RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 PP2D1A8MPX8 630 aa20.69■□□□□ 0.9
LINC00535-201ENST00000501400 TMEM232C9JQI7 657 aa20.69■□□□□ 0.9
LINC00535-201ENST00000501400 PTMAP06454 111 aaKnown RBP20.69■□□□□ 0.9
LINC00535-201ENST00000501400 OR52Z1P0C646 297 aa20.69■□□□□ 0.9
LINC00535-201ENST00000501400 ORC2Q13416 577 aaPredicted RBP20.69■□□□□ 0.9
LINC00535-201ENST00000501400 SAMD7Q7Z3H4 446 aa20.69■□□□□ 0.9
LINC00535-201ENST00000501400 SNAP25P60880 206 aa20.68■□□□□ 0.9
LINC00535-201ENST00000501400 MORC3Q14149 939 aa20.68■□□□□ 0.9
LINC00535-201ENST00000501400 POTEDQ86YR6 584 aa20.68■□□□□ 0.9
LINC00535-201ENST00000501400 SMARCE1Q969G3 411 aa20.68■□□□□ 0.9
LINC00535-201ENST00000501400 GJA3Q9Y6H8 435 aa20.68■□□□□ 0.9
LINC00535-201ENST00000501400 CASP1P29466 404 aa20.68■□□□□ 0.9
LINC00535-201ENST00000501400 MTRQ99707 1265 aa20.68■□□□□ 0.9
LINC00535-201ENST00000501400 TRIM5Q9C035 493 aa20.68■□□□□ 0.9
LINC00535-201ENST00000501400 HSD3B7Q9H2F3 369 aa20.68■□□□□ 0.9
LINC00535-201ENST00000501400 ZKSCAN5Q9Y2L8 839 aa20.68■□□□□ 0.9
LINC00535-201ENST00000501400 PCDHA1Q9Y5I3 950 aa20.68■□□□□ 0.9
LINC00535-201ENST00000501400 SMCHD1A6NHR9 2005 aa20.67■□□□□ 0.9
LINC00535-201ENST00000501400 PHF20L1A8MW92 1017 aa20.67■□□□□ 0.9
LINC00535-201ENST00000501400 SLC37A4O43826 429 aa20.67■□□□□ 0.9
LINC00535-201ENST00000501400 TDP2O95551 362 aa20.67■□□□□ 0.9
LINC00535-201ENST00000501400 AFMP43652 599 aa20.67■□□□□ 0.9
LINC00535-201ENST00000501400 TNNI2P48788 182 aa20.67■□□□□ 0.9
LINC00535-201ENST00000501400 DPYDQ12882 1025 aa20.67■□□□□ 0.9
LINC00535-201ENST00000501400 TBC1D10BQ4KMP7 808 aaPredicted RBP20.67■□□□□ 0.9
LINC00535-201ENST00000501400 GLIS2Q9BZE0 524 aaPredicted RBP20.67■□□□□ 0.9
LINC00535-201ENST00000501400 PSTPIP2Q9H939 334 aa20.67■□□□□ 0.9
LINC00535-201ENST00000501400 CNOT7Q9UIV1 285 aaKnown RBP20.67■□□□□ 0.9
LINC00535-201ENST00000501400 IKBKBO14920 756 aa20.66■□□□□ 0.9
LINC00535-201ENST00000501400 MRPL12P52815 198 aaKnown RBP20.66■□□□□ 0.9
LINC00535-201ENST00000501400 KARSQ15046 597 aaKnown RBP20.66■□□□□ 0.9
LINC00535-201ENST00000501400 CCDC84Q86UT8 332 aaPredicted RBP20.66■□□□□ 0.9
LINC00535-201ENST00000501400 IQUBQ8NA54 791 aa20.66■□□□□ 0.9
LINC00535-201ENST00000501400 TAL1P17542 331 aaPredicted RBP20.66■□□□□ 0.9
LINC00535-201ENST00000501400 TNFAIP1Q13829 316 aa20.66■□□□□ 0.9
LINC00535-201ENST00000501400 NAALADL2Q58DX5 795 aa20.66■□□□□ 0.9
LINC00535-201ENST00000501400 TRIML1Q8N9V2 468 aa20.66■□□□□ 0.9
LINC00535-201ENST00000501400 SPC24Q8NBT2 197 aa20.66■□□□□ 0.9
LINC00535-201ENST00000501400 MTMR9Q96QG7 549 aa20.66■□□□□ 0.9
LINC00535-201ENST00000501400 PYM1Q9BRP8 204 aaKnown RBP20.66■□□□□ 0.9
LINC00535-201ENST00000501400 GOPCQ9HD26 462 aa20.66■□□□□ 0.9
LINC00535-201ENST00000501400 DISC1Q9NRI5 854 aa20.66■□□□□ 0.9
LINC00535-201ENST00000501400 PRR12Q9ULL5 1215 aa20.66■□□□□ 0.9
LINC00535-201ENST00000501400 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.66■□□□□ 0.9
LINC00535-201ENST00000501400 SBF1O95248 1867 aa20.65■□□□□ 0.9
LINC00535-201ENST00000501400 USP17L15C9J2P7 530 aa20.65■□□□□ 0.9
LINC00535-201ENST00000501400 USP17L13C9JLJ4 530 aa20.65■□□□□ 0.9
LINC00535-201ENST00000501400 USP17L11C9JVI0 530 aa20.65■□□□□ 0.9
LINC00535-201ENST00000501400 USP17L18D6R9N7 530 aa20.65■□□□□ 0.9
LINC00535-201ENST00000501400 USP17L22D6RA61 530 aa20.65■□□□□ 0.9
LINC00535-201ENST00000501400 USP17L17D6RBQ6 530 aa20.65■□□□□ 0.9
LINC00535-201ENST00000501400 USP17L19D6RCP7 530 aa20.65■□□□□ 0.9
LINC00535-201ENST00000501400 USP17L20D6RJB6 530 aa20.65■□□□□ 0.9
LINC00535-201ENST00000501400 USP17L24Q0WX57 530 aa20.65■□□□□ 0.9
LINC00535-201ENST00000501400 IKQ13123 557 aaPredicted RBP20.65■□□□□ 0.9
LINC00535-201ENST00000501400 KIF4BQ2VIQ3 1234 aa20.65■□□□□ 0.9
LINC00535-201ENST00000501400 FAM83BQ5T0W9 1011 aa20.65■□□□□ 0.9
LINC00535-201ENST00000501400 USP17L6PQ6QN14 398 aa20.65■□□□□ 0.9
LINC00535-201ENST00000501400 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.65■□□□□ 0.9
LINC00535-201ENST00000501400 LRRC15Q8TF66 581 aa20.65■□□□□ 0.9
LINC00535-201ENST00000501400 AMNQ9BXJ7 453 aa20.65■□□□□ 0.9
LINC00535-201ENST00000501400 CCSER1Q9C0I3 900 aa20.65■□□□□ 0.9
LINC00535-201ENST00000501400 VCPKMTQ9H867 229 aa20.65■□□□□ 0.9
LINC00535-201ENST00000501400 HACL1Q9UJ83 578 aa20.65■□□□□ 0.9
LINC00535-201ENST00000501400 TXLNAP40222 546 aa20.65■□□□□ 0.9
LINC00535-201ENST00000501400 STAMQ92783 540 aa20.65■□□□□ 0.9
LINC00535-201ENST00000501400 CCDC34Q96HJ3 373 aa20.65■□□□□ 0.9
LINC00535-201ENST00000501400 P2RX7Q99572 595 aaKnown RBP20.65■□□□□ 0.9
LINC00535-201ENST00000501400 MEIS2O14770 477 aa20.64■□□□□ 0.89
LINC00535-201ENST00000501400 ASNSP08243 561 aa20.64■□□□□ 0.89
LINC00535-201ENST00000501400 CDC25BP30305 580 aa20.64■□□□□ 0.89
LINC00535-201ENST00000501400 STAT2P52630 851 aa20.64■□□□□ 0.89
LINC00535-201ENST00000501400 FBXO11Q86XK2 927 aa20.64■□□□□ 0.89
LINC00535-201ENST00000501400 MRFAP1L1Q96HT8 127 aa20.64■□□□□ 0.89
LINC00535-201ENST00000501400 AK8Q96MA6 479 aa20.64■□□□□ 0.89
LINC00535-201ENST00000501400 OPLAHO14841 1288 aa20.63■□□□□ 0.89
LINC00535-201ENST00000501400 SMC2O95347 1197 aa20.63■□□□□ 0.89
LINC00535-201ENST00000501400 MYL5Q02045 173 aa20.63■□□□□ 0.89
LINC00535-201ENST00000501400 PPP4R3AQ6IN85 833 aa20.63■□□□□ 0.89
LINC00535-201ENST00000501400 IGSF22Q8N9C0 903 aa20.63■□□□□ 0.89
LINC00535-201ENST00000501400 GLT8D2Q9H1C3 349 aa20.63■□□□□ 0.89
LINC00535-201ENST00000501400 DOCK1Q14185 1865 aa20.63■□□□□ 0.89
LINC00535-201ENST00000501400 SMTNL1A8MU46 457 aa20.63■□□□□ 0.89
LINC00535-201ENST00000501400 CLCN1P35523 988 aa20.63■□□□□ 0.89
LINC00535-201ENST00000501400 STAT6P42226 847 aa20.63■□□□□ 0.89
LINC00535-201ENST00000501400 ZYXQ15942 572 aaKnown RBP20.63■□□□□ 0.89
LINC00535-201ENST00000501400 CALCRLQ16602 461 aa20.63■□□□□ 0.89
LINC00535-201ENST00000501400 USH1GQ495M9 461 aa20.63■□□□□ 0.89
LINC00535-201ENST00000501400 MLKLQ8NB16 471 aa20.63■□□□□ 0.89
LINC00535-201ENST00000501400 ZNF830Q96NB3 372 aaPredicted RBP20.63■□□□□ 0.89
LINC00535-201ENST00000501400 UBA7P41226 1012 aa20.62■□□□□ 0.89
LINC00535-201ENST00000501400 FMR1Q06787 632 aaKnown RBP eCLIP20.62■□□□□ 0.89
LINC00535-201ENST00000501400 ANO3Q9BYT9 981 aa20.62■□□□□ 0.89
LINC00535-201ENST00000501400 BLZF1Q9H2G9 400 aa20.62■□□□□ 0.89
LINC00535-201ENST00000501400 TTC12Q9H892 705 aaPredicted RBP20.62■□□□□ 0.89
LINC00535-201ENST00000501400 GTPBP6O43824 516 aaPredicted RBP20.61■□□□□ 0.89
LINC00535-201ENST00000501400 TECP42680 631 aa20.61■□□□□ 0.89
LINC00535-201ENST00000501400 CUL4BQ13620 913 aa20.61■□□□□ 0.89
LINC00535-201ENST00000501400 CRYGNQ8WXF5 182 aa20.61■□□□□ 0.89
LINC00535-201ENST00000501400 GSDMAQ96QA5 445 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms