000507689 ZBTB5O15062 677 aa18.15■□□□□ 0.5
COL1A1-211ENST00000507689 SNAI1O95863 264 aaPredicted RBP18.15■□□□□ 0.5
COL1A1-211ENST00000507689 ZNF865P0CJ78 1059 aaPredicted RBP18.15■□□□□ 0.5
COL1A1-211ENST00000507689 GJC2Q5T442 439 aaPredicted RBP18.15■□□□□ 0.5
COL1A1-211ENST00000507689 RGS22Q8NE09 1264 aa18.15■□□□□ 0.5
COL1A1-211ENST00000507689 CENPFP49454 3210 aa18.14■□□□□ 0.49
COL1A1-211ENST00000507689 SOWAHBA6NEL2 793 aa18.14■□□□□ 0.49
COL1A1-211ENST00000507689 SH2B2O14492 632 aaPredicted RBP18.14■□□□□ 0.49
COL1A1-211ENST00000507689 TAL1P17542 331 aaPredicted RBP18.14■□□□□ 0.49
COL1A1-211ENST00000507689 PSMA5P28066 241 aa18.14■□□□□ 0.49
COL1A1-211ENST00000507689 RPS6P62753 249 aaKnown RBP18.14■□□□□ 0.49
COL1A1-211ENST00000507689 PDE4DQ08499 809 aa18.14■□□□□ 0.49
COL1A1-211ENST00000507689 TROAPQ12815 778 aa18.14■□□□□ 0.49
COL1A1-211ENST00000507689 TSGA10IPQ3SY00 556 aa18.14■□□□□ 0.49
COL1A1-211ENST00000507689 DHX32Q7L7V1 743 aaKnown RBP18.14■□□□□ 0.49
COL1A1-211ENST00000507689 DNERQ8NFT8 737 aa18.14■□□□□ 0.49
COL1A1-211ENST00000507689 RRP36Q96EU6 259 aaKnown RBP18.14■□□□□ 0.49
COL1A1-211ENST00000507689 PCDHA1Q9Y5I3 950 aa18.14■□□□□ 0.49
COL1A1-211ENST00000507689 DUSP11O75319 330 aaKnown RBP18.13■□□□□ 0.49
COL1A1-211ENST00000507689 ALDH5A1P51649 535 aaPredicted RBP18.13■□□□□ 0.49
COL1A1-211ENST00000507689 CCDC144BQ3MJ40 725 aa18.13■□□□□ 0.49
COL1A1-211ENST00000507689 CLEC4DQ8WXI8 215 aa18.13■□□□□ 0.49
COL1A1-211ENST00000507689 AP5M1Q9H0R1 490 aa18.13■□□□□ 0.49
COL1A1-211ENST00000507689 VTA1Q9NP79 307 aa18.13■□□□□ 0.49
COL1A1-211ENST00000507689 NAP1L2Q9ULW6 460 aaPredicted RBP18.13■□□□□ 0.49
COL1A1-211ENST00000507689 PNMA6FA0A0J9YX94 578 aa18.12■□□□□ 0.49
COL1A1-211ENST00000507689 EPB41L2O43491 1005 aaKnown RBP18.12■□□□□ 0.49
COL1A1-211ENST00000507689 TNFAIP2Q03169 654 aa18.12■□□□□ 0.49
COL1A1-211ENST00000507689 LRRC41Q15345 812 aa18.12■□□□□ 0.49
COL1A1-211ENST00000507689 SLC30A10Q6XR72 485 aa18.12■□□□□ 0.49
COL1A1-211ENST00000507689 C7orf61Q8IZ16 206 aa18.12■□□□□ 0.49
COL1A1-211ENST00000507689 MYL10Q9BUA6 226 aa18.12■□□□□ 0.49
COL1A1-211ENST00000507689 LRRC2Q9BYS8 371 aa18.12■□□□□ 0.49
COL1A1-211ENST00000507689 SENP2Q9HC62 589 aa18.12■□□□□ 0.49
COL1A1-211ENST00000507689 PRKAG2Q9UGJ0 569 aa18.12■□□□□ 0.49
COL1A1-211ENST00000507689 H0YGN5 161 aa18.11■□□□□ 0.49
COL1A1-211ENST00000507689 ZEB2O60315 1214 aa18.11■□□□□ 0.49
COL1A1-211ENST00000507689 PGK1P00558 417 aa18.11■□□□□ 0.49
COL1A1-211ENST00000507689 CFBP00751 764 aa18.11■□□□□ 0.49
COL1A1-211ENST00000507689 C6orf222P0C671 652 aaPredicted RBP18.11■□□□□ 0.49
COL1A1-211ENST00000507689 SMARCA1P28370 1054 aa18.11■□□□□ 0.49
COL1A1-211ENST00000507689 IQSEC1Q6DN90 963 aa18.11■□□□□ 0.49
COL1A1-211ENST00000507689 BLOC1S2Q6QNY1 142 aa18.11■□□□□ 0.49
COL1A1-211ENST00000507689 EEPD1Q7L9B9 569 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms