RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 NFIBO00712 420 aa16.45■□□□□ 0.22
PDLIM7-211ENST00000504318 SGSM2O43147 1006 aa16.45■□□□□ 0.22
PDLIM7-211ENST00000504318 DUSP11O75319 330 aaKnown RBP16.45■□□□□ 0.22
PDLIM7-211ENST00000504318 CCDC144BQ3MJ40 725 aa16.45■□□□□ 0.22
PDLIM7-211ENST00000504318 ZSCAN10Q96SZ4 725 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-211ENST00000504318 CPVLQ9H3G5 476 aa16.45■□□□□ 0.22
PDLIM7-211ENST00000504318 FAM184BQ9ULE4 1060 aa16.45■□□□□ 0.22
PDLIM7-211ENST00000504318 WDR19Q8NEZ3 1342 aa16.45■□□□□ 0.22
PDLIM7-211ENST00000504318 LAMA2P24043 3122 aaKnown RBP16.44■□□□□ 0.22
PDLIM7-211ENST00000504318 A0A1W2PQ45 241 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-211ENST00000504318 A0A1W2PQY0 241 aa16.44■□□□□ 0.22
PDLIM7-211ENST00000504318 POTEB2H3BUK9 544 aa16.44■□□□□ 0.22
PDLIM7-211ENST00000504318 CYP21A2P08686 494 aa16.44■□□□□ 0.22
PDLIM7-211ENST00000504318 PTGS1P23219 599 aa16.44■□□□□ 0.22
PDLIM7-211ENST00000504318 GJA9P57773 515 aa16.44■□□□□ 0.22
PDLIM7-211ENST00000504318 IMMTQ16891 758 aaKnown RBP16.44■□□□□ 0.22
PDLIM7-211ENST00000504318 TRIM60Q495X7 471 aa16.44■□□□□ 0.22
PDLIM7-211ENST00000504318 CYB5R4Q7L1T6 521 aa16.44■□□□□ 0.22
PDLIM7-211ENST00000504318 PNMA1Q8ND90 353 aa16.44■□□□□ 0.22
PDLIM7-211ENST00000504318 FERMT2Q96AC1 680 aa16.44■□□□□ 0.22
PDLIM7-211ENST00000504318 TSEN34Q9BSV6 310 aaKnown RBP16.44■□□□□ 0.22
PDLIM7-211ENST00000504318 PDLIM7Q9NR12 457 aa16.44■□□□□ 0.22
PDLIM7-211ENST00000504318 CTNNA3Q9UI47 895 aa16.44■□□□□ 0.22
PDLIM7-211ENST00000504318 ZHX1Q9UKY1 873 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-211ENST00000504318 ISY1Q9ULR0 285 aaKnown RBP16.44■□□□□ 0.22
PDLIM7-211ENST00000504318 GNEQ9Y223 722 aaKnown RBP16.44■□□□□ 0.22
PDLIM7-211ENST00000504318 MYH6P13533 1939 aa16.44■□□□□ 0.22
PDLIM7-211ENST00000504318 TNKSO95271 1327 aa16.44■□□□□ 0.22
PDLIM7-211ENST00000504318 NEFLP07196 543 aa16.43■□□□□ 0.22
PDLIM7-211ENST00000504318 GOLGA8HP0CJ92 632 aa16.43■□□□□ 0.22
PDLIM7-211ENST00000504318 ITGB8P26012 769 aa16.43■□□□□ 0.22
PDLIM7-211ENST00000504318 SLC35G1Q2M3R5 365 aa16.43■□□□□ 0.22
PDLIM7-211ENST00000504318 TMEM63BQ5T3F8 832 aa16.43■□□□□ 0.22
PDLIM7-211ENST00000504318 GPATCH4Q5T3I0 446 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-211ENST00000504318 TAPT1Q6NXT6 567 aa16.43■□□□□ 0.22
PDLIM7-211ENST00000504318 STOX1Q6ZVD7 989 aa16.43■□□□□ 0.22
PDLIM7-211ENST00000504318 SH3RF1Q7Z6J0 888 aa16.43■□□□□ 0.22
PDLIM7-211ENST00000504318 RNF180Q86T96 592 aa16.43■□□□□ 0.22
PDLIM7-211ENST00000504318 TRIM43BA6NCK2 446 aa16.42■□□□□ 0.22
PDLIM7-211ENST00000504318 ACLYP53396 1101 aa16.42■□□□□ 0.22
PDLIM7-211ENST00000504318 LRIT3Q3SXY7 679 aa16.42■□□□□ 0.22
PDLIM7-211ENST00000504318 SLC30A10Q6XR72 485 aa16.42■□□□□ 0.22
PDLIM7-211ENST00000504318 SKAP1Q86WV1 359 aa16.42■□□□□ 0.22
PDLIM7-211ENST00000504318 IQCA1Q86XH1 822 aa16.42■□□□□ 0.22
PDLIM7-211ENST00000504318 TRIM43Q96BQ3 446 aaPredicted RBP16.42■□□□□ 0.22
PDLIM7-211ENST00000504318 LRCH3Q96II8 777 aa16.42■□□□□ 0.22
PDLIM7-211ENST00000504318 ASB14A6NK59 587 aa16.41■□□□□ 0.22
PDLIM7-211ENST00000504318 MDM2Q00987 491 aaPredicted RBP16.41■□□□□ 0.22
PDLIM7-211ENST00000504318 BAATQ14032 418 aaPredicted RBP16.41■□□□□ 0.22
PDLIM7-211ENST00000504318 COL9A3Q14050 684 aaPredicted RBP16.41■□□□□ 0.22
PDLIM7-211ENST00000504318 KCNA10Q16322 511 aa16.41■□□□□ 0.22
PDLIM7-211ENST00000504318 CCDC178Q5BJE1 867 aa16.41■□□□□ 0.22
PDLIM7-211ENST00000504318 NSMFQ6X4W1 530 aa16.41■□□□□ 0.22
PDLIM7-211ENST00000504318 TDHQ8IZJ6 230 aa16.41■□□□□ 0.22
PDLIM7-211ENST00000504318 MAP4K1Q92918 833 aa16.41■□□□□ 0.22
PDLIM7-211ENST00000504318 MTMR8Q96EF0 704 aa16.41■□□□□ 0.22
PDLIM7-211ENST00000504318 KRT23Q9C075 422 aa16.41■□□□□ 0.22
PDLIM7-211ENST00000504318 UBA5Q9GZZ9 404 aa16.41■□□□□ 0.22
PDLIM7-211ENST00000504318 CNNM2Q9H8M5 875 aa16.41■□□□□ 0.22
PDLIM7-211ENST00000504318 SENP2Q9HC62 589 aa16.41■□□□□ 0.22
PDLIM7-211ENST00000504318 PDGFCQ9NRA1 345 aa16.41■□□□□ 0.22
PDLIM7-211ENST00000504318 ATP11BQ9Y2G3 1177 aa16.41■□□□□ 0.22
PDLIM7-211ENST00000504318 MOXD2PA6NHM9 499 aa16.4■□□□□ 0.22
PDLIM7-211ENST00000504318 SMPD1P17405 629 aa16.4■□□□□ 0.22
PDLIM7-211ENST00000504318 EDNRBP24530 442 aa16.4■□□□□ 0.22
PDLIM7-211ENST00000504318 CDK7P50613 346 aa16.4■□□□□ 0.22
PDLIM7-211ENST00000504318 ALDH5A1P51649 535 aaPredicted RBP16.4■□□□□ 0.22
PDLIM7-211ENST00000504318 ANTXR2P58335 489 aa16.4■□□□□ 0.22
PDLIM7-211ENST00000504318 TLE2Q04725 743 aa16.4■□□□□ 0.22
PDLIM7-211ENST00000504318 ANKRD33Q7Z3H0 272 aa16.4■□□□□ 0.22
PDLIM7-211ENST00000504318 FBXO16Q8IX29 292 aaPredicted RBP16.4■□□□□ 0.22
PDLIM7-211ENST00000504318 STAG2Q8N3U4 1231 aa16.4■□□□□ 0.22
PDLIM7-211ENST00000504318 BAZ2BQ9UIF8 2168 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-211ENST00000504318 LOC102724159A0A0B4J2E5 919 aa16.39■□□□□ 0.21
PDLIM7-211ENST00000504318 RBM47A0AV96 593 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-211ENST00000504318 OPLAHO14841 1288 aa16.39■□□□□ 0.21
PDLIM7-211ENST00000504318 MYCNP04198 464 aaPredicted RBP16.39■□□□□ 0.21
PDLIM7-211ENST00000504318 RPS6P62753 249 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-211ENST00000504318 PWP2Q15269 919 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-211ENST00000504318 CDC37Q16543 378 aaPredicted RBP16.39■□□□□ 0.21
PDLIM7-211ENST00000504318 ASPRV1Q53RT3 343 aa16.39■□□□□ 0.21
PDLIM7-211ENST00000504318 ADGRF4Q8IZF3 695 aa16.39■□□□□ 0.21
PDLIM7-211ENST00000504318 RUFY2Q8WXA3 655 aa16.39■□□□□ 0.21
PDLIM7-211ENST00000504318 UBE2OQ9C0C9 1292 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-211ENST00000504318 LSG1Q9H089 658 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-211ENST00000504318 KAT14Q9H8E8 782 aa16.39■□□□□ 0.21
PDLIM7-211ENST00000504318 MAD2L2Q9UI95 211 aa16.39■□□□□ 0.21
PDLIM7-211ENST00000504318 E7EWF7 191 aa16.38■□□□□ 0.21
PDLIM7-211ENST00000504318 ASGR1P07306 291 aa16.38■□□□□ 0.21
PDLIM7-211ENST00000504318 FAAP100Q0VG06 881 aa16.38■□□□□ 0.21
PDLIM7-211ENST00000504318 MB21D2Q8IYB1 491 aaPredicted RBP16.38■□□□□ 0.21
PDLIM7-211ENST00000504318 RGS22Q8NE09 1264 aa16.38■□□□□ 0.21
PDLIM7-211ENST00000504318 TBC1D5Q92609 795 aa16.38■□□□□ 0.21
PDLIM7-211ENST00000504318 TOX2Q96NM4 488 aa16.38■□□□□ 0.21
PDLIM7-211ENST00000504318 JMJD4Q9H9V9 463 aa16.38■□□□□ 0.21
PDLIM7-211ENST00000504318 VTA1Q9NP79 307 aa16.38■□□□□ 0.21
PDLIM7-211ENST00000504318 ELP1O95163 1332 aa16.38■□□□□ 0.21
PDLIM7-211ENST00000504318 KIAA1217Q5T5P2 1943 aa16.37■□□□□ 0.21
PDLIM7-211ENST00000504318 COL6A3P12111 3177 aa16.37■□□□□ 0.21
PDLIM7-211ENST00000504318 SCN10AQ9Y5Y9 1956 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms