RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 C11orf49Q9H6J7 331 aa13.3□□□□□ -0.28
KDM3B-203ENST00000505756 UPF2Q9HAU5 1272 aaKnown RBP13.3□□□□□ -0.28
KDM3B-203ENST00000505756 SENP2Q9HC62 589 aa13.3□□□□□ -0.28
KDM3B-203ENST00000505756 MAD2L2Q9UI95 211 aa13.3□□□□□ -0.28
KDM3B-203ENST00000505756 FRMPD3Q5JV73 1810 aa13.29□□□□□ -0.28
KDM3B-203ENST00000505756 DHX16O60231 1041 aaKnown RBP13.29□□□□□ -0.28
KDM3B-203ENST00000505756 SNAI1O95863 264 aaPredicted RBP13.29□□□□□ -0.28
KDM3B-203ENST00000505756 ZNF865P0CJ78 1059 aaPredicted RBP13.29□□□□□ -0.28
KDM3B-203ENST00000505756 TAL1P17542 331 aaPredicted RBP13.29□□□□□ -0.28
KDM3B-203ENST00000505756 TROAPQ12815 778 aa13.29□□□□□ -0.28
KDM3B-203ENST00000505756 TSGA10IPQ3SY00 556 aa13.29□□□□□ -0.28
KDM3B-203ENST00000505756 ARMCX2Q7L311 632 aa13.29□□□□□ -0.28
KDM3B-203ENST00000505756 TMTC2Q8N394 836 aa13.29□□□□□ -0.28
KDM3B-203ENST00000505756 STAG2Q8N3U4 1231 aa13.29□□□□□ -0.28
KDM3B-203ENST00000505756 CLEC4DQ8WXI8 215 aa13.29□□□□□ -0.28
KDM3B-203ENST00000505756 USP26Q9BXU7 913 aa13.29□□□□□ -0.28
KDM3B-203ENST00000505756 JMJD4Q9H9V9 463 aa13.29□□□□□ -0.28
KDM3B-203ENST00000505756 LY9Q9HBG7 655 aa13.29□□□□□ -0.28
KDM3B-203ENST00000505756 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.29□□□□□ -0.28
KDM3B-203ENST00000505756 SOWAHBA6NEL2 793 aa13.28□□□□□ -0.28
KDM3B-203ENST00000505756 ASB14A6NK59 587 aa13.28□□□□□ -0.28
KDM3B-203ENST00000505756 DNM1LO00429 736 aa13.28□□□□□ -0.28
KDM3B-203ENST00000505756 NFIBO00712 420 aa13.28□□□□□ -0.28
KDM3B-203ENST00000505756 SH2B2O14492 632 aaPredicted RBP13.28□□□□□ -0.28
KDM3B-203ENST00000505756 DDAH1O94760 285 aa13.28□□□□□ -0.28
KDM3B-203ENST00000505756 RARBP10826 455 aa13.28□□□□□ -0.28
KDM3B-203ENST00000505756 AKR1A1P14550 325 aa13.28□□□□□ -0.28
KDM3B-203ENST00000505756 LIFRP42702 1097 aa13.28□□□□□ -0.28
KDM3B-203ENST00000505756 BAATQ14032 418 aaPredicted RBP13.28□□□□□ -0.28
KDM3B-203ENST00000505756 KRT32Q14532 448 aa13.28□□□□□ -0.28
KDM3B-203ENST00000505756 QRICH1Q2TAL8 776 aa13.28□□□□□ -0.28
KDM3B-203ENST00000505756 USH1GQ495M9 461 aa13.28□□□□□ -0.28
KDM3B-203ENST00000505756 CCDC144CPQ8IYA2 1237 aa13.28□□□□□ -0.28
KDM3B-203ENST00000505756 ARRDC4Q8NCT1 418 aa13.28□□□□□ -0.28
KDM3B-203ENST00000505756 DPF3Q92784 378 aa13.28□□□□□ -0.28
KDM3B-203ENST00000505756 NEK1Q96PY6 1258 aa13.28□□□□□ -0.28
KDM3B-203ENST00000505756 MAP3K14Q99558 947 aa13.28□□□□□ -0.28
KDM3B-203ENST00000505756 MAF1Q9H063 256 aa13.28□□□□□ -0.28
KDM3B-203ENST00000505756 ABHD16BQ9H3Z7 469 aa13.28□□□□□ -0.28
KDM3B-203ENST00000505756 VAT1LQ9HCJ6 419 aa13.28□□□□□ -0.28
KDM3B-203ENST00000505756 ZHX1Q9UKY1 873 aaPredicted RBP13.28□□□□□ -0.28
KDM3B-203ENST00000505756 ABCB11O95342 1321 aa13.28□□□□□ -0.28
KDM3B-203ENST00000505756 LOC102724159A0A0B4J2E5 919 aa13.27□□□□□ -0.29
KDM3B-203ENST00000505756 PTPDC1A2A3K4 754 aa13.27□□□□□ -0.29
KDM3B-203ENST00000505756 CCDC69A6NI79 296 aa13.27□□□□□ -0.29
KDM3B-203ENST00000505756 COL6A1P12109 1028 aa13.27□□□□□ -0.29
KDM3B-203ENST00000505756 ACVR2BQ13705 512 aa13.27□□□□□ -0.29
KDM3B-203ENST00000505756 PWP2Q15269 919 aaKnown RBP13.27□□□□□ -0.29
KDM3B-203ENST00000505756 ANO1Q5XXA6 986 aa13.27□□□□□ -0.29
KDM3B-203ENST00000505756 NFXL1Q6ZNB6 911 aa13.27□□□□□ -0.29
KDM3B-203ENST00000505756 RNF207Q6ZRF8 634 aa13.27□□□□□ -0.29
KDM3B-203ENST00000505756 FBXO11Q86XK2 927 aa13.27□□□□□ -0.29
KDM3B-203ENST00000505756 ZNF654Q8IZM8 581 aa13.27□□□□□ -0.29
KDM3B-203ENST00000505756 RGS22Q8NE09 1264 aa13.27□□□□□ -0.29
KDM3B-203ENST00000505756 MTMR8Q96EF0 704 aa13.27□□□□□ -0.29
KDM3B-203ENST00000505756 ADD3Q9UEY8 706 aaKnown RBP13.27□□□□□ -0.29
KDM3B-203ENST00000505756 FAM184BQ9ULE4 1060 aa13.27□□□□□ -0.29
KDM3B-203ENST00000505756 ASTN1O14525 1302 aa13.27□□□□□ -0.29
KDM3B-203ENST00000505756 ZBTB5O15062 677 aa13.26□□□□□ -0.29
KDM3B-203ENST00000505756 CALM1P0DP23 149 aa13.26□□□□□ -0.29
KDM3B-203ENST00000505756 CALM2P0DP24 149 aa13.26□□□□□ -0.29
KDM3B-203ENST00000505756 CALM3P0DP25 149 aa13.26□□□□□ -0.29
KDM3B-203ENST00000505756 KIF5BP33176 963 aa13.26□□□□□ -0.29
KDM3B-203ENST00000505756 HSPA4P34932 840 aa13.26□□□□□ -0.29
KDM3B-203ENST00000505756 ANAPC15P60006 121 aa13.26□□□□□ -0.29
KDM3B-203ENST00000505756 RPS6P62753 249 aaKnown RBP13.26□□□□□ -0.29
KDM3B-203ENST00000505756 COL9A3Q14050 684 aaPredicted RBP13.26□□□□□ -0.29
KDM3B-203ENST00000505756 SLC30A10Q6XR72 485 aa13.26□□□□□ -0.29
KDM3B-203ENST00000505756 RASEFQ8IZ41 740 aa13.26□□□□□ -0.29
KDM3B-203ENST00000505756 IL27Q8NEV9 243 aa13.26□□□□□ -0.29
KDM3B-203ENST00000505756 CTCFLQ8NI51 663 aaPredicted RBP13.26□□□□□ -0.29
KDM3B-203ENST00000505756 NUP133Q8WUM0 1156 aa13.26□□□□□ -0.29
KDM3B-203ENST00000505756 KCNB2Q92953 911 aa13.26□□□□□ -0.29
KDM3B-203ENST00000505756 AMNQ9BXJ7 453 aa13.26□□□□□ -0.29
KDM3B-203ENST00000505756 C22orf23Q9BZE7 217 aa13.26□□□□□ -0.29
KDM3B-203ENST00000505756 KATNBL1Q9H079 304 aa13.26□□□□□ -0.29
KDM3B-203ENST00000505756 RIOX1Q9H6W3 641 aa13.26□□□□□ -0.29
KDM3B-203ENST00000505756 XPNPEP3Q9NQH7 507 aa13.26□□□□□ -0.29
KDM3B-203ENST00000505756 GPHNQ9NQX3 736 aaPredicted RBP13.26□□□□□ -0.29
KDM3B-203ENST00000505756 MRPL11Q9Y3B7 192 aaKnown RBP13.26□□□□□ -0.29
KDM3B-203ENST00000505756 PDE4DIPQ5VU43 2346 aa13.25□□□□□ -0.29
KDM3B-203ENST00000505756 KBTBD13C9JR72 458 aa13.25□□□□□ -0.29
KDM3B-203ENST00000505756 EVI5O60447 810 aa13.25□□□□□ -0.29
KDM3B-203ENST00000505756 HMGB1P09429 215 aaKnown RBP13.25□□□□□ -0.29
KDM3B-203ENST00000505756 CALML3P27482 149 aa13.25□□□□□ -0.29
KDM3B-203ENST00000505756 ALDH5A1P51649 535 aaPredicted RBP13.25□□□□□ -0.29
KDM3B-203ENST00000505756 EXOSC10Q01780 885 aaKnown RBP13.25□□□□□ -0.29
KDM3B-203ENST00000505756 TRAF1Q13077 416 aa13.25□□□□□ -0.29
KDM3B-203ENST00000505756 ADCK5Q3MIX3 580 aa13.25□□□□□ -0.29
KDM3B-203ENST00000505756 GJC2Q5T442 439 aaPredicted RBP13.25□□□□□ -0.29
KDM3B-203ENST00000505756 DHX32Q7L7V1 743 aaKnown RBP13.25□□□□□ -0.29
KDM3B-203ENST00000505756 SGMS1Q86VZ5 419 aa13.25□□□□□ -0.29
KDM3B-203ENST00000505756 MCF2L2Q86YR7 1114 aa13.25□□□□□ -0.29
KDM3B-203ENST00000505756 MORC4Q8TE76 937 aa13.25□□□□□ -0.29
KDM3B-203ENST00000505756 PURBQ96QR8 312 aaKnown RBP13.25□□□□□ -0.29
KDM3B-203ENST00000505756 MPHOSPH6Q99547 160 aaKnown RBP13.25□□□□□ -0.29
KDM3B-203ENST00000505756 LRRC2Q9BYS8 371 aa13.25□□□□□ -0.29
KDM3B-203ENST00000505756 NR2E3Q9Y5X4 410 aa13.25□□□□□ -0.29
KDM3B-203ENST00000505756 SLC12A7Q9Y666 1083 aa13.25□□□□□ -0.29
KDM3B-203ENST00000505756 SMCHD1A6NHR9 2005 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms