RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 OXCT2Q9BYC2 517 aaPredicted RBP7.26□□□□□ -1.25
CLCN3-203ENST00000502998 VPS33BQ9H267 617 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 PRKRIP1Q9H875 184 aaPredicted RBP7.26□□□□□ -1.25
CLCN3-203ENST00000502998 EPB41L4AQ9HCS5 686 aaPredicted RBP7.26□□□□□ -1.25
CLCN3-203ENST00000502998 PCNTO95613 3336 aa7.26□□□□□ -1.25
CLCN3-203ENST00000502998 NHSQ6T4R5 1651 aa7.25□□□□□ -1.25
CLCN3-203ENST00000502998 TMEM238LA0A1B0GVL6 79 aa7.25□□□□□ -1.25
CLCN3-203ENST00000502998 LSM1O15116 133 aaKnown RBP7.25□□□□□ -1.25
CLCN3-203ENST00000502998 PDGFRBP09619 1106 aa7.25□□□□□ -1.25
CLCN3-203ENST00000502998 IL2RBP14784 551 aa7.25□□□□□ -1.25
CLCN3-203ENST00000502998 BTF3P20290 206 aaKnown RBP7.25□□□□□ -1.25
CLCN3-203ENST00000502998 FBLN1P23142 703 aa7.25□□□□□ -1.25
CLCN3-203ENST00000502998 SCNN1BP51168 640 aa7.25□□□□□ -1.25
CLCN3-203ENST00000502998 PMS2P54278 862 aa7.25□□□□□ -1.25
CLCN3-203ENST00000502998 BASP1P80723 227 aaKnown RBP7.25□□□□□ -1.25
CLCN3-203ENST00000502998 COG2Q14746 738 aa7.25□□□□□ -1.25
CLCN3-203ENST00000502998 SLC15A2Q16348 729 aa7.25□□□□□ -1.25
CLCN3-203ENST00000502998 CCDC93Q567U6 631 aa7.25□□□□□ -1.25
CLCN3-203ENST00000502998 THEMIS2Q5TEJ8 643 aa7.25□□□□□ -1.25
CLCN3-203ENST00000502998 EGFLAMQ63HQ2 1017 aa7.25□□□□□ -1.25
CLCN3-203ENST00000502998 SND1Q7KZF4 910 aaKnown RBP eCLIP7.25□□□□□ -1.25
CLCN3-203ENST00000502998 PPFIBP1Q86W92 1011 aa7.25□□□□□ -1.25
CLCN3-203ENST00000502998 MICALL2Q8IY33 904 aa7.25□□□□□ -1.25
CLCN3-203ENST00000502998 SYT2Q8N9I0 419 aaPredicted RBP7.25□□□□□ -1.25
CLCN3-203ENST00000502998 ZNF75CPQ92670 426 aaPredicted RBP7.25□□□□□ -1.25
CLCN3-203ENST00000502998 CLIP3Q96DZ5 547 aa7.25□□□□□ -1.25
CLCN3-203ENST00000502998 XAGE2Q96GT9 111 aa7.25□□□□□ -1.25
CLCN3-203ENST00000502998 CGREF1Q99674 301 aa7.25□□□□□ -1.25
CLCN3-203ENST00000502998 PARVGQ9HBI0 331 aa7.25□□□□□ -1.25
CLCN3-203ENST00000502998 ATXN10Q9UBB4 475 aa7.25□□□□□ -1.25
CLCN3-203ENST00000502998 TBK1Q9UHD2 729 aa7.25□□□□□ -1.25
CLCN3-203ENST00000502998 POLG2Q9UHN1 485 aa7.25□□□□□ -1.25
CLCN3-203ENST00000502998 BZW2Q9Y6E2 419 aaKnown RBP7.25□□□□□ -1.25
CLCN3-203ENST00000502998 USP47Q96K76 1375 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 A0A0B4J203 849 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 M0QX08 132 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 WDR46O15213 610 aaKnown RBP7.24□□□□□ -1.25
CLCN3-203ENST00000502998 BIRC5O15392 142 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 PPP1R12BO60237 982 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-203ENST00000502998 TSPAN1O60635 241 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 STAMBPO95630 424 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 HOXC13P31276 330 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 UBXN2AP68543 259 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 MRPL28Q13084 256 aaKnown RBP7.24□□□□□ -1.25
CLCN3-203ENST00000502998 CCDC153Q494R4 210 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 PLEKHO1Q53GL0 409 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-203ENST00000502998 CFAP157Q5JU67 520 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 CEP85LQ5SZL2 805 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 C10orf76Q5T2E6 689 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 FIP1L1Q6UN15 594 aaKnown RBP7.24□□□□□ -1.25
CLCN3-203ENST00000502998 SLC15A3Q8IY34 581 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 SYCP3Q8IZU3 236 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 LSMEM2Q8N112 164 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 LRRC43Q8N309 656 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 LILRB2Q8N423 598 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 RNF10Q8N5U6 811 aaKnown RBP7.24□□□□□ -1.25
CLCN3-203ENST00000502998 LINC00469Q8N7U9 141 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 TNIP2Q8NFZ5 429 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 GDAP1Q8TB36 358 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 IP6K1Q92551 441 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 ASIC4Q96FT7 647 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 LTV1Q96GA3 475 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-203ENST00000502998 ACSBG1Q96GR2 724 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 ZNF496Q96IT1 587 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-203ENST00000502998 COG3Q96JB2 828 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 SPACA7Q96KW9 195 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 SNX27Q96L92 541 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 RTFDC1Q9BY42 306 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-203ENST00000502998 MTFR1LQ9H019 292 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 SEMA4AQ9H3S1 761 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 CLK4Q9HAZ1 481 aaKnown RBP7.24□□□□□ -1.25
CLCN3-203ENST00000502998 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-203ENST00000502998 SATB2Q9UPW6 733 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 GJA3Q9Y6H8 435 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 MAP3K19Q56UN5 1328 aa7.24□□□□□ -1.25
CLCN3-203ENST00000502998 PAPPAQ13219 1627 aa7.23□□□□□ -1.25
CLCN3-203ENST00000502998 FAM208AQ9UK61 1670 aaKnown RBP7.23□□□□□ -1.25
CLCN3-203ENST00000502998 A0A1W2PRQ8 180 aa7.23□□□□□ -1.25
CLCN3-203ENST00000502998 TLDC2A0PJX2 215 aa7.23□□□□□ -1.25
CLCN3-203ENST00000502998 C2orf81A6NN90 581 aa7.23□□□□□ -1.25
CLCN3-203ENST00000502998 B4DLN1 442 aa7.23□□□□□ -1.25
CLCN3-203ENST00000502998 C19orf81C9J6K1 198 aa7.23□□□□□ -1.25
CLCN3-203ENST00000502998 STXBP3O00186 592 aa7.23□□□□□ -1.25
CLCN3-203ENST00000502998 FOXN3O00409 490 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-203ENST00000502998 CPLX1O14810 134 aa7.23□□□□□ -1.25
CLCN3-203ENST00000502998 PRC1O43663 620 aa7.23□□□□□ -1.25
CLCN3-203ENST00000502998 SNX2O60749 519 aa7.23□□□□□ -1.25
CLCN3-203ENST00000502998 SMNDC1O75940 238 aaKnown RBP eCLIP7.23□□□□□ -1.25
CLCN3-203ENST00000502998 CYP1A2P05177 515 aa7.23□□□□□ -1.25
CLCN3-203ENST00000502998 ATP5JP18859 108 aa7.23□□□□□ -1.25
CLCN3-203ENST00000502998 S100A1P23297 94 aa7.23□□□□□ -1.25
CLCN3-203ENST00000502998 CNGA1P29973 690 aa7.23□□□□□ -1.25
CLCN3-203ENST00000502998 ATP5DP30049 168 aa7.23□□□□□ -1.25
CLCN3-203ENST00000502998 HOXC9P31274 260 aa7.23□□□□□ -1.25
CLCN3-203ENST00000502998 PRKAR2BP31323 418 aa7.23□□□□□ -1.25
CLCN3-203ENST00000502998 HOXD12P35452 270 aa7.23□□□□□ -1.25
CLCN3-203ENST00000502998 PSMC4P43686 418 aa7.23□□□□□ -1.25
CLCN3-203ENST00000502998 TMF1P82094 1093 aa7.23□□□□□ -1.25
CLCN3-203ENST00000502998 CDK17Q00537 523 aa7.23□□□□□ -1.25
CLCN3-203ENST00000502998 DR1Q01658 176 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms