RNA–Protein interactions for RNA: ENST00000504466.1

HMGCR-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 1,107 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-204ENST00000504466 GDNFP39905 211 aa6.96□□□□□ -1.3
HMGCR-204ENST00000504466 KRTAP19-4Q3LI73 84 aa6.96□□□□□ -1.3
HMGCR-204ENST00000504466 ZNF746Q6NUN9 644 aaPredicted RBP6.96□□□□□ -1.3
HMGCR-204ENST00000504466 GOLM1Q8NBJ4 401 aa6.96□□□□□ -1.3
HMGCR-204ENST00000504466 RIN3Q8TB24 985 aa6.96□□□□□ -1.3
HMGCR-204ENST00000504466 COX4I2Q96KJ9 171 aa6.96□□□□□ -1.3
HMGCR-204ENST00000504466 SLC38A3Q99624 504 aa6.96□□□□□ -1.3
HMGCR-204ENST00000504466 NT5C1AQ9BXI3 368 aa6.96□□□□□ -1.3
HMGCR-204ENST00000504466 MIR1-1HGQ9H1L0 117 aa6.96□□□□□ -1.3
HMGCR-204ENST00000504466 CARS2Q9HA77 564 aaKnown RBP6.96□□□□□ -1.3
HMGCR-204ENST00000504466 ZNF142P52746 1687 aaPredicted RBP6.96□□□□□ -1.3
HMGCR-204ENST00000504466 FAM155AB1AL88 458 aaPredicted RBP6.95□□□□□ -1.3
HMGCR-204ENST00000504466 GREM1O60565 184 aa6.95□□□□□ -1.3
HMGCR-204ENST00000504466 GLI1P08151 1106 aa6.95□□□□□ -1.3
HMGCR-204ENST00000504466 CDK8P49336 464 aa6.95□□□□□ -1.3
HMGCR-204ENST00000504466 FBLN7Q53RD9 439 aa6.95□□□□□ -1.3
HMGCR-204ENST00000504466 WIPI1Q5MNZ9 446 aaPredicted RBP6.95□□□□□ -1.3
HMGCR-204ENST00000504466 LCE4AQ5TA78 99 aa6.95□□□□□ -1.3
HMGCR-204ENST00000504466 LETMD1Q6P1Q0 360 aa6.95□□□□□ -1.3
HMGCR-204ENST00000504466 CCDC84Q86UT8 332 aaPredicted RBP6.95□□□□□ -1.3
HMGCR-204ENST00000504466 THEMISQ8N1K5 641 aaPredicted RBP6.95□□□□□ -1.3
HMGCR-204ENST00000504466 ARMC5Q96C12 935 aa6.95□□□□□ -1.3
HMGCR-204ENST00000504466 EAF1Q96JC9 268 aaPredicted RBP6.95□□□□□ -1.3
HMGCR-204ENST00000504466 MIPEPQ99797 713 aa6.95□□□□□ -1.3
HMGCR-204ENST00000504466 CDK19Q9BWU1 502 aa6.95□□□□□ -1.3
HMGCR-204ENST00000504466 POGKQ9P215 609 aa6.95□□□□□ -1.3
HMGCR-204ENST00000504466 TPX2Q9ULW0 747 aaKnown RBP6.95□□□□□ -1.3
HMGCR-204ENST00000504466 TBX22Q9Y458 520 aa6.95□□□□□ -1.3
HMGCR-204ENST00000504466 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.95□□□□□ -1.3
HMGCR-204ENST00000504466 ANKRD36BQ8N2N9 1353 aa6.95□□□□□ -1.3
HMGCR-204ENST00000504466 ROBO2Q9HCK4 1378 aa6.95□□□□□ -1.3
HMGCR-204ENST00000504466 NSD3Q9BZ95 1437 aa6.94□□□□□ -1.3
HMGCR-204ENST00000504466 LIN37Q96GY3 246 aaPredicted RBP6.94□□□□□ -1.3
HMGCR-204ENST00000504466 SEC16BQ96JE7 1060 aa6.94□□□□□ -1.3
HMGCR-204ENST00000504466 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.94□□□□□ -1.3
HMGCR-204ENST00000504466 PCDHB5Q9Y5E4 795 aa6.94□□□□□ -1.3
HMGCR-204ENST00000504466 ZBED9Q6R2W3 1325 aa6.94□□□□□ -1.3
HMGCR-204ENST00000504466 A0A1W2PP64 1363 aa6.94□□□□□ -1.3
HMGCR-204ENST00000504466 INSRP06213 1382 aa6.94□□□□□ -1.3
HMGCR-204ENST00000504466 NINLQ9Y2I6 1382 aa6.94□□□□□ -1.3
HMGCR-204ENST00000504466 TSPAN15O95858 294 aa6.93□□□□□ -1.3
HMGCR-204ENST00000504466 FGRP09769 529 aa6.93□□□□□ -1.3
HMGCR-204ENST00000504466 GTF2F1P35269 517 aaKnown RBP eCLIP6.93□□□□□ -1.3
HMGCR-204ENST00000504466 KIR3DL1P43629 444 aa6.93□□□□□ -1.3
HMGCR-204ENST00000504466 ETF1P62495 437 aaKnown RBP6.93□□□□□ -1.3
HMGCR-204ENST00000504466 APOBRQ0VD83 1088 aa6.93□□□□□ -1.3
HMGCR-204ENST00000504466 COL9A2Q14055 689 aaPredicted RBP6.93□□□□□ -1.3
HMGCR-204ENST00000504466 MLANAQ16655 118 aa6.93□□□□□ -1.3
HMGCR-204ENST00000504466 PRAMEF13Q5VWM6 474 aa6.93□□□□□ -1.3
HMGCR-204ENST00000504466 FAM196AQ6ZSG2 479 aa6.93□□□□□ -1.3
HMGCR-204ENST00000504466 MCF2L2Q86YR7 1114 aa6.93□□□□□ -1.3
HMGCR-204ENST00000504466 MRPL41Q8IXM3 137 aaKnown RBP6.93□□□□□ -1.3
HMGCR-204ENST00000504466 KIRREL1Q96J84 757 aa6.93□□□□□ -1.3
HMGCR-204ENST00000504466 UBP1Q9NZI7 540 aa6.93□□□□□ -1.3
HMGCR-204ENST00000504466 DIP2AQ14689 1571 aa6.93□□□□□ -1.3
HMGCR-204ENST00000504466 XRN1Q8IZH2 1706 aaKnown RBP6.93□□□□□ -1.3
HMGCR-204ENST00000504466 ADGRB2O60241 1585 aa6.92□□□□□ -1.3
HMGCR-204ENST00000504466 GRK4P32298 578 aa6.92□□□□□ -1.3
HMGCR-204ENST00000504466 SEPT6Q14141 434 aa6.92□□□□□ -1.3
HMGCR-204ENST00000504466 CDKAL1Q5VV42 579 aa6.92□□□□□ -1.3
HMGCR-204ENST00000504466 BNC2Q6ZN30 1099 aaPredicted RBP6.92□□□□□ -1.3
HMGCR-204ENST00000504466 GATAD2BQ8WXI9 593 aa6.92□□□□□ -1.3
HMGCR-204ENST00000504466 DHX38Q92620 1227 aaKnown RBP6.92□□□□□ -1.3
HMGCR-204ENST00000504466 JARID2Q92833 1246 aaPredicted RBP6.92□□□□□ -1.3
HMGCR-204ENST00000504466 NKD1Q969G9 470 aa6.92□□□□□ -1.3
HMGCR-204ENST00000504466 CCDC120Q96HB5 630 aa6.92□□□□□ -1.3
HMGCR-204ENST00000504466 SLC26A8Q96RN1 970 aa6.92□□□□□ -1.3
HMGCR-204ENST00000504466 KRTAP4-9Q9BYQ8 210 aa6.92□□□□□ -1.3
HMGCR-204ENST00000504466 EFR3BQ9Y2G0 817 aa6.92□□□□□ -1.3
HMGCR-204ENST00000504466 EID1Q9Y6B2 187 aa6.92□□□□□ -1.3
HMGCR-204ENST00000504466 BLMP54132 1417 aaPredicted RBP6.92□□□□□ -1.3
HMGCR-204ENST00000504466 ANKRD26Q9UPS8 1709 aa6.91□□□□□ -1.3
HMGCR-204ENST00000504466 H3BS24 57 aa6.91□□□□□ -1.3
HMGCR-204ENST00000504466 F13A1P00488 732 aa6.91□□□□□ -1.3
HMGCR-204ENST00000504466 CYP7A1P22680 504 aa6.91□□□□□ -1.3
HMGCR-204ENST00000504466 SOX9P48436 509 aa6.91□□□□□ -1.3
HMGCR-204ENST00000504466 NASPP49321 788 aaPredicted RBP6.91□□□□□ -1.3
HMGCR-204ENST00000504466 MPP2Q14168 576 aa6.91□□□□□ -1.3
HMGCR-204ENST00000504466 PIWIL2Q8TC59 973 aaKnown RBP6.91□□□□□ -1.3
HMGCR-204ENST00000504466 PPP1R16BQ96T49 567 aa6.91□□□□□ -1.3
HMGCR-204ENST00000504466 LRRC3Q9BY71 257 aa6.91□□□□□ -1.3
HMGCR-204ENST00000504466 GINM1Q9NU53 330 aa6.91□□□□□ -1.3
HMGCR-204ENST00000504466 CHD2O14647 1828 aaKnown RBP6.91□□□□□ -1.3
HMGCR-204ENST00000504466 PRR36Q9H6K5 1346 aa6.91□□□□□ -1.3
HMGCR-204ENST00000504466 CPSF1Q10570 1443 aaKnown RBP6.91□□□□□ -1.3
HMGCR-204ENST00000504466 PTCH1Q13635 1447 aa6.91□□□□□ -1.3
HMGCR-204ENST00000504466 FAM221AA4D161 298 aa6.9□□□□□ -1.3
HMGCR-204ENST00000504466 FYB1O15117 783 aa6.9□□□□□ -1.3
HMGCR-204ENST00000504466 CILPO75339 1184 aa6.9□□□□□ -1.3
HMGCR-204ENST00000504466 STK10O94804 968 aaKnown RBP6.9□□□□□ -1.3
HMGCR-204ENST00000504466 BPNT1O95861 308 aa6.9□□□□□ -1.3
HMGCR-204ENST00000504466 SSBP05455 408 aaKnown RBP eCLIP6.9□□□□□ -1.3
HMGCR-204ENST00000504466 CRKP46108 304 aa6.9□□□□□ -1.3
HMGCR-204ENST00000504466 TNK2Q07912 1038 aa6.9□□□□□ -1.3
HMGCR-204ENST00000504466 TMEM67Q5HYA8 995 aa6.9□□□□□ -1.3
HMGCR-204ENST00000504466 SLITRK4Q8IW52 837 aa6.9□□□□□ -1.3
HMGCR-204ENST00000504466 ALPK1Q96QP1 1244 aa6.9□□□□□ -1.3
HMGCR-204ENST00000504466 TJP2Q9UDY2 1190 aa6.9□□□□□ -1.3
HMGCR-204ENST00000504466 STRIP2Q9ULQ0 834 aa6.9□□□□□ -1.3
HMGCR-204ENST00000504466 POLR3AO14802 1390 aaPredicted RBP6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms