RNA–Protein interactions for RNA: ENST00000503180.5

DDR1-248, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-248ENST00000503180 MICU3Q86XE3 530 aa18.34■□□□□ 0.53
DDR1-248ENST00000503180 CCDC144CPQ8IYA2 1237 aa18.34■□□□□ 0.53
DDR1-248ENST00000503180 MTMR8Q96EF0 704 aa18.34■□□□□ 0.53
DDR1-248ENST00000503180 RRP36Q96EU6 259 aaKnown RBP18.34■□□□□ 0.53
DDR1-248ENST00000503180 MAML3Q96JK9 1138 aa18.34■□□□□ 0.53
DDR1-248ENST00000503180 SPZ1Q9BXG8 430 aa18.34■□□□□ 0.53
DDR1-248ENST00000503180 BRPF3Q9ULD4 1205 aa18.34■□□□□ 0.53
DDR1-248ENST00000503180 MRPL11Q9Y3B7 192 aaKnown RBP18.34■□□□□ 0.53
DDR1-248ENST00000503180 RPTORQ8N122 1335 aa18.33■□□□□ 0.53
DDR1-248ENST00000503180 DNAJC25-GNG10A0A024R161 153 aa18.33■□□□□ 0.52
DDR1-248ENST00000503180 CCL5P13501 91 aa18.33■□□□□ 0.52
DDR1-248ENST00000503180 RXRAP19793 462 aa18.33■□□□□ 0.52
DDR1-248ENST00000503180 APOBRQ0VD83 1088 aa18.33■□□□□ 0.52
DDR1-248ENST00000503180 MUM1L1Q5H9M0 696 aa18.33■□□□□ 0.52
DDR1-248ENST00000503180 NSMFQ6X4W1 530 aa18.33■□□□□ 0.52
DDR1-248ENST00000503180 HOMER1Q86YM7 354 aa18.33■□□□□ 0.52
DDR1-248ENST00000503180 MCF2L2Q86YR7 1114 aa18.33■□□□□ 0.52
DDR1-248ENST00000503180 MSL3Q8N5Y2 521 aaKnown RBP18.33■□□□□ 0.52
DDR1-248ENST00000503180 RGS22Q8NE09 1264 aa18.33■□□□□ 0.52
DDR1-248ENST00000503180 PIGSQ96S52 555 aa18.33■□□□□ 0.52
DDR1-248ENST00000503180 AGXT2Q9BYV1 514 aa18.33■□□□□ 0.52
DDR1-248ENST00000503180 UPF2Q9HAU5 1272 aaKnown RBP18.33■□□□□ 0.52
DDR1-248ENST00000503180 A1CFQ9NQ94 594 aaKnown RBP18.33■□□□□ 0.52
DDR1-248ENST00000503180 PDRG1Q9NUG6 133 aa18.33■□□□□ 0.52
DDR1-248ENST00000503180 SEC63Q9UGP8 760 aaKnown RBP18.33■□□□□ 0.52
DDR1-248ENST00000503180 PRKAR2AP13861 404 aaKnown RBP18.32■□□□□ 0.52
DDR1-248ENST00000503180 CAPN2P17655 700 aa18.32■□□□□ 0.52
DDR1-248ENST00000503180 CACNB2Q08289 660 aaPredicted RBP18.32■□□□□ 0.52
DDR1-248ENST00000503180 MTFR1Q15390 333 aa18.32■□□□□ 0.52
DDR1-248ENST00000503180 RTN1Q16799 776 aa18.32■□□□□ 0.52
DDR1-248ENST00000503180 IFFO2Q5TF58 517 aa18.32■□□□□ 0.52
DDR1-248ENST00000503180 ZNF467Q7Z7K2 595 aaPredicted RBP18.32■□□□□ 0.52
DDR1-248ENST00000503180 TINF2Q9BSI4 451 aa18.32■□□□□ 0.52
DDR1-248ENST00000503180 UPF3BQ9BZI7 483 aaKnown RBP18.32■□□□□ 0.52
DDR1-248ENST00000503180 CYP39A1Q9NYL5 469 aa18.32■□□□□ 0.52
DDR1-248ENST00000503180 FLRT1Q9NZU1 646 aa18.32■□□□□ 0.52
DDR1-248ENST00000503180 PCDHA1Q9Y5I3 950 aa18.32■□□□□ 0.52
DDR1-248ENST00000503180 PLXNB2O15031 1838 aa18.31■□□□□ 0.52
DDR1-248ENST00000503180 PTPDC1A2A3K4 754 aa18.31■□□□□ 0.52
DDR1-248ENST00000503180 GOLGA8AA7E2F4 631 aa18.31■□□□□ 0.52
DDR1-248ENST00000503180 GOLGA8BA8MQT2 603 aa18.31■□□□□ 0.52
DDR1-248ENST00000503180 CYTH3O43739 400 aa18.31■□□□□ 0.52
DDR1-248ENST00000503180 CYP2C19P33261 490 aa18.31■□□□□ 0.52
DDR1-248ENST00000503180 METAP2P50579 478 aaKnown RBP eCLIP18.31■□□□□ 0.52
DDR1-248ENST00000503180 RNF207Q6ZRF8 634 aa18.31■□□□□ 0.52
DDR1-248ENST00000503180 RAB11FIP4Q86YS3 637 aa18.31■□□□□ 0.52
DDR1-248ENST00000503180 SRBD1Q8N5C6 995 aaKnown RBP18.31■□□□□ 0.52
DDR1-248ENST00000503180 UNC93B1Q9H1C4 597 aa18.31■□□□□ 0.52
DDR1-248ENST00000503180 ADD3Q9UEY8 706 aaKnown RBP18.31■□□□□ 0.52
DDR1-248ENST00000503180 ZNFX1Q9P2E3 1918 aaKnown RBP18.3■□□□□ 0.52
DDR1-248ENST00000503180 NFIBO00712 420 aa18.3■□□□□ 0.52
DDR1-248ENST00000503180 GJB1P08034 283 aa18.3■□□□□ 0.52
DDR1-248ENST00000503180 EVCP57679 992 aa18.3■□□□□ 0.52
DDR1-248ENST00000503180 TRIM32Q13049 653 aa18.3■□□□□ 0.52
DDR1-248ENST00000503180 BAATQ14032 418 aaPredicted RBP18.3■□□□□ 0.52
DDR1-248ENST00000503180 ANKRD1Q15327 319 aa18.3■□□□□ 0.52
DDR1-248ENST00000503180 MAP3K21Q5TCX8 1036 aa18.3■□□□□ 0.52
DDR1-248ENST00000503180 TMTC3Q6ZXV5 915 aa18.3■□□□□ 0.52
DDR1-248ENST00000503180 CCDC82Q8N4S0 544 aa18.3■□□□□ 0.52
DDR1-248ENST00000503180 CLEC4DQ8WXI8 215 aa18.3■□□□□ 0.52
DDR1-248ENST00000503180 PIBF1Q8WXW3 757 aa18.3■□□□□ 0.52
DDR1-248ENST00000503180 IL17RAQ96F46 866 aa18.3■□□□□ 0.52
DDR1-248ENST00000503180 MPHOSPH6Q99547 160 aaKnown RBP18.3■□□□□ 0.52
DDR1-248ENST00000503180 ALDH8A1Q9H2A2 487 aaPredicted RBP18.3■□□□□ 0.52
DDR1-248ENST00000503180 ZNF236Q9UL36 1845 aa18.29■□□□□ 0.52
DDR1-248ENST00000503180 ASB14A6NK59 587 aa18.29■□□□□ 0.52
DDR1-248ENST00000503180 B4DLN1 442 aa18.29■□□□□ 0.52
DDR1-248ENST00000503180 PLEKHA8P1O95397 391 aa18.29■□□□□ 0.52
DDR1-248ENST00000503180 CNGA1P29973 690 aa18.29■□□□□ 0.52
DDR1-248ENST00000503180 MRPL12P52815 198 aaKnown RBP18.29■□□□□ 0.52
DDR1-248ENST00000503180 CNTN2Q02246 1040 aa18.29■□□□□ 0.52
DDR1-248ENST00000503180 MAMDC4Q6UXC1 1216 aa18.29■□□□□ 0.52
DDR1-248ENST00000503180 CMTR1Q8N1G2 835 aaKnown RBP18.29■□□□□ 0.52
DDR1-248ENST00000503180 SAMD3Q8N6K7 520 aa18.29■□□□□ 0.52
DDR1-248ENST00000503180 FAM133AQ8N9E0 248 aa18.29■□□□□ 0.52
DDR1-248ENST00000503180 ZNF274Q96GC6 653 aaPredicted RBP18.29■□□□□ 0.52
DDR1-248ENST00000503180 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.29■□□□□ 0.529e-6■■■■■ 32.4
DDR1-248ENST00000503180 MAP3K20Q9NYL2 800 aaKnown RBP18.29■□□□□ 0.52
DDR1-248ENST00000503180 NRBP1Q9UHY1 535 aa18.29■□□□□ 0.52
DDR1-248ENST00000503180 CNPY2Q9Y2B0 182 aa18.29■□□□□ 0.52
DDR1-248ENST00000503180 SYNGAP1Q96PV0 1343 aa18.28■□□□□ 0.52
DDR1-248ENST00000503180 IGHA2P01877 340 aa18.28■□□□□ 0.52
DDR1-248ENST00000503180 CALML3P27482 149 aa18.28■□□□□ 0.52
DDR1-248ENST00000503180 PDIA3P30101 505 aaKnown RBP18.28■□□□□ 0.52
DDR1-248ENST00000503180 SOX10P56693 466 aa18.28■□□□□ 0.52
DDR1-248ENST00000503180 TOB2Q14106 344 aaPredicted RBP18.28■□□□□ 0.52
DDR1-248ENST00000503180 SLC35G1Q2M3R5 365 aa18.28■□□□□ 0.52
DDR1-248ENST00000503180 C22orf23Q9BZE7 217 aa18.28■□□□□ 0.52
DDR1-248ENST00000503180 PAK6Q9NQU5 681 aaPredicted RBP18.28■□□□□ 0.52
DDR1-248ENST00000503180 LOC102724159A0A0B4J2E5 919 aa18.27■□□□□ 0.52
DDR1-248ENST00000503180 MSCO60682 206 aa18.27■□□□□ 0.52
DDR1-248ENST00000503180 SGPL1O95470 568 aa18.27■□□□□ 0.52
DDR1-248ENST00000503180 TFRCP02786 760 aaKnown RBP18.27■□□□□ 0.52
DDR1-248ENST00000503180 TAL1P17542 331 aaPredicted RBP18.27■□□□□ 0.52
DDR1-248ENST00000503180 ADD1P35611 737 aaKnown RBP18.27■□□□□ 0.52
DDR1-248ENST00000503180 GJA8P48165 433 aa18.27■□□□□ 0.52
DDR1-248ENST00000503180 NEK4P51957 841 aa18.27■□□□□ 0.52
DDR1-248ENST00000503180 RPS6P62753 249 aaKnown RBP18.27■□□□□ 0.52
DDR1-248ENST00000503180 PWP2Q15269 919 aaKnown RBP18.27■□□□□ 0.52
DDR1-248ENST00000503180 DEFB118Q96PH6 123 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms