RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 ACVR2BQ13705 512 aa12.56□□□□□ -0.4
CPNE4-206ENST00000505957 ALX1Q15699 326 aa12.56□□□□□ -0.4
CPNE4-206ENST00000505957 SLFNL1Q499Z3 407 aa12.56□□□□□ -0.4
CPNE4-206ENST00000505957 TMEM240Q5SV17 173 aa12.56□□□□□ -0.4
CPNE4-206ENST00000505957 SNRNP48Q6IEG0 339 aaKnown RBP12.56□□□□□ -0.4
CPNE4-206ENST00000505957 C16orf59Q7L2K0 433 aa12.56□□□□□ -0.4
CPNE4-206ENST00000505957 TMEM199Q8N511 208 aa12.56□□□□□ -0.4
CPNE4-206ENST00000505957 ATXN2LQ8WWM7 1075 aaKnown RBP12.56□□□□□ -0.4
CPNE4-206ENST00000505957 JAKMIP1Q96N16 626 aaKnown RBP12.56□□□□□ -0.4
CPNE4-206ENST00000505957 GAS2L1Q99501 681 aaPredicted RBP12.56□□□□□ -0.4
CPNE4-206ENST00000505957 UPF3BQ9BZI7 483 aaKnown RBP12.56□□□□□ -0.4
CPNE4-206ENST00000505957 PUS7LQ9H0K6 701 aaKnown RBP12.56□□□□□ -0.4
CPNE4-206ENST00000505957 UPF3AQ9H1J1 476 aaKnown RBP12.56□□□□□ -0.4
CPNE4-206ENST00000505957 ABHD16BQ9H3Z7 469 aa12.56□□□□□ -0.4
CPNE4-206ENST00000505957 SPC25Q9HBM1 224 aa12.56□□□□□ -0.4
CPNE4-206ENST00000505957 ARPP21Q9UBL0 812 aaPredicted RBP12.56□□□□□ -0.4
CPNE4-206ENST00000505957 ZHX1Q9UKY1 873 aaPredicted RBP12.56□□□□□ -0.4
CPNE4-206ENST00000505957 SLC4A4Q9Y6R1 1079 aa12.56□□□□□ -0.4
CPNE4-206ENST00000505957 EYSQ5T1H1 3165 aa12.56□□□□□ -0.4
CPNE4-206ENST00000505957 A0A0U1RQG5 324 aaPredicted RBP12.55□□□□□ -0.4
CPNE4-206ENST00000505957 MYADML2A6NDP7 307 aa12.55□□□□□ -0.4
CPNE4-206ENST00000505957 F5H6K3 240 aa12.55□□□□□ -0.4
CPNE4-206ENST00000505957 ARVCFO00192 962 aa12.55□□□□□ -0.4
CPNE4-206ENST00000505957 FOXP2O15409 715 aa12.55□□□□□ -0.4
CPNE4-206ENST00000505957 ASGR1P07306 291 aa12.55□□□□□ -0.4
CPNE4-206ENST00000505957 CYP21A2P08686 494 aa12.55□□□□□ -0.4
CPNE4-206ENST00000505957 RPS6KB1P23443 525 aa12.55□□□□□ -0.4
CPNE4-206ENST00000505957 KLRC3Q07444 240 aa12.55□□□□□ -0.4
CPNE4-206ENST00000505957 ANKRD1Q15327 319 aa12.55□□□□□ -0.4
CPNE4-206ENST00000505957 ADCK5Q3MIX3 580 aa12.55□□□□□ -0.4
CPNE4-206ENST00000505957 SBK1Q52WX2 424 aa12.55□□□□□ -0.4
CPNE4-206ENST00000505957 PSRC1Q6PGN9 363 aaPredicted RBP12.55□□□□□ -0.4
CPNE4-206ENST00000505957 BLOC1S2Q6QNY1 142 aa12.55□□□□□ -0.4
CPNE4-206ENST00000505957 FBXL16Q8N461 479 aa12.55□□□□□ -0.4
CPNE4-206ENST00000505957 ZSCAN31Q96LW9 406 aaPredicted RBP12.55□□□□□ -0.4
CPNE4-206ENST00000505957 PBX4Q9BYU1 374 aa12.55□□□□□ -0.4
CPNE4-206ENST00000505957 SH2B1Q9NRF2 756 aaPredicted RBP12.55□□□□□ -0.4
CPNE4-206ENST00000505957 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.55□□□□□ -0.4
CPNE4-206ENST00000505957 FBXO40Q9UH90 709 aa12.55□□□□□ -0.4
CPNE4-206ENST00000505957 LIMCH1Q9UPQ0 1083 aa12.55□□□□□ -0.4
CPNE4-206ENST00000505957 RIPK3Q9Y572 518 aa12.55□□□□□ -0.4
CPNE4-206ENST00000505957 PRUNE2Q8WUY3 3088 aa12.55□□□□□ -0.4
CPNE4-206ENST00000505957 TLR3O15455 904 aaKnown RBP12.54□□□□□ -0.4
CPNE4-206ENST00000505957 RAD21O60216 631 aa12.54□□□□□ -0.4
CPNE4-206ENST00000505957 ZBED4O75132 1171 aa12.54□□□□□ -0.4
CPNE4-206ENST00000505957 HSP90AA1P07900 732 aaKnown RBP12.54□□□□□ -0.4
CPNE4-206ENST00000505957 C6orf222P0C671 652 aaPredicted RBP12.54□□□□□ -0.4
CPNE4-206ENST00000505957 GNAT2P19087 354 aa12.54□□□□□ -0.4
CPNE4-206ENST00000505957 OAZ1P54368 228 aa12.54□□□□□ -0.4
CPNE4-206ENST00000505957 GIMAP6Q6P9H5 292 aa12.54□□□□□ -0.4
CPNE4-206ENST00000505957 FAM126BQ8IXS8 530 aa12.54□□□□□ -0.4
CPNE4-206ENST00000505957 CHST13Q8NET6 341 aa12.54□□□□□ -0.4
CPNE4-206ENST00000505957 SLC38A10Q9HBR0 1119 aa12.54□□□□□ -0.4
CPNE4-206ENST00000505957 PDRG1Q9NUG6 133 aa12.54□□□□□ -0.4
CPNE4-206ENST00000505957 SYNPO2Q9UMS6 1093 aa12.54□□□□□ -0.4
CPNE4-206ENST00000505957 COL11A1P12107 1806 aaPredicted RBP12.53□□□□□ -0.4
CPNE4-206ENST00000505957 LAMA4Q16363 1823 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 PLXNA1Q9UIW2 1896 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 MYH8P13535 1937 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 ADCY6O43306 1168 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 NDUFB10O96000 172 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 CD4P01730 458 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 CSF2RAP15509 400 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 RASA1P20936 1047 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 PBX2P40425 430 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 AK2P54819 239 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 RAB30Q15771 203 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 CCDC144BQ3MJ40 725 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 GNASQ5JWF2 1037 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 ZNF365Q70YC5 407 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 ANKRD35Q8N283 1001 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 HERVK_113Q902F9 699 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 MKL1Q969V6 931 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 VTI1AQ96AJ9 217 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 FGD4Q96M96 766 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 NEK1Q96PY6 1258 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 STRBPQ96SI9 672 aaKnown RBP12.53□□□□□ -0.4
CPNE4-206ENST00000505957 NUP88Q99567 741 aaPredicted RBP12.53□□□□□ -0.4
CPNE4-206ENST00000505957 SEZ6LQ9BYH1 1024 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 CTDP1Q9Y5B0 961 aaPredicted RBP12.53□□□□□ -0.4
CPNE4-206ENST00000505957 WDR19Q8NEZ3 1342 aa12.53□□□□□ -0.4
CPNE4-206ENST00000505957 GREB1LQ9C091 1923 aaPredicted RBP12.52□□□□□ -0.4
CPNE4-206ENST00000505957 IGKV6D-41A0A0C4DH26 115 aa12.52□□□□□ -0.41
CPNE4-206ENST00000505957 GRXCR1A8MXD5 290 aa12.52□□□□□ -0.41
CPNE4-206ENST00000505957 CTAGE5O15320 804 aa12.52□□□□□ -0.41
CPNE4-206ENST00000505957 CABYRO75952 493 aa12.52□□□□□ -0.41
CPNE4-206ENST00000505957 FDX1P10109 184 aa12.52□□□□□ -0.41
CPNE4-206ENST00000505957 COL9A1P20849 921 aa12.52□□□□□ -0.41
CPNE4-206ENST00000505957 IRX5P78411 483 aaPredicted RBP12.52□□□□□ -0.41
CPNE4-206ENST00000505957 NUCB2P80303 420 aa12.52□□□□□ -0.41
CPNE4-206ENST00000505957 IMMTQ16891 758 aaKnown RBP12.52□□□□□ -0.41
CPNE4-206ENST00000505957 ARMCX2Q7L311 632 aa12.52□□□□□ -0.41
CPNE4-206ENST00000505957 CPXCR1Q8N123 301 aa12.52□□□□□ -0.41
CPNE4-206ENST00000505957 SLC43A3Q8NBI5 491 aa12.52□□□□□ -0.41
CPNE4-206ENST00000505957 ASB2Q96Q27 587 aa12.52□□□□□ -0.41
CPNE4-206ENST00000505957 AGXT2Q9BYV1 514 aa12.52□□□□□ -0.41
CPNE4-206ENST00000505957 KATNBL1Q9H079 304 aa12.52□□□□□ -0.41
CPNE4-206ENST00000505957 MTIF3Q9H2K0 278 aaKnown RBP12.52□□□□□ -0.41
CPNE4-206ENST00000505957 PRDM12Q9H4Q4 367 aa12.52□□□□□ -0.41
CPNE4-206ENST00000505957 MKNK2Q9HBH9 465 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms