RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 LY9Q9HBG7 655 aa11.43□□□□□ -0.58
NR1I3-220ENST00000505005 PAK6Q9NQU5 681 aaPredicted RBP11.43□□□□□ -0.58
NR1I3-220ENST00000505005 COL11A1P12107 1806 aaPredicted RBP11.43□□□□□ -0.58
NR1I3-220ENST00000505005 PLXNB2O15031 1838 aa11.42□□□□□ -0.58
NR1I3-220ENST00000505005 FRMPD2Q68DX3 1309 aaPredicted RBP11.42□□□□□ -0.58
NR1I3-220ENST00000505005 RBBP6Q7Z6E9 1792 aaKnown RBP11.42□□□□□ -0.58
NR1I3-220ENST00000505005 DNAJC25-GNG10A0A024R161 153 aa11.42□□□□□ -0.58
NR1I3-220ENST00000505005 ZBTB43O43298 467 aa11.42□□□□□ -0.58
NR1I3-220ENST00000505005 PRKAR2AP13861 404 aaKnown RBP11.42□□□□□ -0.58
NR1I3-220ENST00000505005 SLC4A3P48751 1232 aa11.42□□□□□ -0.58
NR1I3-220ENST00000505005 EXOSC10Q01780 885 aaKnown RBP11.42□□□□□ -0.58
NR1I3-220ENST00000505005 CDC37Q16543 378 aaPredicted RBP11.42□□□□□ -0.58
NR1I3-220ENST00000505005 ZNF792Q3KQV3 632 aa11.42□□□□□ -0.58
NR1I3-220ENST00000505005 CCDC174Q6PII3 467 aa11.42□□□□□ -0.58
NR1I3-220ENST00000505005 RNF207Q6ZRF8 634 aa11.42□□□□□ -0.58
NR1I3-220ENST00000505005 RUFY3Q7L099 469 aa11.42□□□□□ -0.58
NR1I3-220ENST00000505005 FAM177A1Q8N128 213 aaPredicted RBP11.42□□□□□ -0.58
NR1I3-220ENST00000505005 FANCBQ8NB91 859 aa11.42□□□□□ -0.58
NR1I3-220ENST00000505005 TRIB2Q92519 343 aa11.42□□□□□ -0.58
NR1I3-220ENST00000505005 CUL5Q93034 780 aa11.42□□□□□ -0.58
NR1I3-220ENST00000505005 JAKMIP1Q96N16 626 aaKnown RBP11.42□□□□□ -0.58
NR1I3-220ENST00000505005 IWS1Q96ST2 819 aa11.42□□□□□ -0.58
NR1I3-220ENST00000505005 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.42□□□□□ -0.58
NR1I3-220ENST00000505005 RTN4Q9NQC3 1192 aaKnown RBP11.42□□□□□ -0.58
NR1I3-220ENST00000505005 MAD2L2Q9UI95 211 aa11.42□□□□□ -0.58
NR1I3-220ENST00000505005 ZNF536O15090 1300 aa11.41□□□□□ -0.58
NR1I3-220ENST00000505005 SEPT4O43236 478 aa11.41□□□□□ -0.58
NR1I3-220ENST00000505005 ECM2O94769 699 aaPredicted RBP11.41□□□□□ -0.58
NR1I3-220ENST00000505005 ELNP15502 786 aa11.41□□□□□ -0.58
NR1I3-220ENST00000505005 SLC16A2P36021 539 aa11.41□□□□□ -0.58
NR1I3-220ENST00000505005 AKAP17AQ02040 695 aaKnown RBP11.41□□□□□ -0.58
NR1I3-220ENST00000505005 TTBK2Q6IQ55 1244 aa11.41□□□□□ -0.58
NR1I3-220ENST00000505005 POTEEQ6S8J3 1075 aa11.41□□□□□ -0.58
NR1I3-220ENST00000505005 STOX1Q6ZVD7 989 aa11.41□□□□□ -0.58
NR1I3-220ENST00000505005 U2AF1L4Q8WU68 220 aaKnown RBP11.41□□□□□ -0.58
NR1I3-220ENST00000505005 CCDC12Q8WUD4 166 aaPredicted RBP11.41□□□□□ -0.58
NR1I3-220ENST00000505005 MTMR8Q96EF0 704 aa11.41□□□□□ -0.58
NR1I3-220ENST00000505005 AGBL1Q96MI9 1066 aa11.41□□□□□ -0.58
NR1I3-220ENST00000505005 SEZ6LQ9BYH1 1024 aa11.41□□□□□ -0.58
NR1I3-220ENST00000505005 EHMT1Q9H9B1 1298 aa11.41□□□□□ -0.58
NR1I3-220ENST00000505005 FAM184BQ9ULE4 1060 aa11.41□□□□□ -0.58
NR1I3-220ENST00000505005 SNX14Q9Y5W7 946 aa11.41□□□□□ -0.58
NR1I3-220ENST00000505005 PTPDC1A2A3K4 754 aa11.4□□□□□ -0.58
NR1I3-220ENST00000505005 GOLGA8HP0CJ92 632 aa11.4□□□□□ -0.58
NR1I3-220ENST00000505005 RARBP10826 455 aa11.4□□□□□ -0.58
NR1I3-220ENST00000505005 AKR1A1P14550 325 aa11.4□□□□□ -0.58
NR1I3-220ENST00000505005 CASTP20810 708 aaKnown RBP11.4□□□□□ -0.58
NR1I3-220ENST00000505005 RPS6KB1P23443 525 aa11.4□□□□□ -0.58
NR1I3-220ENST00000505005 CNGA1P29973 690 aa11.4□□□□□ -0.58
NR1I3-220ENST00000505005 ANTXR2P58335 489 aa11.4□□□□□ -0.58
NR1I3-220ENST00000505005 CACNB2Q08289 660 aaPredicted RBP11.4□□□□□ -0.58
NR1I3-220ENST00000505005 BRDTQ58F21 947 aaPredicted RBP11.4□□□□□ -0.58
NR1I3-220ENST00000505005 KCNV1Q6PIU1 500 aa11.4□□□□□ -0.58
NR1I3-220ENST00000505005 NSMFQ6X4W1 530 aa11.4□□□□□ -0.58
NR1I3-220ENST00000505005 NECAB2Q7Z6G3 386 aa11.4□□□□□ -0.58
NR1I3-220ENST00000505005 FAM133AQ8N9E0 248 aa11.4□□□□□ -0.58
NR1I3-220ENST00000505005 AGXT2Q9BYV1 514 aa11.4□□□□□ -0.58
NR1I3-220ENST00000505005 UBA5Q9GZZ9 404 aa11.4□□□□□ -0.58
NR1I3-220ENST00000505005 ALDH8A1Q9H2A2 487 aaPredicted RBP11.4□□□□□ -0.58
NR1I3-220ENST00000505005 JMJD4Q9H9V9 463 aa11.4□□□□□ -0.58
NR1I3-220ENST00000505005 ZSWIM6Q9HCJ5 1215 aa11.4□□□□□ -0.58
NR1I3-220ENST00000505005 VAT1LQ9HCJ6 419 aa11.4□□□□□ -0.58
NR1I3-220ENST00000505005 A1CFQ9NQ94 594 aaKnown RBP11.4□□□□□ -0.58
NR1I3-220ENST00000505005 CYP39A1Q9NYL5 469 aa11.4□□□□□ -0.58
NR1I3-220ENST00000505005 DDX20Q9UHI6 824 aaKnown RBP11.4□□□□□ -0.58
NR1I3-220ENST00000505005 PCDHA1Q9Y5I3 950 aa11.4□□□□□ -0.58
NR1I3-220ENST00000505005 MYH6P13533 1939 aa11.4□□□□□ -0.58
NR1I3-220ENST00000505005 NKRFO15226 690 aaKnown RBP eCLIP11.39□□□□□ -0.59
NR1I3-220ENST00000505005 ZEB2O60315 1214 aa11.39□□□□□ -0.59
NR1I3-220ENST00000505005 COBLO75128 1261 aa11.39□□□□□ -0.59
NR1I3-220ENST00000505005 STAM2O75886 525 aa11.39□□□□□ -0.59
NR1I3-220ENST00000505005 CDKL5O76039 1030 aa11.39□□□□□ -0.59
NR1I3-220ENST00000505005 METAP2P50579 478 aaKnown RBP eCLIP11.39□□□□□ -0.59
NR1I3-220ENST00000505005 GHRHRQ02643 423 aa11.39□□□□□ -0.59
NR1I3-220ENST00000505005 RTN1Q16799 776 aa11.39□□□□□ -0.59
NR1I3-220ENST00000505005 QRICH1Q2TAL8 776 aa11.39□□□□□ -0.59
NR1I3-220ENST00000505005 IQSEC1Q6DN90 963 aa11.39□□□□□ -0.59
NR1I3-220ENST00000505005 XRRA1Q6P2D8 792 aa11.39□□□□□ -0.59
NR1I3-220ENST00000505005 APOA5Q6Q788 366 aa11.39□□□□□ -0.59
NR1I3-220ENST00000505005 CHST3Q7LGC8 479 aa11.39□□□□□ -0.59
NR1I3-220ENST00000505005 RNF180Q86T96 592 aa11.39□□□□□ -0.59
NR1I3-220ENST00000505005 NPLOC4Q8TAT6 608 aa11.39□□□□□ -0.59
NR1I3-220ENST00000505005 NSUN6Q8TEA1 469 aaKnown RBP11.39□□□□□ -0.59
NR1I3-220ENST00000505005 ZNF274Q96GC6 653 aaPredicted RBP11.39□□□□□ -0.59
NR1I3-220ENST00000505005 DEFB118Q96PH6 123 aa11.39□□□□□ -0.59
NR1I3-220ENST00000505005 CRISPLD2Q9H0B8 497 aa11.39□□□□□ -0.59
NR1I3-220ENST00000505005 UNC93B1Q9H1C4 597 aa11.39□□□□□ -0.59
NR1I3-220ENST00000505005 VTA1Q9NP79 307 aa11.39□□□□□ -0.59
NR1I3-220ENST00000505005 HOMER2Q9NSB8 354 aa11.39□□□□□ -0.59
NR1I3-220ENST00000505005 OGDHLQ9ULD0 1010 aa11.39□□□□□ -0.59
NR1I3-220ENST00000505005 Q9Y3F1 56 aa11.39□□□□□ -0.59
NR1I3-220ENST00000505005 RIPK3Q9Y572 518 aa11.39□□□□□ -0.59
NR1I3-220ENST00000505005 KIAA0100Q14667 2235 aaKnown RBP11.39□□□□□ -0.59
NR1I3-220ENST00000505005 PLXNA1Q9UIW2 1896 aa11.38□□□□□ -0.59
NR1I3-220ENST00000505005 KBTBD13C9JR72 458 aa11.38□□□□□ -0.59
NR1I3-220ENST00000505005 GCOM1H8Y6P7 765 aaPredicted RBP11.38□□□□□ -0.59
NR1I3-220ENST00000505005 IGHA2P01877 340 aa11.38□□□□□ -0.59
NR1I3-220ENST00000505005 POLR2MP0CAP2 368 aa11.38□□□□□ -0.59
NR1I3-220ENST00000505005 EVCP57679 992 aa11.38□□□□□ -0.59
NR1I3-220ENST00000505005 CAP1Q01518 475 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms