RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 HECW2Q9P2P5 1572 aa5.48□□□□□ -1.53
RFC1-208ENST00000504849 ATAD2BQ9ULI0 1458 aa5.48□□□□□ -1.53
RFC1-208ENST00000504849 PLEKHD1A6NEE1 506 aa5.48□□□□□ -1.53
RFC1-208ENST00000504849 ANP32CO43423 234 aa5.48□□□□□ -1.53
RFC1-208ENST00000504849 BUB1BO60566 1050 aaPredicted RBP5.48□□□□□ -1.53
RFC1-208ENST00000504849 CNR2P34972 360 aa5.48□□□□□ -1.53
RFC1-208ENST00000504849 NCKAP1LP55160 1127 aa5.48□□□□□ -1.53
RFC1-208ENST00000504849 LIPIQ6XZB0 460 aa5.48□□□□□ -1.53
RFC1-208ENST00000504849 HDXQ7Z353 690 aa5.48□□□□□ -1.53
RFC1-208ENST00000504849 SPRED1Q7Z699 444 aa5.48□□□□□ -1.53
RFC1-208ENST00000504849 TTC9BQ8N6N2 239 aa5.48□□□□□ -1.53
RFC1-208ENST00000504849 GAL3ST3Q96A11 431 aa5.48□□□□□ -1.53
RFC1-208ENST00000504849 USP40Q9NVE5 1235 aa5.48□□□□□ -1.53
RFC1-208ENST00000504849 STRIP2Q9ULQ0 834 aa5.48□□□□□ -1.53
RFC1-208ENST00000504849 COL4A3BPQ9Y5P4 624 aa5.48□□□□□ -1.53
RFC1-208ENST00000504849 LAMC3Q9Y6N6 1575 aa5.47□□□□□ -1.53
RFC1-208ENST00000504849 ABLIM1O14639 778 aa5.47□□□□□ -1.53
RFC1-208ENST00000504849 SSBP05455 408 aaKnown RBP eCLIP5.47□□□□□ -1.53
RFC1-208ENST00000504849 PNLIPP16233 465 aa5.47□□□□□ -1.53
RFC1-208ENST00000504849 GRK4P32298 578 aa5.47□□□□□ -1.53
RFC1-208ENST00000504849 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.47□□□□□ -1.53
RFC1-208ENST00000504849 PLEKHG4Q58EX7 1191 aa5.47□□□□□ -1.53
RFC1-208ENST00000504849 TPTE2Q6XPS3 522 aa5.47□□□□□ -1.53
RFC1-208ENST00000504849 TMC6Q7Z403 805 aa5.47□□□□□ -1.53
RFC1-208ENST00000504849 LRP10Q7Z4F1 713 aa5.47□□□□□ -1.53
RFC1-208ENST00000504849 PLCD4Q9BRC7 762 aa5.47□□□□□ -1.53
RFC1-208ENST00000504849 SPC25Q9HBM1 224 aa5.47□□□□□ -1.53
RFC1-208ENST00000504849 SETD5Q9C0A6 1442 aa5.47□□□□□ -1.53
RFC1-208ENST00000504849 RAB3GAP2Q9H2M9 1393 aa5.46□□□□□ -1.54
RFC1-208ENST00000504849 PPP1R12AO14974 1030 aaPredicted RBP5.46□□□□□ -1.54
RFC1-208ENST00000504849 DNAJC6O75061 913 aa5.46□□□□□ -1.54
RFC1-208ENST00000504849 LIMS1P48059 325 aa5.46□□□□□ -1.54
RFC1-208ENST00000504849 PWP1Q13610 501 aa5.46□□□□□ -1.54
RFC1-208ENST00000504849 OLFML2BQ68BL8 750 aa5.46□□□□□ -1.54
RFC1-208ENST00000504849 FILIP1Q7Z7B0 1213 aa5.46□□□□□ -1.54
RFC1-208ENST00000504849 MRPL41Q8IXM3 137 aaKnown RBP5.46□□□□□ -1.54
RFC1-208ENST00000504849 DHX37Q8IY37 1157 aaKnown RBP5.46□□□□□ -1.54
RFC1-208ENST00000504849 SYTL4Q96C24 671 aaPredicted RBP5.46□□□□□ -1.54
RFC1-208ENST00000504849 NOC4LQ9BVI4 516 aaKnown RBP5.46□□□□□ -1.54
RFC1-208ENST00000504849 OSBPL7Q9BZF2 842 aa5.46□□□□□ -1.54
RFC1-208ENST00000504849 PCDH12Q9NPG4 1184 aa5.46□□□□□ -1.54
RFC1-208ENST00000504849 KLHL42Q9P2K6 505 aa5.46□□□□□ -1.54
RFC1-208ENST00000504849 TJP2Q9UDY2 1190 aa5.46□□□□□ -1.54
RFC1-208ENST00000504849 IRS2Q9Y4H2 1338 aa5.46□□□□□ -1.54
RFC1-208ENST00000504849 WDR62O43379 1518 aa5.45□□□□□ -1.54
RFC1-208ENST00000504849 SHISA3A0PJX4 238 aa5.45□□□□□ -1.54
RFC1-208ENST00000504849 U2SURPO15042 1029 aaKnown RBP5.45□□□□□ -1.54
RFC1-208ENST00000504849 NOBOXO60393 691 aa5.45□□□□□ -1.54
RFC1-208ENST00000504849 LRRN2O75325 713 aa5.45□□□□□ -1.54
RFC1-208ENST00000504849 PLA2G1BP04054 148 aaKnown RBP5.45□□□□□ -1.54
RFC1-208ENST00000504849 COL9A2Q14055 689 aaPredicted RBP5.45□□□□□ -1.54
RFC1-208ENST00000504849 LRRC14Q15048 493 aa5.45□□□□□ -1.54
RFC1-208ENST00000504849 WIPI1Q5MNZ9 446 aaPredicted RBP5.45□□□□□ -1.54
RFC1-208ENST00000504849 MEI1Q5TIA1 1274 aa5.45□□□□□ -1.54
RFC1-208ENST00000504849 DDX1Q92499 740 aaKnown RBP5.45□□□□□ -1.54
RFC1-208ENST00000504849 SAMD11Q96NU1 681 aa5.45□□□□□ -1.54
RFC1-208ENST00000504849 SPON2Q9BUD6 331 aa5.45□□□□□ -1.54
RFC1-208ENST00000504849 RSRP1Q9BUV0 290 aa5.45□□□□□ -1.54
RFC1-208ENST00000504849 IFT57Q9NWB7 429 aa5.45□□□□□ -1.54
RFC1-208ENST00000504849 SUGT1Q9Y2Z0 365 aa5.45□□□□□ -1.54
RFC1-208ENST00000504849 SNCAIPQ9Y6H5 919 aa5.45□□□□□ -1.54
RFC1-208ENST00000504849 FHAD1B1AJZ9 1412 aa5.45□□□□□ -1.54
RFC1-208ENST00000504849 FANCIQ9NVI1 1328 aa5.45□□□□□ -1.54
RFC1-208ENST00000504849 SYNJ2O15056 1496 aa5.45□□□□□ -1.54
RFC1-208ENST00000504849 MRC2Q9UBG0 1479 aa5.45□□□□□ -1.54
RFC1-208ENST00000504849 MAPKBP1O60336 1514 aa5.44□□□□□ -1.54
RFC1-208ENST00000504849 USP17L7P0C7H9 530 aa5.44□□□□□ -1.54
RFC1-208ENST00000504849 KIR3DS1Q14943 382 aa5.44□□□□□ -1.54
RFC1-208ENST00000504849 CDSNQ15517 529 aa5.44□□□□□ -1.54
RFC1-208ENST00000504849 HSP90AB2PQ58FF8 381 aa5.44□□□□□ -1.54
RFC1-208ENST00000504849 NXPE4Q6UWF7 544 aa5.44□□□□□ -1.54
RFC1-208ENST00000504849 KIAA0825Q8IV33 1275 aa5.44□□□□□ -1.54
RFC1-208ENST00000504849 RNPC3Q96LT9 517 aaKnown RBP5.44□□□□□ -1.54
RFC1-208ENST00000504849 SRPK1Q96SB4 655 aaKnown RBP5.44□□□□□ -1.54
RFC1-208ENST00000504849 TRIM55Q9BYV6 548 aa5.44□□□□□ -1.54
RFC1-208ENST00000504849 SLKQ9H2G2 1235 aaPredicted RBP5.44□□□□□ -1.54
RFC1-208ENST00000504849 ZNF408Q9H9D4 720 aa5.44□□□□□ -1.54
RFC1-208ENST00000504849 PPP4R2Q9NY27 417 aa5.44□□□□□ -1.54
RFC1-208ENST00000504849 CEP131Q9UPN4 1083 aa5.44□□□□□ -1.54
RFC1-208ENST00000504849 RIPOR2Q9Y4F9 1068 aa5.44□□□□□ -1.54
RFC1-208ENST00000504849 SAMM50Q9Y512 469 aa5.44□□□□□ -1.54
RFC1-208ENST00000504849 TACC3Q9Y6A5 838 aa5.44□□□□□ -1.54
RFC1-208ENST00000504849 TIAM1Q13009 1591 aa5.43□□□□□ -1.54
RFC1-208ENST00000504849 FBXO24O75426 580 aa5.43□□□□□ -1.54
RFC1-208ENST00000504849 KIR2DL1P43626 348 aaPredicted RBP5.43□□□□□ -1.54
RFC1-208ENST00000504849 KIR2DL2P43627 348 aaPredicted RBP5.43□□□□□ -1.54
RFC1-208ENST00000504849 DLX2Q07687 328 aaPredicted RBP5.43□□□□□ -1.54
RFC1-208ENST00000504849 RAB33AQ14088 237 aa5.43□□□□□ -1.54
RFC1-208ENST00000504849 TAF7LQ5H9L4 462 aa5.43□□□□□ -1.54
RFC1-208ENST00000504849 MAP6Q96JE9 813 aa5.43□□□□□ -1.54
RFC1-208ENST00000504849 HHIPL1Q96JK4 782 aa5.43□□□□□ -1.54
RFC1-208ENST00000504849 PRDM14Q9GZV8 571 aa5.43□□□□□ -1.54
RFC1-208ENST00000504849 MYH16Q9H6N6 1097 aa5.43□□□□□ -1.54
RFC1-208ENST00000504849 MAGEC2Q9UBF1 373 aaPredicted RBP5.43□□□□□ -1.54
RFC1-208ENST00000504849 CYP8B1Q9UNU6 501 aa5.43□□□□□ -1.54
RFC1-208ENST00000504849 ARHGAP35Q9NRY4 1499 aa5.43□□□□□ -1.54
RFC1-208ENST00000504849 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.42□□□□□ -1.54
RFC1-208ENST00000504849 KLF4O43474 513 aa5.42□□□□□ -1.54
RFC1-208ENST00000504849 FZD7O75084 574 aa5.42□□□□□ -1.54
RFC1-208ENST00000504849 PARNO95453 639 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms