RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 TBX3O15119 743 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 MNAT1P51948 309 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 COBLL1Q53SF7 1204 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 RTKN2Q8IZC4 609 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 PROM2Q8N271 834 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 CHURC1Q8WUH1 139 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 PAIP2Q9BPZ3 127 aaKnown RBP8.27□□□□□ -1.09
PDGFC-203ENST00000502773 KCNF1Q9H3M0 494 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 SENP2Q9HC62 589 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 MTMR4Q9NYA4 1195 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 SPDYE3A6NKU9 549 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 POLR3GO15318 223 aaPredicted RBP8.27□□□□□ -1.09
PDGFC-203ENST00000502773 KRT86O43790 486 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 CCNE1P24864 410 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 LRRC63Q05C16 580 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 VWA3BQ502W6 1294 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 PPP4R3AQ6IN85 833 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 PPP4R3CPQ6ZMV5 832 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 SAMD3Q8N6K7 520 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 C7orf25Q9BPX7 421 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 RIOX1Q9H6W3 641 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 MAD2L2Q9UI95 211 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 PCDHA6Q9UN73 950 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 PCDHA8Q9Y5H6 950 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 CCDC88AQ3V6T2 1871 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 STXBP3O00186 592 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 CTIFO43310 598 aaKnown RBP8.27□□□□□ -1.09
PDGFC-203ENST00000502773 CCDC172P0C7W6 258 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 RPL13P26373 211 aaKnown RBP8.27□□□□□ -1.09
PDGFC-203ENST00000502773 FXR2P51116 673 aaKnown RBP eCLIP8.27□□□□□ -1.09
PDGFC-203ENST00000502773 NCAPHQ15003 741 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 MAP9Q49MG5 647 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 ISM2Q6H9L7 571 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 OR8K1Q8NGG5 319 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 OXER1Q8TDS5 423 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 GOPCQ9HD26 462 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 INCENPQ9NQS7 918 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 MKRN1Q9UHC7 482 aaKnown RBP8.27□□□□□ -1.09
PDGFC-203ENST00000502773 HERC5Q9UII4 1024 aaKnown RBP8.27□□□□□ -1.09
PDGFC-203ENST00000502773 KCNG1Q9UIX4 513 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 SERPINA10Q9UK55 444 aa8.27□□□□□ -1.09
PDGFC-203ENST00000502773 CYP2D7A0A087X1C5 515 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 USP17L3A6NCW0 530 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 USP17L4A6NCW7 530 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 KCNJ18B7U540 433 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 EIF3JO75822 258 aaKnown RBP8.26□□□□□ -1.09
PDGFC-203ENST00000502773 RHOBTB3O94955 611 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 ZNF76P36508 570 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 SLC1A4P43007 532 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 PDE4DQ08499 809 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 KCNJ12Q14500 433 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 NR1I3Q14994 352 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 IFI16Q16666 785 aaKnown RBP8.26□□□□□ -1.09
PDGFC-203ENST00000502773 CERKLQ49MI3 558 aaPredicted RBP8.26□□□□□ -1.09
PDGFC-203ENST00000502773 TMCO3Q6UWJ1 677 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 C3orf67Q6ZVT6 689 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 USP17L1Q7RTZ2 530 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 CCDC170Q8IYT3 715 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 CNKSR2Q8WXI2 1034 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 TNFRSF25Q93038 417 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 PSTPIP2Q9H939 334 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 TRMT1Q9NXH9 659 aaKnown RBP8.26□□□□□ -1.09
PDGFC-203ENST00000502773 CTNND2Q9UQB3 1225 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 EFCAB8A8MWE9 144 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 ZBTB5O15062 677 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 URI1O94763 535 aaPredicted RBP8.26□□□□□ -1.09
PDGFC-203ENST00000502773 GNG11P61952 73 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 CCZ1BP86790 482 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 CCZ1P86791 482 aaPredicted RBP8.26□□□□□ -1.09
PDGFC-203ENST00000502773 ATP2B2Q01814 1243 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 UBXN1Q04323 297 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 INF2Q27J81 1249 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 NYAP1Q6ZVC0 841 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 C2CD5Q86YS7 1000 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 VTI1AQ96AJ9 217 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 AMNQ9BXJ7 453 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 OGFRQ9NZT2 677 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 NRBP1Q9UHY1 535 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 DAGLAQ9Y4D2 1042 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 MYH15Q9Y2K3 1946 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 CTAGE9A4FU28 777 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 LRRC10BA6NIK2 292 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 POLRMTO00411 1230 aaKnown RBP8.26□□□□□ -1.09
PDGFC-203ENST00000502773 APBA3O96018 575 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 ZNF18P17022 549 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 COPB1P53618 953 aaKnown RBP8.26□□□□□ -1.09
PDGFC-203ENST00000502773 PICALMQ13492 652 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 LRCH2Q5VUJ6 765 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 CMTR1Q8N1G2 835 aaKnown RBP8.26□□□□□ -1.09
PDGFC-203ENST00000502773 CSGALNACT2Q8N6G5 542 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 PPP1R13BQ96KQ4 1090 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 ZDHHC15Q96MV8 337 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 HAUS4Q9H6D7 363 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 VAT1LQ9HCJ6 419 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 GJB4Q9NTQ9 266 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 PPP2R2CQ9Y2T4 447 aa8.26□□□□□ -1.09
PDGFC-203ENST00000502773 MUTP22033 750 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 LRMPQ12912 555 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 VPS36Q86VN1 386 aa8.25□□□□□ -1.09
PDGFC-203ENST00000502773 FAM184BQ9ULE4 1060 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms