RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 HELLSQ9NRZ9 838 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 ADD3Q9UEY8 706 aaKnown RBP7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 ZHX1Q9UKY1 873 aaPredicted RBP7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 VCANP13611 3396 aa7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 MYADML2A6NDP7 307 aa7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 SOWAHBA6NEL2 793 aa7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 RAD21O60216 631 aa7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 PRDM1O75626 825 aa7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 MYCNP04198 464 aaPredicted RBP7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 ICAM1P05362 532 aa7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 FOSL2P15408 326 aa7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 MX1P20591 662 aa7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 RAB30Q15771 203 aa7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 TAPT1Q6NXT6 567 aa7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 RPUSD2Q8IZ73 545 aaKnown RBP7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 RGS22Q8NE09 1264 aa7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 ATXN2LQ8WWM7 1075 aaKnown RBP7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 MYLIPQ8WY64 445 aa7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 TIFAQ96CG3 184 aa7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 EVI5LQ96CN4 794 aa7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 TRERF1Q96PN7 1200 aa7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 RANBP17Q9H2T7 1088 aaKnown RBP7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 IL23AQ9NPF7 189 aa7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 RNF146Q9NTX7 359 aa7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 CYP39A1Q9NYL5 469 aa7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 PRR12Q9ULL5 1215 aa7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 ASTN1O14525 1302 aa7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 WDR19Q8NEZ3 1342 aa7.23□□□□□ -1.25
LSM3P4-201ENST00000502948 LAMA4Q16363 1823 aa7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 TANC1Q9C0D5 1861 aa7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 TSPY2A6NKD2 308 aa7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 NKRFO15226 690 aaKnown RBP eCLIP7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 KPNA6O60684 536 aa7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 SUPT20HL2P0C7V6 817 aa7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 SNHG28P0DPA3 235 aa7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 SMPD1P17405 629 aa7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 POU3F3P20264 500 aaPredicted RBP7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 PTPN11Q06124 597 aaPredicted RBP7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 ITGA7Q13683 1181 aa7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 GRIN2CQ14957 1233 aa7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 FSCN1Q16658 493 aaKnown RBP7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 DUSP28Q4G0W2 176 aa7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 TJAP1Q5JTD0 557 aa7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 SAMD1Q6SPF0 538 aaPredicted RBP7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 TLK2Q86UE8 772 aa7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 LRRC47Q8N1G4 583 aaKnown RBP7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 DNERQ8NFT8 737 aa7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 LENG1Q96BZ8 264 aaPredicted RBP7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 AGBL1Q96MI9 1066 aa7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 FAM161BQ96MY7 647 aa7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 SEC62Q99442 399 aaKnown RBP7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 MPHOSPH6Q99547 160 aaKnown RBP7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 FSD1Q9BTV5 496 aa7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 PBX4Q9BYU1 374 aa7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 AP5M1Q9H0R1 490 aa7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 POLR3EQ9NVU0 708 aa7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 STX8Q9UNK0 236 aa7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 KIAA1217Q5T5P2 1943 aa7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 SPTBN5Q9NRC6 3674 aaKnown RBP7.22□□□□□ -1.25
LSM3P4-201ENST00000502948 PRUNE2Q8WUY3 3088 aa7.21□□□□□ -1.25
LSM3P4-201ENST00000502948 MUC3AQ02505 3323 aa7.21□□□□□ -1.25
LSM3P4-201ENST00000502948 B4DLN1 442 aa7.21□□□□□ -1.26
LSM3P4-201ENST00000502948 PITPNM1O00562 1244 aa7.21□□□□□ -1.26
LSM3P4-201ENST00000502948 FGBP02675 491 aa7.21□□□□□ -1.26
LSM3P4-201ENST00000502948 TOP1P11387 765 aaKnown RBP7.21□□□□□ -1.26
LSM3P4-201ENST00000502948 CSF2RAP15509 400 aa7.21□□□□□ -1.26
LSM3P4-201ENST00000502948 MCCP23508 829 aa7.21□□□□□ -1.26
LSM3P4-201ENST00000502948 EDNRBP24530 442 aa7.21□□□□□ -1.26
LSM3P4-201ENST00000502948 RFC2P35250 354 aa7.21□□□□□ -1.26
LSM3P4-201ENST00000502948 CPT1AP50416 773 aa7.21□□□□□ -1.26
LSM3P4-201ENST00000502948 MRPL12P52815 198 aaKnown RBP7.21□□□□□ -1.26
LSM3P4-201ENST00000502948 CNTN2Q02246 1040 aa7.21□□□□□ -1.26
LSM3P4-201ENST00000502948 HDAC1Q13547 482 aaPredicted RBP7.21□□□□□ -1.26
LSM3P4-201ENST00000502948 ZNF365Q70YC5 407 aa7.21□□□□□ -1.26
LSM3P4-201ENST00000502948 GAS2L1Q99501 681 aaPredicted RBP7.21□□□□□ -1.26
LSM3P4-201ENST00000502948 NOC4LQ9BVI4 516 aaKnown RBP7.21□□□□□ -1.26
LSM3P4-201ENST00000502948 PCDHB15Q9Y5E8 787 aa7.21□□□□□ -1.26
LSM3P4-201ENST00000502948 GRIN2DO15399 1336 aa7.21□□□□□ -1.26
LSM3P4-201ENST00000502948 MYH6P13533 1939 aa7.21□□□□□ -1.26
LSM3P4-201ENST00000502948 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 A6NJR5 290 aa7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 PARNO95453 639 aaKnown RBP7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 FGAP02671 866 aa7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 ALAS1P13196 640 aa7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 ALDH5A1P51649 535 aaPredicted RBP7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 PURAQ00577 322 aaKnown RBP7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 MCMDC2Q4G0Z9 681 aa7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 BRDTQ58F21 947 aaPredicted RBP7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 CCDC178Q5BJE1 867 aa7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 MUM1L1Q5H9M0 696 aa7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 GPATCH4Q5T3I0 446 aaKnown RBP7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 TSHZ3Q63HK5 1081 aa7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 NFRKBQ6P4R8 1299 aa7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 CXCL17Q6UXB2 119 aa7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 KCTD1Q719H9 257 aa7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 DGKHQ86XP1 1220 aa7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 PHOSPHO2Q8TCD6 241 aa7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 ANKS1AQ92625 1134 aa7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 VTI1AQ96AJ9 217 aa7.2□□□□□ -1.26
LSM3P4-201ENST00000502948 ALDH8A1Q9H2A2 487 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms