RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 TRIM47Q96LD4 638 aa9.61□□□□□ -0.87
CDC42SE2-208ENST00000505065 FEZ1Q99689 392 aa9.61□□□□□ -0.87
CDC42SE2-208ENST00000505065 BAZ2BQ9UIF8 2168 aaKnown RBP9.61□□□□□ -0.87
CDC42SE2-208ENST00000505065 CYP3A4P08684 503 aa9.61□□□□□ -0.87
CDC42SE2-208ENST00000505065 SCG2P13521 617 aa9.61□□□□□ -0.87
CDC42SE2-208ENST00000505065 MUM1L1Q5H9M0 696 aa9.61□□□□□ -0.87
CDC42SE2-208ENST00000505065 PIGSQ96S52 555 aa9.61□□□□□ -0.87
CDC42SE2-208ENST00000505065 PORCNQ9H237 461 aa9.61□□□□□ -0.87
CDC42SE2-208ENST00000505065 CYP39A1Q9NYL5 469 aa9.61□□□□□ -0.87
CDC42SE2-208ENST00000505065 SYNGAP1Q96PV0 1343 aa9.6□□□□□ -0.87
CDC42SE2-208ENST00000505065 FLOT1O75955 427 aa9.6□□□□□ -0.87
CDC42SE2-208ENST00000505065 GOLGA8HP0CJ92 632 aa9.6□□□□□ -0.87
CDC42SE2-208ENST00000505065 TRAF1Q13077 416 aa9.6□□□□□ -0.87
CDC42SE2-208ENST00000505065 NCOA5Q9HCD5 579 aaKnown RBP9.6□□□□□ -0.87
CDC42SE2-208ENST00000505065 FBXO40Q9UH90 709 aa9.6□□□□□ -0.87
CDC42SE2-208ENST00000505065 SCN10AQ9Y5Y9 1956 aa9.6□□□□□ -0.87
CDC42SE2-208ENST00000505065 CYP3A7-CYP3A51PA0A087WV96 503 aa9.6□□□□□ -0.87
CDC42SE2-208ENST00000505065 CYP3A7P24462 503 aa9.6□□□□□ -0.87
CDC42SE2-208ENST00000505065 U2AF2P26368 475 aaKnown RBP eCLIP9.6□□□□□ -0.876e-6■■■■□ 22.5
CDC42SE2-208ENST00000505065 SLC16A2P36021 539 aa9.6□□□□□ -0.87
CDC42SE2-208ENST00000505065 MCTP2Q6DN12 878 aa9.6□□□□□ -0.87
CDC42SE2-208ENST00000505065 GPR142Q7Z601 462 aa9.6□□□□□ -0.87
CDC42SE2-208ENST00000505065 DNERQ8NFT8 737 aa9.6□□□□□ -0.87
CDC42SE2-208ENST00000505065 PXYLP1Q8TE99 480 aa9.6□□□□□ -0.87
CDC42SE2-208ENST00000505065 AGBL1Q96MI9 1066 aa9.6□□□□□ -0.87
CDC42SE2-208ENST00000505065 AMNQ9BXJ7 453 aa9.6□□□□□ -0.87
CDC42SE2-208ENST00000505065 COL20A1Q9P218 1284 aa9.6□□□□□ -0.87
CDC42SE2-208ENST00000505065 PCNTO95613 3336 aa9.59□□□□□ -0.87
CDC42SE2-208ENST00000505065 FOXN1O15353 648 aa9.59□□□□□ -0.87
CDC42SE2-208ENST00000505065 CDKL5O76039 1030 aa9.59□□□□□ -0.87
CDC42SE2-208ENST00000505065 CAPN2P17655 700 aa9.59□□□□□ -0.87
CDC42SE2-208ENST00000505065 TAF1CQ15572 869 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE2-208ENST00000505065 MICU3Q86XE3 530 aa9.59□□□□□ -0.87
CDC42SE2-208ENST00000505065 DHX16O60231 1041 aaKnown RBP9.59□□□□□ -0.87
CDC42SE2-208ENST00000505065 ZBED4O75132 1171 aa9.59□□□□□ -0.87
CDC42SE2-208ENST00000505065 STAT3P40763 770 aa9.59□□□□□ -0.87
CDC42SE2-208ENST00000505065 GPCPD1Q9NPB8 672 aa9.59□□□□□ -0.87
CDC42SE2-208ENST00000505065 SOCS4Q8WXH5 440 aa9.59□□□□□ -0.87
CDC42SE2-208ENST00000505065 RRP36Q96EU6 259 aaKnown RBP9.59□□□□□ -0.87
CDC42SE2-208ENST00000505065 UBA5Q9GZZ9 404 aa9.59□□□□□ -0.87
CDC42SE2-208ENST00000505065 TOMM22Q9NS69 142 aa9.59□□□□□ -0.87
CDC42SE2-208ENST00000505065 CIITAP33076 1130 aa9.59□□□□□ -0.88
CDC42SE2-208ENST00000505065 IRX3P78415 501 aaPredicted RBP9.59□□□□□ -0.88
CDC42SE2-208ENST00000505065 HMGN5P82970 282 aaKnown RBP9.59□□□□□ -0.88
CDC42SE2-208ENST00000505065 ZYXQ15942 572 aaKnown RBP9.59□□□□□ -0.88
CDC42SE2-208ENST00000505065 MOXD1Q6UVY6 613 aa9.59□□□□□ -0.88
CDC42SE2-208ENST00000505065 TRMT44Q8IYL2 757 aaKnown RBP9.59□□□□□ -0.88
CDC42SE2-208ENST00000505065 GLT8D2Q9H1C3 349 aa9.59□□□□□ -0.88
CDC42SE2-208ENST00000505065 CPVLQ9H3G5 476 aa9.59□□□□□ -0.88
CDC42SE2-208ENST00000505065 A1CFQ9NQ94 594 aaKnown RBP9.59□□□□□ -0.88
CDC42SE2-208ENST00000505065 PTPDC1A2A3K4 754 aa9.58□□□□□ -0.88
CDC42SE2-208ENST00000505065 FBXO11Q86XK2 927 aa9.58□□□□□ -0.88
CDC42SE2-208ENST00000505065 ZNF296Q8WUU4 475 aaPredicted RBP9.58□□□□□ -0.88
CDC42SE2-208ENST00000505065 SLKQ9H2G2 1235 aaPredicted RBP9.58□□□□□ -0.88
CDC42SE2-208ENST00000505065 ACAD9Q9H845 621 aa9.58□□□□□ -0.88
CDC42SE2-208ENST00000505065 TSHZ2Q9NRE2 1034 aa9.58□□□□□ -0.88
CDC42SE2-208ENST00000505065 SOWAHBA6NEL2 793 aa9.58□□□□□ -0.88
CDC42SE2-208ENST00000505065 COBLO75128 1261 aa9.58□□□□□ -0.88
CDC42SE2-208ENST00000505065 HOXD8P13378 290 aaPredicted RBP9.58□□□□□ -0.88
CDC42SE2-208ENST00000505065 PDIA4P13667 645 aaKnown RBP9.58□□□□□ -0.88
CDC42SE2-208ENST00000505065 XRRA1Q6P2D8 792 aa9.58□□□□□ -0.88
CDC42SE2-208ENST00000505065 NIPA1Q7RTP0 329 aa9.58□□□□□ -0.88
CDC42SE2-208ENST00000505065 FKTNO75072 461 aa9.58□□□□□ -0.88
CDC42SE2-208ENST00000505065 MMP1P03956 469 aa9.58□□□□□ -0.88
CDC42SE2-208ENST00000505065 ERCC3P19447 782 aa9.58□□□□□ -0.88
CDC42SE2-208ENST00000505065 RXRAP19793 462 aa9.58□□□□□ -0.88
CDC42SE2-208ENST00000505065 SP3Q02447 781 aa9.58□□□□□ -0.88
CDC42SE2-208ENST00000505065 B3GNT9Q6UX72 402 aa9.58□□□□□ -0.88
CDC42SE2-208ENST00000505065 ERO1AQ96HE7 468 aa9.58□□□□□ -0.88
CDC42SE2-208ENST00000505065 ICAM3P32942 547 aa9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 AP3B2Q13367 1082 aa9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 ANKRD13CQ8N6S4 541 aa9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 KIFC2Q96AC6 838 aa9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 MRPL11Q9Y3B7 192 aaKnown RBP9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 NFIBO00712 420 aa9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 TBC1D8O95759 1140 aa9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 SREBF1P36956 1147 aa9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 MKRN3Q13064 507 aaKnown RBP9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 ORC2Q13416 577 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 SNRNP48Q6IEG0 339 aaKnown RBP9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 SYNE3Q6ZMZ3 975 aa9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 PLEKHH3Q7Z736 793 aa9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 SYTL5Q8TDW5 730 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 TRERF1Q96PN7 1200 aa9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 IWS1Q96ST2 819 aa9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 RAVER2Q9HCJ3 691 aaKnown RBP9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 JAK2O60674 1132 aa9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 PEX10O60683 326 aa9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 SSRP1Q08945 709 aaKnown RBP9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 MAP2K5Q13163 448 aa9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 NFXL1Q6ZNB6 911 aa9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 NECAB1Q8N987 351 aa9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 EMID1Q96A84 441 aaPredicted RBP9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 ARMC5Q96C12 935 aa9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 ARHGAP39Q9C0H5 1083 aa9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 SRRDQ9UH36 339 aa9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 CPA4Q9UI42 421 aa9.57□□□□□ -0.88
CDC42SE2-208ENST00000505065 STAM2O75886 525 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 CCNA1P78396 465 aa9.56□□□□□ -0.88
CDC42SE2-208ENST00000505065 SLC30A10Q6XR72 485 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms